# PARAMETER SETTINGS for TRAINING DATA collection:
#	MINIMUM PROTEIN PROBABILITY	1
#	MINIMUM SPECTRAL COUNT per PROTEIN	0
#	MINIMUM PEPTIDE PROBABILITY	1
#	MINIMUM SPECTRAL COUNT per PEPTIDE	30
#	ALLOW DEGENERATE PROTEINS or PEPTIDES	N
# PROTEINS OBSERVED in TRAINING DATA	102
# TOTAL OBSERVED PEPTIDES in TRAINING DATA	258

# IN TRAINING ARFF:
# PROTEINS	102
# OBSERVED PEPTIDES	258	FRACTION	0.0209653827401268
# NON-OBSERVED PEPTIDES	12048	FRACTION	0.979034617259873