# PARAMETER SETTINGS for TRAINING DATA collection:
#	MINIMUM PROTEIN PROBABILITY	0
#	MINIMUM SPECTRAL COUNT per PROTEIN	0
#	MINIMUM PEPTIDE PROBABILITY	1
#	MINIMUM SPECTRAL COUNT per PEPTIDE	10
#	ALLOW DEGENERATE PROTEINS or PEPTIDES	N
# PROTEINS OBSERVED in TRAINING DATA	412
# TOTAL OBSERVED PEPTIDES in TRAINING DATA	1447

# IN TRAINING ARFF:
# PROTEINS	412
# OBSERVED PEPTIDES	1447	FRACTION	0.0236264184831415
# NON-OBSERVED PEPTIDES	59798	FRACTION	0.976373581516858