#FILE	./sc_JohnYeast8_CATSHUFF_all.prot.xml
#PROTEIN	Number	Name	Probability	Total peptide counts	Unique peptides	No. indistinguishable proteins	Peptides	Degenerate Proteins	Annotation
# DATABASE	/project/marcotte/marcotte/ms/database/SCall_20060414_clean_CAT_SHUFF_1.fasta
# CUTOFF	PROBABILITY	0.00	FPR	0.705
# CUTOFF	PROBABILITY	0.10	FPR	0.187
# CUTOFF	PROBABILITY	0.20	FPR	0.187
# CUTOFF	PROBABILITY	0.30	FPR	0.136
# CUTOFF	PROBABILITY	0.40	FPR	0.102
# CUTOFF	PROBABILITY	0.50	FPR	0.076
# CUTOFF	PROBABILITY	0.60	FPR	0.055
# CUTOFF	PROBABILITY	0.70	FPR	0.037
# CUTOFF	PROBABILITY	0.80	FPR	0.021
# CUTOFF	PROBABILITY	0.90	FPR	0.009
# CUTOFF	PROBABILITY	0.95	FPR	0.004
# CUTOFF	PROBABILITY	0.96	FPR	0.003
# CUTOFF	PROBABILITY	0.97	FPR	0.002
# CUTOFF	PROBABILITY	0.98	FPR	0.002
# CUTOFF	PROBABILITY	0.99	FPR	0.001
# CUTOFF	PROBABILITY	1.00	FPR	0.000
# UPPER PROB, LOWER PROB, UPPER FPR, LOWER FPR	0.90	0.80	0.021	0.009
# PROBABILITY CUT (0.01 FDR)	0.8916
# UPPER PROB, LOWER PROB, UPPER FPR, LOWER FPR	0.90	0.80	0.021	0.009
# PROBABILITY CUT (0.01 FDR)	0.8916
# TOTAL NUMBER OF (CONTRIBUTING) PEPTIDE COUNTS	74588
# TOTAL NUMBER OF (CONTRIBUTING) PEPTIDE COUNTS	12467
# PROTEIN	Number	Name	Probability	Contributing_spectral_counts	All_unique_peptides	No._indistinguishable_proteins	Peptides	Degenerate Proteins	Annotation
#	PEPTIDE	Protein_Name	PeptideSequence_Charge	Degenerate?	Spectral counts	Contributing?	Adjusted NPS prob	Weight_(degeneracy)
# DATA
PROTEIN	1	YDR395W	1.0000	15	5	1	DLASNLVEQFLR EAEQQLFEFQK EGSTPDAASADFIFLIGSK LNNILPFINDIFTR NCENNHIRPILTETINGILVGQEDWDLAPIIK	YDR395W	SXM1 SGDID:S000002803,'Nuclear transport factor (karyopherin) involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1', Chr IV from 1263316-1266150, Verified ORF
PROTEIN	2	YCL050C	1.0000	69	5	1	FPVIPEHTLLVTNEYQHQTDALTPTDLLTAYK GQTPEGEDPLGKPEEELTVIPEFGGADNK HLQILQMPEK HMVFYNSGPASGSSLDHK TSMPYLISHMPSLIEKPER	YCL050C	APA1 SGDID:S000000555,'Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase I (AP4A phosphorylase), involved in catabolism of bis(5'-nucleosidyl) tetraphosphates; has similarity to Apa2p', Chr III from 38801-37836, reverse complement, Verified ORF
PROTEIN	3	YJL200C	0.9999	12	4	1	AGSAINYIGNIR DKFYPEMDPKPDSNVEIK IPFFVTPGSEQIR LQLLEPFKPWNGK	YJL200C	ACO2 SGDID:S000003736,'Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol', Chr X from 58813-56444, reverse complement, Uncharacterized ORF
PROTEIN	4	YDL202W	0.9974	5	2	1	GPTATITYEDTNPQQVAK HPLLPLLK	YDL202W	MRPL11 SGDID:S000002361,'Mitochondrial ribosomal protein of the large subunit', Chr IV from 98476-99225, Verified ORF
PROTEIN	5	YPR124W	1.0000	9	3	1	HPEPSPDPIAVADTTSGSDQSTR LQEQSGNMDQNLLPAEK TVASSMASMSMDAMSSASK	YPR124W	CTR1 SGDID:S000006328,'High-affinity copper transporter of the plasma membrane, mediates nearly all copper uptake under low copper conditions; transcriptionally induced at low copper levels and degraded at high copper levels', Chr XVI from 786204-787424, Verified ORF
PROTEIN	6	YGR240C	1.0000	310	25	1	AFVVEVMGR AVLEFTPETPSPLIGILENK DAFLEATSEDEIISR DPMGNNITFSGLANATDSAPTSK ELSWIDVENWHNLGGSEIGTNR EVWLESFK FKHGENSLLSSGTSQDSLR GFEVHWAEYNK GWLSEGGTLIGTAR HEWPSLVDELVAEGR HGENSLLSSGTSQDSLR IAVMTSGGDSPGMNAAVR IDLASIREDITLLK KMAWEDVRGWLSEGGTLIGTAR LNIGIVHVGAPSAALNAATR LSDTLVFLK LSDTLVFLKDPMGNNITFSGLANATDSAPTSK LSEVDASGFR NEQASSVYSTQLLADIISEASK NNTIIVAEGALDDQLNPVTANDVK RNNTIIVAEGALDDQLNPVTANDVK SIITNDEALFK SVASEDLGTIAYYFQK TIHFYHTLGFATVK WLATLQGVDAVK	YGR240C	PFK1 SGDID:S000003472,'Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes', Chr VII from 973739-970776, reverse complement, Verified ORF
PROTEIN	7	YER052C	0.9999	15	4	1	FGGTSVGKFPVQIVDDIVK FILNPALQAK FPVQIVDDIVK KGESTPPHPPENLSSSFYEK	YER052C	HOM3 SGDID:S000000854,'Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis', Chr V from 257957-256374, reverse complement, Verified ORF
PROTEIN	8	YPR187W	1.0000	12	2	1	ALQISMNAPVFVDLEGETDPLR TIVTGGNGPEDFQQHEQIR	YPR187W	RPO26 SGDID:S000006391,'RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit', Chr XVI from 911253-911272,911349-911796, Verified ORF
PROTEIN	9	YMR296C	0.9999	4	5	1	FIEPYEEEEK KFIVTEGIFHNSGDLAPLPELTK MAHIPEVLPK RGDVIVADDQVSLPVQNALQLSR YTNVFNLASNNFLQLSATEPVKEVVK	YMR296C	LCB1 SGDID:S000004911,'Component of serine palmitoyltransferase, responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine', Chr XIII from 860890-859214, reverse complement, Verified ORF
PROTEIN	10	YDR232W	0.9505	1	1	1	HQIYVQAINFPTVAR	YDR232W	HEM1 SGDID:S000002640,'5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p', Chr IV from 927448-929094, Verified ORF
PROTEIN	11	YNL134C	1.0000	7	4	1	FAIGDYIYGVIHGASVR FPSNGAFAEYSAISSETAYKPAR QDIPIPELEEGFVLIK TVAVAGNPTDWK	YNL134C	YNL134C SGDID:S000005078, Chr XIV from 373583-372453, reverse complement, Uncharacterized ORF
PROTEIN	12	YDL095W	1.0000	22	6	1	IFKDTEGNELDPEVVKK MLEEEGANILK NLVEPHVYESQPTSWPFLLR QGPVRPFIVTDPSAELASLR RVEQDDPVPELDIK VVNFHVQVIHYLLGFAVHYAPSFLMQR	YDL095W	PMT1 SGDID:S000002253,'Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt2p, can instead interact with Pmt3p in some conditions; target for new antifungals', Chr IV from 287059-289512, Verified ORF
PROTEIN	13	YOR323C	1.0000	61	9	1	ANAHAIEEANKIDLAVAK GDGQVASDYLGAGGNK GDKFEVMLQGIK GPVGLDGLVSYQYQIR GVDSSGVYWNASTR IVNDTIAQFQSETGVPVGSVQLIETR QDVSDLLDQDEYIDLVVPR TVDADEEQDFDKEFLSLDLAAK YGFGAEVGISTSK	YOR323C	PRO2 SGDID:S000005850,'Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis', Chr XV from 922902-921532, reverse complement, Verified ORF
PROTEIN	14	YMR183C	0.9591	6	1	1	SLDDYISQATDLQYQLK	YMR183C	SSO2 SGDID:S000004795,'Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane; syntaxin homolog that is functionally redundant with Sso1p', Chr XIII from 627807-626920, reverse complement, Verified ORF
PROTEIN	15	YPL063W	1.0000	18	5	1	DYVEGNLPSPEEQMK FPLDLIHEEGQK IQQEQMGGQTFTLK LIPFLEYLATQQTK VIIIDTDPNSYK	YPL063W	TIM50 SGDID:S000005984,'Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex); may promote binding of incoming precursor proteins to the intermembrane space domain of Tom22p during translocation', Chr XVI from 429936-431366, Verified ORF
PROTEIN	16	YNR016C	1.0000	266	43	1	ADVDAVWAGWGHASENPLLPEK AGVLEPQGMVGIK AIQVEGQPIILTGAPAINK ALINNVSGYVIK AVSVSDLSYVANSQSSPLR DLDKVALTVLSHSK DLLQTMFPVDFIHEGK DLLQTMFPVDFIHEGKR EILDLNKQELINASIR FQLPSAAFSTFPTVK GSFFETLSGWAK HALPFEGMLPDFGSPVIEGTKPAYK HTELPGHFIGLNTVDK HTELPGHFIGLNTVDKLEESPLR IGFPVMIK IGSFGPQEDEFFNK IIIKDPQTGAPVPLR ITSEDPNDGFKPSGGTLHELNFR IVEWMSYVPAK LDEQMEELVAR LESFAQDLAK LGGIPLGVIGVETR LLETEDFEDNTITTGWLDDLITHK LLGAVVEPLADIAHK LPAKLDEQMEELVAR LQVEHPTTEMVSGVNLPAAQLQIAMGIPMHR LSNFNIKPIFTDNR LSVDSMTTLLEVENDPTQLR MEYEITNYSER NNLILAILK NPEYNPDKLLGAVVEPLADIAHK PGSMHLRPIATPYPVK QPGSTIVAGDIMAIMTLDDPSK QVATWIEENYK SDHDNAIDGLSEVIK SLGKPGSMHLRPIATPYPVK SLVSTLENILK TGLVSVDDDIYQK TVENLIPADPANPNSAETLIQEPGQVWHPNSAFK VHEGVTVPIVEWK VIFIGPPGNAMR VSAIFSTPLQHIVELESK YYTFNGPNYNENETIR	YNR016C	ACC1 SGDID:S000005299,'Acetyl-CoA carboxylase, biotin containing enzyme that catalyzes the carboxylation of acetyl-CoA to form malonyl-CoA; required for de novo biosynthesis of long-chain fatty acids', Chr XIV from 661376-654675, reverse complement, Verified ORF
PROTEIN	17	YMR315W	1.0000	16	3	1	AGKPVILEKPIAANLDQAK HLPSYQEFPDKFK IGPVVAFTHNSTGPFVTQNK	YMR315W	YMR315W SGDID:S000004932,'Hypothetical protein', Chr XIII from 902799-903848, Uncharacterized ORF
PROTEIN	18	YDR035W	1.0000	8	3	1	ELASGLSFPIGFK GLINDPDMNNSFQINK IKGYDPLTPPDLLQHEFPISAK	YDR035W	ARO3 SGDID:S000002442,'3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by phenylalanine', Chr IV from 521813-522925, Verified ORF
PROTEIN	19	YER151C	1.0000	9	6	1	FSEYELLPFK IPVHSIIPR NKDVENKIPVHSIIPR PFIDVINVLSTRNTNSR QASNKTVSGSMVTK WHSNGITNNNGSSGNQGANSSGSGMSYNK	YER151C	UBP3 SGDID:S000000953,'Ubiquitin-specific protease that interacts with Bre5p to co-regulate anterograde and retrograde transport between endoplasmic reticulum and Golgi compartments; inhibitor of gene silencing; cleaves ubiquitin fusions but not polyubiquitin', Chr V from 472419-469681, reverse complement, Verified ORF
PROTEIN	20	YPR190C	0.9361	1	2	1	DPLTQTGLLQDLEEAKSFQDEAELVEEK TPGLTFNAIDLAR	YPR190C	RPC82 SGDID:S000006394,'RNA polymerase III subunit C82', Chr XVI from 919037-917073, reverse complement, Verified ORF
PROTEIN	21	YDR353W	1.0000	119	10	1	EQSTKFGTEIITETVSKVDLSSK FGTEIITETVSK GISACAVCDGAVPIFR IEILYNTVALEAK IVAGQVDTDEAGYIK KNEETDLPVSGLFYAIGHTPATK LWTEFNEDAEPVTTDAIILATGASAK MHLPGEETYWQK TVPGSSLTSVPGFFAAGDVQDSK VTIIGSGPAAHTAAIYLAR	YDR353W	TRR1 SGDID:S000002761,'Cytoplasmic thioredoxin reductase, key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress', Chr IV from 1183292-1184251, Verified ORF
PROTEIN	22	YKL214C	0.9562	2	1	1	IPLDVSDYTLDDMIK	YKL214C	YRA2 SGDID:S000001697,'Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus', Chr XI from 31694-31083, reverse complement, Verified ORF
PROTEIN	23	YDL125C	1.0000	30	4	1	LHDIPDEFLTDAMPIAK SGLIVGWPAQETDFDK SGLIVGWPAQETDFDKLGK YSYAFLDIQPTAEGHALIIPK	YDL125C	HNT1 SGDID:S000002283,'Adenosine 5'-monophosphoramidase; interacts physically and genetically with Kin28p, a CDK and TFIIK subunit, and genetically with CAK1; member of the histidine triad (HIT) superfamily of nucleotide-binding proteins and similar to Hint', Chr IV from 239606-239510,239398-239019, reverse complement, Verified ORF
PROTEIN	24	YLR078C	0.9804	2	2	1	DKLVFWIALILLIIGIYYVLK LVFWIALILLIIGIYYVLKWLR	YLR078C	BOS1 SGDID:S000004068,'v-SNARE (vesicle specific SNAP receptor), localized to the endoplasmic reticulum membrane and necessary for vesicular transport from the ER to the Golgi', Chr XII from 286560-286558,286468-285737, reverse complement, Verified ORF
PROTEIN	25	YIL053W	1.0000	234	12	1	FAPDFADEEYVNK FAPDFADEEYVNKLEGEIPEK FAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVK IKRPEYFITANDVK IVGIATTFDLDFLK KWFDILK LEGEIPEKYGEHSIEVPGAVK NGLGFPINEQDPSK NHESIRVGEYNAETDEVELIFDDYLYAKDDLLK RPEYFITANDVK VVVFEDAPAGIAAGK YGEHSIEVPGAVK	YIL053W	RHR2 SGDID:S000001315,'Constitutively expressed isoform of DL-glycerol-3-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and, along with the Hor2p/Gpp2p isoform, osmotic stress', Chr IX from 255113-255865, Verified ORF
PROTEIN	26	YDR258C	1.0000	4	2	1	SKDGDKVNLLHDSVTSDDISK VVGQDEAIAAISDAVR	YDR258C	HSP78 SGDID:S000002666,'Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded matrix proteins; component of the mitochondrial proteolysis system', Chr IV from 974239-971804, reverse complement, Verified ORF
PROTEIN	27	YNL243W	1.0000	8	7	1	AVAGATNVLITTASK EVAASTIQLVAASR LPVDAPDVFLINDVDESK PLLSLALMIIDAVVALVK QLANKDEQLTALQDQLDVWER SLGNHVMGMIEDDHSTSQQQQPLDFTSEHTLK VQQLESEITTMDSTASK	YNL243W	SLA2 SGDID:S000005187,'Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization; adaptor protein that links actin to clathrin and endocytosis; present in the actin cortical patch of the emerging bud tip; dimer in vivo', Chr XIV from 188052-190958, Verified ORF
PROTEIN	28	YMR039C	0.9999	10	3	1	EANATLIIPGQAGR IAEPEPEPVPTLQAK KKPAPPTLLPHEENIQNAER	YMR039C	SUB1 SGDID:S000004642,'Transcriptional coactivator, facilitates elongation by influencing enzymes that modify RNAP II, acts in a peroxide resistance pathway involving Rad2p; suppressor of TFIIB mutations', Chr XIII from 349521-348643, reverse complement, Verified ORF
PROTEIN	29	YGL147C	1.0000	200	8	1	FLDGIYVSHK GFITEDL HIDVTFTK KFLDGIYVSHK SLVDNMITGVTK YIQTEQQIEVPEGVTVSIK YVYAHFPINVNIVEK YVYAHFPINVNIVEKDGAK	YGL147C	RPL9A SGDID:S000003115,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Bp and has similarity to E. coli L6 and rat L9 ribosomal proteins', Chr VII from 228334-227759, reverse complement, Verified ORF
PROTEIN	30	YOR197W	1.0000	12	3	1	AALIGSLGSIFK DVGQDGLQAAISYATGNR VMTLQPQQSYLSLLQNMR	YOR197W	MCA1 SGDID:S000005723,'Putative cysteine protease similar to mammalian caspases, involved in regulation of apoptosis upon hydrogen peroxide treatment', Chr XV from 717024-718385, Verified ORF
PROTEIN	31	YLR178C	0.9554	2	2	1	ENNLQLVASNFFYAETK IKDRPNWGYGTPATGVGK	YLR178C	TFS1 SGDID:S000004168,'Carboxypeptidase Y inhibitor, function requires acetylation by the NatB N-terminal acetyltransferase; phosphatidylethanolamine-binding protein involved in protein kinase A signaling pathway', Chr XII from 513823-513164, reverse complement, Verified ORF
PROTEIN	32	YML063W	1.0000	352	12	1	DIFPLQNIHVR EVQNSTLAQLTSK EWFDIK FDVGALMALHGEGSGEEK FDVGALMALHGEGSGEEKGK IFAIAFTR KVSGFKDEVLETV LIPEVINKEIENATK NLLTNFHGMDFTTDK NLLTNFHGMDFTTDKLR VSGFKDEVLETV VVDPFTR	YML063W	RPS1B SGDID:S000004528,'Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Ap and has similarity to rat S3a ribosomal protein', Chr XIII from 146482-147249, Verified ORF
PROTEIN	33	YDR372C	0.9606	2	1	1	TGEVLLDETLQLMK	YDR372C	VPS74 SGDID:S000002780,'Non-essential protein of unknown function involved in vacuolar protein sorting; belongs to a family of cytosolic Golgi-associated proteins suggesting that it may play a role in secretion; also detected in the nucleus', Chr IV from 1222141-1221104, reverse complement, Verified ORF
PROTEIN	34	YOR184W	1.0000	57	10	1	AVQNLVDFIK DGLDDQFLK DLINFNDIGLGIGEISHR EEPQHFGAGPAQMPTPVLQQAAK IAPAGYLVTGSWSQK ILYEALDANSDFYNVPVDPK IPDESLWEDK LHVPAEVIFNAK MNVVFTLK NISGASDETLHELGVPITPIAFDYPTVVK	YOR184W	SER1 SGDID:S000005710,'3-phosphoserine aminotransferase, catalyzes the formation of phosphoserine from 3-phosphohydroxypyruvate, required for serine and glycine biosynthesis; regulated by the general control of amino acid biosynthesis mediated by Gcn4p', Chr XV from 679358-680545, Verified ORF
PROTEIN	35	YMR203W	1.0000	30	4	1	AFSMNPAFQTSHTFSIGSQALPK GNFFSSNPISSFVVDTYK QSLELVNPGTVENLNK TDGSAPGDAGVSYLTR	YMR203W	TOM40 SGDID:S000004816,'Component of the TOM (translocase of outer membrane) complex responsible for recognition and initial import steps for all mitochondrially directed proteins; constitutes the core element of the protein conducting pore', Chr XIII from 668491-669654, Verified ORF
PROTEIN	36	YIR008C	0.9676	2	3	1	ANPDRFEIGAIYNK ANPDRFEIGAIYNKPPR PSRDMINREFAMAFR	YIR008C	PRI1 SGDID:S000001447,'Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair', Chr IX from 374303-373074, reverse complement, Verified ORF
PROTEIN	37	YBL024W	1.0000	13	9	1	APVELPWYPDHLAWQLDVPK DANEEPFVFVDPQHEALK FLVVENAVGNISR HAGEVLNLFK HLPNLTNVEFEGEK IVEANLEMLK KHAGEVLNLFK LNSANLMVVNHDAQFFPR VEDSTEAATEKLSSETPALESEGPQTK	YBL024W	NCL1 SGDID:S000000120,'S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, methylates cytosine to m5C at several positions in tRNAs and intron-containing pre-tRNAs; similar to Nop2p and human proliferation associated nucleolar protein p120', Chr II from 172537-174591, Verified ORF
PROTEIN	38	YOR340C	0.9281	11	1	1	VGGVVLGYEGLK	YOR340C	RPA43 SGDID:S000005867,'RNA polymerase I subunit A43', Chr XV from 960179-959199, reverse complement, Verified ORF
PROTEIN	39	YIL034C	1.0000	12	3	1	DLQDSPFPSAPLR NAAIASSAEEANKDAQAEVIR SPWSNTYYPELSPK	YIL034C	CAP2 SGDID:S000001296,'Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) which binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches', Chr IX from 290088-289225, reverse complement, Verified ORF
PROTEIN	40	YIL043C	1.0000	28	6	1	FGLPHADDVLGLPIGQHIVIK IVYYLDSPDREDWTGGVGYITK MEDQVFVF RNDFQSFPLVEK SHLGMIAGGTGIAPMYQIMK VSLVFGNVHEEDILLK	YIL043C	CBR1 SGDID:S000001305,'Microsomal cytochrome b reductase, not essential for viability; also detected in mitochondria', Chr IX from 274925-274071, reverse complement, Verified ORF
PROTEIN	41	YDL160C	1.0000	11	5	1	GNTFEDFYLKR IEQELGTEIAAIPATIDK IQALIMVPTR MGSINNNFNTNNNSNTDLDR TAAFVIPTLEK	YDL160C	DHH1 SGDID:S000002319,'Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, coordinates distinct steps in mRNA function and decay, interacts with both the decapping and deadenylase complexes, may have a role in mRNA export and translation', Chr IV from 171931-170411, reverse complement, Verified ORF
PROTEIN	42	YGR231C	0.9997	7	3	1	AVVAQFNASQLITQR VILDNEALLLNTVVDAR VLSRPDVVQLPTIYR	YGR231C	PHB2 SGDID:S000003463,'Subunit of the prohibitin complex (Phb1p-Phb2p), a 1.2 MDa ring-shaped inner mitochondrial membrane chaperone that stabilizes newly synthesized proteins; determinant of replicative life span; involved in mitochondrial segregation', Chr VII from 953483-952551, reverse complement, Verified ORF
PROTEIN	43	YGR034W	1.0000	19	3	1	AYFTAPSSER DDEVLVVR VLLSAPLSK	YGR034W	RPL26B SGDID:S000003266,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl26Ap and has similarity to E. coli L24 and rat L26 ribosomal proteins; binds to 5.8S rRNA', Chr VII from 555933-555957,556312-556676, Verified ORF
PROTEIN	44	YML092C	1.0000	27	3	1	LGQIDYALTAVK LTSQEINDRLEAL VSLLTPDIGAVYSGMGPDYR	YML092C	PRE8 SGDID:S000004557,'20S proteasome beta-type subunit', Chr XIII from 86739-85987, reverse complement, Verified ORF
PROTEIN	45	YBR256C	1.0000	4	3	1	DSTLNTMISNIIEEK FGGHYVQGHVDTVANIVSR SNVASWIQGTQVNLER	YBR256C	RIB5 SGDID:S000000460,'Riboflavin synthase; catalyzes the last step of the riboflavin biosynthesis pathway', Chr II from 728097-727381, reverse complement, Verified ORF
PROTEIN	46	YKL122C	1.0000	10	1	1	SIQDIVGLATLIVNTDVEK	YKL122C	SRP21 SGDID:S000001605,'Subunit of the signal recognition particle (SRP), which functions in protein targeting to the endoplasmic reticulum membrane; not found in mammalian SRP; forms a pre-SRP structure in the nucleolus that is translocated to the cytoplasm', Chr XI from 212642-212139, reverse complement, Verified ORF
PROTEIN	47	YPL061W	1.0000	329	21	1	AFHDTEWATQDPR AGTVWINTYNDFDSR ANFQGAITNR EEIFGPVVTVAK EMGEEVYHAYTEVK GYFIRPTVFYDVNEDMR ITLPNGLTYEQPTGLFINNK IVKEEIFGPVVTVAK IYVQEGIYDELLAAFK KVGIPAGVVNIVPGPGR LADELESQIDLVSSIEALDNGK LAFTGSTEVGK PTVFYDVNEDMR QQFDTIMNYIDIGK QQFDTIMNYIDIGKK SAHLVFDDANIKK TLEEGVEMANSSEFGLGSGIETESLSTGLK TLPNLVNGIFK TVGAALTNDPR TYPVEDPSTENTVCEVSSATTEDVEYAIECADR VGIPAGVVNIVPGPGR	YPL061W	ALD6 SGDID:S000005982,'Cytosolic aldehyde dehydrogenase that is activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for the conversion of acetaldehyde to acetate; constitutively expressed', Chr XVI from 432585-434087, Verified ORF
PROTEIN	48	YPR062W	0.9970	11	2	1	GMDIAYEEAALGYK QFIDERPQDWFEDIGE	YPR062W	FCY1 SGDID:S000006266,'Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)', Chr XVI from 677162-677638, Verified ORF
PROTEIN	49	YMR146C	1.0000	63	7	1	EFIILGGGQEAK IITHEGLDAATVAGWSTK NPGSINIYEIER SISDMQFSPDLTYFITSSR VQGHFGPLNTVAISPQGTSYASGGEDGFIR YCVTGSADYSIK YDVSNNYEYVDSIDLHEK	YMR146C	TIF34 SGDID:S000004754,'Subunit of the core complex of translation initiation factor 3(eIF3), which is essential for translation', Chr XIII from 558523-557480, reverse complement, Verified ORF
PROTEIN	50	YGL062W	0.9857	4	12	1	AGITWIGPPAEVIDSVGDK EANYLLGDIVK EGDDVADAFQR LLHYLADVAVNGSSIKGQIGLPKLK NAGTAEFLVDNQNR SFLSPLETDEEIEVVIEQGK SLVPNIPFQMLLR SNPSVPHLHDAQGNVINVTK TAHELSMQTVAIYSHEDR VFDALNDLEQLK VHKGSLIKK VVGDLAQFMVSNK	YGL062W	PYC1 SGDID:S000003030,'Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly similar to isoform Pyc2p but differentially regulated; mutations in the human homolog are associated with lactic acidosis', Chr VII from 385199-388735, Verified ORF
PROTEIN	51	YLR029C	1.0000	77	5	1	QGFVIYR QNTLSLWR RQNTLSLWR VLNSYWVNQDSTYK YLEELQR	YLR029C	RPL15A SGDID:S000004019,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Bp and has similarity to rat L15 ribosomal protein; binds to 5.8 S rRNA', Chr XII from 202591-201977, reverse complement, Verified ORF
PROTEIN	52	YKL142W	1.0000	29	5	1	ELQGELNFIEER EQEDFENFLEGK FSKDELDDAFNDVAR SGSATQFDATDFATNEDLVELVK VEAFHINETTDEEISKELEK	YKL142W	MRP8 SGDID:S000001625,'Putative mitochondrial ribosomal protein, has similarity to E. coli ribosomal protein S2', Chr XI from 178520-179179, Verified ORF
PROTEIN	53	YDR429C	1.0000	62	6	1	AGQVGGAGSIPGQYVPPSR EELLFPFAPIPR GLAFVTFSSEEVAEQALR GYMNLILR IMQVNENADENSLREELLFPFAPIPR TILSELSALEDPATNEGGVEAASEEK	YDR429C	TIF35 SGDID:S000002837,'Subunit of the core complex of translation initiation factor 3(eIF3), which is essential for translation', Chr IV from 1325293-1324469, reverse complement, Verified ORF
PROTEIN	54	YNL104C	1.0000	52	8	1	AIFATINNIIHSGDVSIPSLAEVEGK ATIHTYLATSDMFR EIEVSFPSASQTDFDFTR FAVANYTEHSLGSGSSTQAASYIHLSYR GGAAWVILR IPYLPLDPK NMQIEFSSAVQDHADSLGR WGVGVSEDVGDSSVR	YNL104C	LEU4 SGDID:S000005048,'Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the first step in the leucine biosynthesis pathway', Chr XIV from 426756-424897, reverse complement, Verified ORF
PROTEIN	55	SHUFF_YFR023W	0.8998	4	1	1	GTDTFELQESQPESLARIDNDVFAMLANK	SHUFF_YFR023W	PES4 SGDID:S000001919,'Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p', Chr VI from 199862-201697, Verified ORF
PROTEIN	56	YDR164C	0.9336	3	1	1	VIANPLLLSEQYFPYLK	YDR164C	SEC1 SGDID:S000002571,'Sm-like protein involved in docking and fusion of exocytic vesicles through binding to assembled SNARE complexes at the membrane; localization to sites of secretion (bud neck and bud tip) is dependent on SNARE function', Chr IV from 784212-782038, reverse complement, Verified ORF
PROTEIN	57	YGR210C	0.9998	6	3	1	AVLTSAVTEVFLR LLDVAGLVPGAHSGR SSIVDTLQAQFGGYGSHAPMIQK	YGR210C	YGR210C SGDID:S000003442,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm', Chr VII from 914743-913508, reverse complement, Uncharacterized ORF
PROTEIN	58	YOR168W	1.0000	100	17	1	ALVHNLASFVK DQSIEQNLQEFR ESVMEHNFGDVVK FDDTNPEKEAPEYFESIKR HRDQSIEQNLQEFR ITYSSDYFDELYR KVSDSLYKLIK LFTLEAIR NYVMQYIQENK QDLNSPSPQMWDLIAYR SDFSENVDDKEFFR SENPSSHPEGFLKDINPESEVVYK SFKPIIDQEVLK TMFNEGFLGDLHK TYIQWVPISSK VGENPQAYPELMK VGENPQAYPELMKEHLEVTGGK	YOR168W	GLN4 SGDID:S000005694,'Glutamine tRNA synthetase, monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Glu); N-terminal domain proposed to be involved in enzyme-tRNA interactions', Chr XV from 649304-651733, Verified ORF
PROTEIN	59	YNL002C	0.9999	8	2	1	AQTLNSNPEILLR QFSNAATAPVIEVDIDSLLAK	YNL002C	RLP7 SGDID:S000004947,'Nucleolar protein with similarity to large ribosomal subunit L7 proteins; constituent of 66S pre-ribosomal particles; plays an essential role in processing of precursors to the large ribosomal subunit RNAs', Chr XIV from 627144-626176, reverse complement, Verified ORF
PROTEIN	60	YHR193C	1.0000	120	5	1	AHNGDLVNAIMSLSK DNQIYAIEKPEVFR KDNQIYAIEKPEVFR LAAAQQQAQASGIMPSNEDVATK SAGGNYVVFGEAK	YHR193C	EGD2 SGDID:S000001236,'Alpha subunit of the heteromeric nascent polypeptide-associated complex (NAC) involved in protein sorting and translocation, associated with cytoplasmic ribosomes ', Chr VIII from 488236-487712, reverse complement, Verified ORF
PROTEIN	61	YBR092C	0.9803	4	2	1	NNLTAEYVPFMGNTFHK YSYGQDLVSFYQDGPGYDMIR	YBR092C	PHO3 SGDID:S000000296,'Constitutively expressed acid phosphatase similar to Pho5p; brought to the cell surface by transport vesicles; hydrolyzes thiamin phosphates in the periplasmic space, increasing cellular thiamin uptake; expression is repressed by thiamin', Chr II from 429095-427692, reverse complement, Verified ORF
PROTEIN	62	YHR128W	1.0000	29	4	1	LLVEEGLNHLPVQK NTTRPDFIFYSDR QIVETDTNENFEGVSFMGK YLVPGLGDFGDR	YHR128W	FUR1 SGDID:S000001170,'Uracil phosphoribosyltransferase, synthesizes UMP from uracil; involved in the pyrimidine salvage pathway', Chr VIII from 362118-362768, Verified ORF
PROTEIN	63	YJL122W	0.9999	11	2	1	KNESQNSTAVTLQNASSSPASITTR SVALDLYFQNK	YJL122W	YJL122W SGDID:S000003658,'Hypothetical protein', Chr X from 189637-190164, Uncharacterized ORF
PROTEIN	64	YBL058W	0.9999	10	3	1	EGFQVADGPLYR LGSPIPGESSPAEVPK LGSTIDAADEVVEDNTSQSQR	YBL058W	SHP1 SGDID:S000000154,'UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and interacts with Cdc48p; interacts with ubiquitylated proteins in vivo and is required for degradation of a ubiquitylated model substrate', Chr II from 111439-112710, Verified ORF
PROTEIN	65	YCL017C	1.0000	6	4	1	ELSPLWEMVQEGIDLNSIK FSTEEEVDYVVK PRVRLEPLLSGGGQER SGTLAPPLVAGFGEAAR	YCL017C	NFS1 SGDID:S000000522,'Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis; required for the post-transcriptional thio-modification of mitochondrial and cytoplasmic tRNAs; essential protein located predominantly in mitochondria', Chr III from 94270-92777, reverse complement, Verified ORF
PROTEIN	66	YMR186W	1.0000	768	30	1	AELINNLGTIAK AILFIPK ALKDILGDQVEK APFDLFESK DDQLEYLEEK DFELEETDEEKAER DILGDQVEK DSSMSSYMSSK ELISNASDALDK ELISNASDALDKIR EYEPLTKALKDILGDQVEK GVVDSEDLPLNLSR HFSVEGQLEFR HSEFVAYPIQLLVTK KLIEAFNEIAEDSEQFDK LFLKDDQLEYLEEK LFLKDDQLEYLEEKR LIEAFNEIAEDSEQFDK LLDAPAAIR NIYYITGESLK NPSDITQEEYNAFYK QLETEPDLFIR RAPFDLFESK RAPFDLFESKK SISNDWEDPLYVK SPFLDALK SVDELTSLTDYVTR TGQFGWSANMER TLVDITKDFELEETDEEKAER VFITDEAEDLIPEWLSFVK	YMR186W	HSC82 SGDID:S000004798,'Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels that HSP82 and induced 2-3 fold by heat shock', Chr XIII from 632354-634471, Verified ORF
PROTEIN	67	YLR002C	0.8918	1	2	1	PKDDDEEDEDSNDSSEDDEGPNEEQEAEAK TLIGSVLEGLTK	YLR002C	NOC3 SGDID:S000003992,'Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors to mediate their intranuclear transport; also binds to chromatin to promote the association of DNA replication factors and replication initiation', Chr XII from 156333-154342, reverse complement, Verified ORF
PROTEIN	68	YFL045C	1.0000	94	8	1	DGFKEIHFFGDK EKPETLVLFDVDGTLTPAR ELASQSFINWLGEEK GTFLEFR ILTELFNL LAVFILR TMVGGNDYEIFVDER YLSEIDLPK	YFL045C	SEC53 SGDID:S000001849,'Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose; required for folding and glycosylation of secretory proteins in the ER lumen', Chr VI from 44392-43628, reverse complement, Verified ORF
PROTEIN	69	YLR354C	1.0000	129	10	1	ASGTVVVADTGDFGSIAK FDLNEDAMATEK FQPQDSTTNPSLILAAAK FRFDLNEDAMATEK FSADIVTLFDLIEK ILDWYK LIDVAVEYGK LMNSTEPFPR NLAGVDYLTISPALLDK TTEEQVENAVDR	YLR354C	TAL1 SGDID:S000004346,'Transaldolase, enzyme in the non-oxidative pentose phosphate pathway; converts sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate to erythrose 4-phosphate and fructose 6-phosphate', Chr XII from 837356-836349, reverse complement, Verified ORF
PROTEIN	70	YGL157W	1.0000	24	4	1	HGINTSSGIVSELIHSK IATGEPATGPSFLEK IVLHTASPFHFETTNFEK KFNNNPKLSMEIVEDIAAPNAFDEVFK	YGL157W	YGL157W SGDID:S000003125,'Oxidoreductase, catalyzes NADPH-dependent reduction of the bicyclic diketone bicyclo[2.2.2]octane-2,6-dione (BCO2,6D) to the chiral ketoalcohol (1R,4S,6S)-6-hydroxybicyclo[2.2.2]octane-2-one (BCO2one6ol)', Chr VII from 209011-210054, Verified ORF
PROTEIN	71	YLR249W	1.0000	1005	33	1	AKDILDEFR ALLPHLTNAIVETNK ALLPHLTNAIVETNKWQEK AVDNIPVGPNFDDEEDEGEDLCNCEFSLAYGAK AYEELSNTDLEFK AYEELSNTDLEFKFPEPGYLEGVK DILDEFR DKEIQSVASETLISIVNAVNPVAIK EALASGQFRPLTR EIQSVASETLISIVNAVNPVAIK FPEPGYLEGVK GNFTEFVK IAILAAISAMVDAAK IAILAAISAMVDAAKDQVALR IVVEYIAAIGADLIDER LLPGLKSNFATIADPEAR LVEDPQVIAPFLGK LVLAAGTWQR LVLAAGTWQRPHLIVLDEPTNYLDR MPELIPVLSETMWDTK MPELIPVLSETMWDTKK MTPSGHNWVSGQGAGPR MVAEVDMK NLTEEVWAVK NLTEEVWAVKDGR PHLIVLDEPTNYLDR PHLIVLDEPTNYLDRDSLGALSK RVGNVGEDDAIPEVSHAGDVSTTLQVVNELLKDETVAPR SNFATIADPEAR TPSEYIQWR VGNVGEDDAIPEVSHAGDVSTTLQVVNELLK VGNVGEDDAIPEVSHAGDVSTTLQVVNELLKDETVAPR VLEELFQK	YLR249W	YEF3 SGDID:S000004239,'Translational elongation factor, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes by releasing EF-1 alpha from the ribosomal complex; contains two ABC cassettes; binds and hydrolyses ATP', Chr XII from 636782-639916, Verified ORF
PROTEIN	72	YBR263W	1.0000	98	13	1	ALELYGLDPAK ASALAKCMATVHRR AVMDLLGSELQNK GAMIFFR HSITLIPSENFTSK INFSVFPGHQGGPHNHTIGAMAVALK LMGLDLPDGGHLSHGYQLK LVSGGTDNHLIVIDLSGTQVDGAR SALFPSGLR VETILSALNIAANK WFAQELTK WFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGAR YYGGNEIIDKSESLCQARALELYGLDPAK	YBR263W	SHM1 SGDID:S000000467,'Mitochondrial serine hydroxymethyltransferase, involved in one-carbon metabolism', Chr II from 736259-737731, Verified ORF
PROTEIN	73	YLR109W	1.0000	125	6	1	ETNPGTDVTVSSVESVLAHL EVDQVIVVTVDNPFANQAWAK FASDPGCAFTK MPQTVEWSK SIGFELAVGDGVYWSGR WAMVVENGIVTYAAK	YLR109W	AHP1 SGDID:S000004099,'Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p', Chr XII from 368782-369312, Verified ORF
PROTEIN	74	YOR091W	1.0000	14	3	1	ITLEEFIETER KADHQDDGGIKDYGDGSNPTFDIK LTPITIANFAQWK	YOR091W	YOR091W SGDID:S000005617,'Hypothetical protein', Chr XV from 493434-494471, Uncharacterized ORF
PROTEIN	75	YLR216C	1.0000	28	5	1	INQLKVSIPLNIAICALK INQLKVSIPLNIAICALKLK IVFELYNDIVPK QVLVASSEVLYAEAADEK TFFDISIGGKPQGR	YLR216C	CPR6 SGDID:S000004206,'Peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds to Hsp82p and contributes to chaperone activity', Chr XII from 573213-572098, reverse complement, Verified ORF
PROTEIN	76	YOR369C	1.0000	204	6	1	GEALLVVLVSSVTEANIIK KVVGASVVVVK LVEGLANDPENKVPLIK NWGAETDELSMIMEHFSQQ QLGEWAGLGK VVGASVVVVK	YOR369C	RPS12 SGDID:S000005896,'Protein component of the small (40S) ribosomal subunit; has similarity to rat ribosomal protein S12', Chr XV from 1028623-1028192, reverse complement, Verified ORF
PROTEIN	77	YHL009W-B	0.9134	11	3	2	ENEILCKIIKEGLGESLDIMNTNTTDIFR ENHHPPPIEDIVDMSDQTDMESNCQDGNNLKELK IKTKIVNGVIHVK	YJL113W,YHL009W-B	YHL009W-B SGDID:S000007372,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr VIII from 85905-86990,86992-91314, transposable_element_gene
PROTEIN	78	YNL106C	0.9985	6	2	1	HSTPKPLPPVPALSLSKPVSLQK TNCLDCLDRTNLIQQTISLAVFKLFLEDFR	YNL106C	INP52 SGDID:S000005050,'Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in endocytosis; hyperosmotic stress causes translocation to actin patches', Chr XIV from 424497-420946, reverse complement, Verified ORF
PROTEIN	79	YKL104C	1.0000	40	7	1	AFLSEDGSPTPVEFFVSSDAASVVK EFEAGSQNANLLPIAANEFNLR EIYEQPESTFNTMR GYDSTGIAIDGDEADSTFIYK IEIIQGLKLIPGQIK IKEISYMHSEGVLAGELK SIQTLEMELAQIMK	YKL104C	GFA1 SGDID:S000001587,'Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis', Chr XI from 245017-242864, reverse complement, Verified ORF
PROTEIN	80	YJR094W-A	1.0000	117	3	2	KTVAGGAYTVSTAAAATVR LEIQQHARYDCSFCGK TVAGGAYTVSTAAAATVR	YPR043W,YJR094W-A	RPL43B SGDID:S000003855,'Protein component of the large (60S) ribosomal subunit, identical to Rpl43Ap and has similarity to rat L37a ribosomal protein', Chr X from 608223-608224,608500-608776, Verified ORF
PROTEIN	81	YDR293C	1.0000	7	6	1	IENDNYIQEIHELQK KDCAYQAQEQAIHLLLCK NNEYSPGINSNWR SLFAPYLPQANIPELIQEGR SQEPNNMFVQTTGGGK VLELHWQPGVDSATFIPADEKNPK	YDR293C	SSD1 SGDID:S000002701,'Protein with a role in maintenance of cellular integrity, interacts with components of the TOR pathway; ssd1 mutant of a clinical S. cerevisiae strain displays elevated virulence', Chr IV from 1049388-1045636, reverse complement, Verified ORF
PROTEIN	82	YBR115C	1.0000	23	11	1	IELGEIDTHISQHPLVR IPDIENSVNMVPVDHVAR LDNPTLSVLPHDFLRPQQEPYTK LQVDLPLGTIFK LVETLPSSYPSR SSGGSSQGEVVENVTANYAEDAK SSGGSSQGEVVENVTANYAEDAKK TGDLGRYLPNGDCECCGRADDQVK TGVVVGPDSNPTLSFTSGSEGIPK VGFLPPPTHNDKLPLPSIELTQAQISLVASGAGAR VVVATSLNPPKENELAVAQVTGHPR	YBR115C	LYS2 SGDID:S000000319,'Alpha aminoadipate reductase, catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p', Chr II from 473920-469742, reverse complement, Verified ORF
PROTEIN	83	YER078C	0.9914	5	2	1	IPIEAGQPLHETRPFLIK LYPHYIGHNLGLDVHDVPKVSRYEPLK	YER078C	YER078C SGDID:S000000880,'Metallopeptidase, localized to the mitochondrial matrix', Chr V from 318338-316803, reverse complement, Uncharacterized ORF
PROTEIN	84	YOR261C	1.0000	27	3	1	LIGWYHSGPK SIIAFDDLIENK VTIAPLVLLSALDHYER	YOR261C	RPN8 SGDID:S000005787,'Essential, non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 proteasomal subunit and to another S. cerevisiae regulatory subunit, Rpn11p', Chr XV from 816931-815915, reverse complement, Verified ORF
PROTEIN	85	YER125W	1.0000	11	7	1	ELELLIGGIAEIDIEDWKK GTAQAVESTLQSGTTAATNTATTSHR KKDQGFLGVVNVR LPSSLDQNVPQYK NIFEDAYQEIMR SPDPFAVLTIDGYQTK TTTWDDPRLPSSLDQNVPQYK	YER125W	RSP5 SGDID:S000000927,'Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation; plays a role in heat shock element (HSE)-mediated gene expression and multivesicular body sorting; contains a hect (homologous to E6-AP carboxyl terminus) domain', Chr V from 410185-412614, Verified ORF
PROTEIN	86	YER021W	1.0000	9	5	1	FANQLHDEYLVSMR KYAEEDQVQELLK LNLDSEQTVEYMVSR SLLPYYHLTK YAEEDQVQELLK	YER021W	RPN3 SGDID:S000000823,'Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control', Chr V from 196947-198518, Verified ORF
PROTEIN	87	YKL014C	0.9448	1	1	1	VDSNIPPATSLVIENILPSLLTK	YKL014C	URB1 SGDID:S000001497,'Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs, associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit', Chr XI from 416556-411262, reverse complement, Verified ORF
PROTEIN	88	YCR030C	0.9845	2	1	1	TKPLPVEPASPSISLPTATVDNQPSGQVDSRPLHIR	YCR030C	SYP1 SGDID:S000000626,'Protein with a potential role in actin cytoskeletal organization; overexpression suppresses a pfy1 (profilin) null mutation', Chr III from 176434-173822, reverse complement, Verified ORF
PROTEIN	89	YBL036C	1.0000	17	4	1	EFGENYVQELIEK ILLLVVSKLK LKPASDIQILYDHGVR VPNLYSVETIDSLKK	YBL036C	YBL036C SGDID:S000000132,'Single-domain racemase, possibly non-specific due to the lack of the second domain, which presumably determines specificity', Chr II from 151223-150450, reverse complement, Verified ORF
PROTEIN	90	YGL202W	1.0000	77	9	1	ALQYGFSAGQPELLNFIR DFSYLFSDETNAR EVSNPNIIFFR GVLVVPGSWFK LGDTLYEEFGISK LLYTIPTGQNPTGTSIADHR SANPSNDIPLSR SLANTFLSLDTEGR YNSDPYQLEQSLYHK	YGL202W	ARO8 SGDID:S000003170,'Aromatic aminotransferase, expression is regulated by general control of amino acid biosynthesis', Chr VII from 116063-117565, Verified ORF
PROTEIN	91	YNL069C	1.0000	162	7	1	AEALNISGEFFR IFEGIPPPYDK IFEGIPPPYDKK LSTSVGWK QLASFGY VSSASAAASESDVAK VVVPQALR	YNL069C	RPL16B SGDID:S000005013,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA; has similarity to Rpl16Ap, E. coli L13 and rat L13a ribosomal proteins; transcriptionally regulated by Rap1p', Chr XIV from 495002-494975,494525-493957, reverse complement, Verified ORF
PROTEIN	92	YBR042C	0.9992	9	2	1	IELTEVLILPTLTIIWLVYK TKRLFIVLVSSILHVVAPSAVR	YBR042C	YBR042C SGDID:S000000246,'Hypothetical protein', Chr II from 321609-320416, reverse complement, Uncharacterized ORF
PROTEIN	93	YNL287W	1.0000	34	9	1	AISLTEPEAEFVVR EGPSAPNPSLYVR FTNETQEAVLDLK LSSYISSNTDSFATAFDVNQVR NDPTLYESIISLLK NISTYAITTLLK SLTYVLDESTAFSAER YADELLSIEQIKPFGQLVNSSR YFYDIPSLESK	YNL287W	SEC21 SGDID:S000005231,'Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat; involved in  ER to Golgi transport of selective cargo', Chr XIV from 91994-94801, Verified ORF
PROTEIN	94	YGR103W	1.0000	10	4	1	DIQYLMHEPVLAK EQEKEQNEETELDTFEDNNKNK GSTAPTTFYYAK IISGLSSYILESR	YGR103W	NOP7 SGDID:S000003335,'Nucleolar protein involved in rRNA processing and 60S ribosomal subunit biogenesis; constituent of several different pre-ribosomal particles', Chr VII from 695421-697238, Verified ORF
PROTEIN	95	YLR061W	1.0000	80	3	1	LAFYQVTPEEDEEEDEE TFTVDVSSPTENGVFDPASYAK VEGAVGNLGNAVTVTEDGTVVTVVSTAK	YLR061W	RPL22A SGDID:S000004051,'Protein component of the large (60S) ribosomal subunit, has similarity to Rpl22Bp and to rat L22 ribosomal protein', Chr XII from 263195-263206,263596-263949, Verified ORF
PROTEIN	96	YBR162C	0.9999	5	2	1	LISHIHDGQDGGTQDYFER LISHIHDGQDGGTQDYFERPTDGTLK	YBR162C	TOS1 SGDID:S000000366,'Covalently-bound cell wall protein of unknown function; identified as a cell cycle regulated SBF target gene; deletion mutants are highly resistant to treatment with beta-1,3-glucanase; has sequence similarity to YJL171C', Chr II from 564565-563198, reverse complement, Uncharacterized ORF
PROTEIN	97	YBR094W	0.9913	3	2	1	DRTVLTDAEVIESEMISVTPMK VLITNDDGPLSDQFSPYIRPFIQHIK	YBR094W	YBR094W SGDID:S000000298,'Hypothetical protein', Chr II from 432030-434291, Uncharacterized ORF
PROTEIN	98	YOR374W	1.0000	42	10	1	EMSVDALQNYLQVK GDVDLVINYLK GYFIKPTVFGDVK IAPALVTGNTVVLK IVKEEIFGPVVTVTK LAELIEQDKDVIASIETLDNGK SADEVINMANDSEYGLAAGIHTSNINTALK TAESTPLSALYVSK VGDPFDESTFQGAQTSQMQLNK YIPQAGIPPGVINIVSGFGK	YOR374W	ALD4 SGDID:S000005901,'Mitochondrial aldehyde dehydrogenase, required for growth on ethanol and conversion of acetaldehyde to acetate; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed', Chr XV from 1039838-1041397, Verified ORF
PROTEIN	99	SHUFF_YNL297C	0.9964	3	3	1	FITLDYKAGLLCISNVELETGTTR IHTYVVIKFIFNLPLFKETVK NILQNVTAKFNVTLSLISLLQVGMLNPNILTK	SHUFF_YNL297C	MON2 SGDID:S000005241,'Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p and localizes to the endosome; member of the Sec7p family of proteins', Chr XIV from 76583-71673, reverse complement, Verified ORF
PROTEIN	100	YBR177C	0.9119	1	1	1	NPSFYMFTPENLIK	YBR177C	EHT1 SGDID:S000000381,'Possible serine hydrolase, localized to both lipid particles and mitochondrial outer membrane; may be involved in lipid metabolism; null mutant slightly temperature sensitive at 37C', Chr II from 586157-584802, reverse complement, Verified ORF
PROTEIN	101	YJL034W	1.0000	171	19	1	AKFEELNLDLFK AKFEELNLDLFKK AMSKDNNLLGKFELTGIPPAPR DAGTIAGLNVLR DVDDIVLVGGSTR FELTGIPPAPR HLPFNVVNKDGKPAVEVSVK IEIDSFVDGIDLSETLTR ITPSYVAFTDDER IVNEPTAAAIAYGLDK KKHGIDVSDNNK KVFTPEEISGMILGK MVEEAEKFASEDASIK NQVAANPQNTIFDIK SQIFSTAVDNQPTVMIK VFTPEEISGMILGK VQQLLESYFDGK VQQLLESYFDGKK VTHAVVTVPAYFNDAQR	YJL034W	KAR2 SGDID:S000003571,'ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p', Chr X from 381244-383292, Verified ORF
PROTEIN	102	YHR107C	1.0000	11	3	1	ADTLTAQELQQFK QLIEAMPFAIVGSEK TTFINTLFQTVLK	YHR107C	CDC12 SGDID:S000001149,'Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM', Chr VIII from 328039-326816, reverse complement, Verified ORF
PROTEIN	103	YDR346C	1.0000	42	4	1	GGISAVTGMAEPEYGKDYIHSVADR IDVMGEIPSFVK IGDDPATYYGNNINEPWGSMR NIVSGVAGTKPFIYQYADPK	YDR346C	SVF1 SGDID:S000002754,'Protein with a potential role in cell survival pathways, required for the diauxic growth shift; expression in mammalian cells increases survival under conditions inducing apoptosis', Chr IV from 1168653-1167208, reverse complement, Verified ORF
PROTEIN	104	YDR091C	1.0000	45	8	1	AIIKPQYVDNIPR CPFDAIQIINLPTNLEAHVTHRYSANSFKLHR EGINIFLDGHIPAENLR FDDPPEWQEIIK GQFLNPQFQTDVVKPLR IDDIIDQEVQHLSGGELQR LLAGALKPDEGQDIPK SSGNYFFLDNTGI	YDR091C	RLI1 SGDID:S000002498,'Essential iron-sulfur protein required for ribosome biogenesis and translation initiation; facilitates binding of a multifactor complex (MFC) of translation initiation factors to the small ribosomal subunit; predicted ABC family ATPase', Chr IV from 628531-626705, reverse complement, Verified ORF
PROTEIN	105	YKR092C	0.9845	2	1	1	INFEAWELTDNTYK	YKR092C	SRP40 SGDID:S000001800,'Nucleolar, serine-rich protein with a role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140', Chr XI from 613527-612307, reverse complement, Verified ORF
PROTEIN	106	YLR089C	1.0000	11	6	1	EHPGKFDNVQLASLHSTSK IINANIGNPQQLQQKPLTYYR LITRAMTLYETFNSLEGIECQK QVLSLLQYPELLNQNEQQLVDSK SLMEDIGGSVGAYSSSQGVEGIRK SVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLSIFCR	YLR089C	YLR089C SGDID:S000004079,'Putative alanine transaminase (glutamic pyruvic transaminase)', Chr XII from 320016-318238, reverse complement, Uncharacterized ORF
PROTEIN	107	YOL061W	1.0000	18	4	1	ATAIADALELSFALIHK ENYTFESHPGTPVSSSLMTQRPGAESSLK IPDYQDAVIVSPDAGGAK VYALITHGVFSGDALER	YOL061W	PRS5 SGDID:S000005422,'5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, involved in nucleotide, histidine, and tryptophan biosynthesis; one of a five related enzymes, which are active as heteromultimeric complexes', Chr XV from 212244-213734, Verified ORF
PROTEIN	108	YDL014W	1.0000	174	10	1	DHCIVVGRYMRSGLK GGAR IIALNSHMFLK IKPLEQLTLEPYER ISVEEPSKEDGVPPTKVEYR KRPNIIPIIEDAR LAAGIMGGLDELFIAPGK LAAGIMGGLDELFIAPGKK RPNIIPIIEDAR VWNPFR	YDL014W	NOP1 SGDID:S000002172,'Nucleolar protein, component of the small subunit processome complex, which is required for processing of pre-18S rRNA; has similarity to mammalian fibrillarin', Chr IV from 427361-428344, Verified ORF
PROTEIN	109	YCL064C	0.9926	6	2	1	DTPVIEVADNFIFPEK NTGAQVIVSGAYWK	YCL064C	CHA1 SGDID:S000000569,'Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of both L-serine and L-threonine; required to use serine or threonine as the sole nitrogen source, transcriptionally induced by serine and threonine', Chr III from 16880-15798, reverse complement, Verified ORF
PROTEIN	110	YGL022W	0.9808	8	2	1	DFYTAEGEYR LALIDDFR	YGL022W	STT3 SGDID:S000002990,'Subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-linked glycosylation of newly synthesized proteins; forms a subcomplex with Ost3p and Ost4p and is directly involved in catalysis', Chr VII from 452409-454565, Verified ORF
PROTEIN	111	YLR192C	1.0000	44	6	1	ALLDIDTLDEK DTPIETHPLFNAETK DTPIETHPLFNAETKR KAEMESDLNNAADLFAGLGVAEEHPR KSPLNYSSSLAIDLIR SPLNYSSSLAIDLIR	YLR192C	HCR1 SGDID:S000004182,'Dual function protein involved in translation initiation as a substoichiometric component of eukaryotic translation initiation factor 3 (eIF3) and required for processing of 20S pre-rRNA; binds to eIF3 subunits Rpg1p and Prt1p and 18S rRNA', Chr XII from 539591-538794, reverse complement, Verified ORF
PROTEIN	112	YOR265W	1.0000	14	3	1	IREFKEDLEQFLK LTKEEGYYQQELKDQEAHVAK SAITSAQELLDSK	YOR265W	RBL2 SGDID:S000005791,'Protein involved in microtubule morphogenesis, required for protection from excess free beta-tubulin; proposed to be involved the folding of beta-tubulin', Chr XV from 820453-820773, Verified ORF
PROTEIN	113	YDL190C	0.9994	2	3	1	LASMLNYNLESLVGPK LPLIPDQIGVENVDNADFLR PIAEIFTKIDGFFADYSCK	YDL190C	UFD2 SGDID:S000002349,'Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1), a ubiquitin-conjugating enzyme (E2), and a ubiquitin protein ligase (E3) to conjugate ubiquitin to substrates; also functions as an E3', Chr IV from 121593-118708, reverse complement, Verified ORF
PROTEIN	114	YOR142W	1.0000	29	4	1	DVGVAVVESPGYLGQALLDQFAK QGTFHASISQEYGTNVVGGTNPK SKPMPVASFIAGTVAGQMK VIFQGFTGK	YOR142W	LSC1 SGDID:S000005668,'Alpha subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate', Chr XV from 593058-594047, Verified ORF
PROTEIN	115	YDR304C	1.0000	27	6	1	EVIIVESGELETVPLDNKDAAK LQEEIKAEASEAAHDEL MGYLNSIFHR NMPVKEVIIVESGELETVPLDNK SIFGNTFKDENFDVK VIPNFMIQGGDFTHR	YDR304C	CPR5 SGDID:S000002712,'Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum, catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER', Chr IV from 1072553-1071876, reverse complement, Verified ORF
PROTEIN	116	YPL154C	1.0000	50	7	1	ALLPLALLLVSANQVAAKVHKAK FDGILGLGYDTISVDK FKGDITWLPVR KYYSIYDLGNNAVGLAK QDFAEATSEPGLTFAFGK VVPPFYNAIQQDLLDEK YYSIYDLGNNAVGLAK	YPL154C	PEP4 SGDID:S000006075,'Vacuolar aspartyl protease (proteinase A), required for the posttranslational precursor maturation of vacuolar proteinases; synthesized as a zymogen, self-activates', Chr XVI from 260930-259713, reverse complement, Verified ORF
PROTEIN	117	YDR033W	1.0000	42	2	1	INPPTGADFHITSR LGYHFGPSDAEAVMAPK	YDR033W	MRH1 SGDID:S000002440,'Protein that localizes primarily to the plasma membrane, also found at the nuclear envelope; has similarity to Hsp30p and Yro2p, which are induced during heat shock', Chr IV from 508144-509106, Verified ORF
PROTEIN	118	YNL014W	0.9685	29	5	1	AVDNIPVGPNFQDEEDEGEDLCNCEFSLAYGAK PHLIVLDEPTNYLDR PHLIVLDEPTNYLDRDSLGALSK TPSEYIQWR WVPMMSVDNAWLPR	YNL014W	HEF3 SGDID:S000004959,'Translational elongation factor EF-3; paralog of YEF3 and member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells', Chr XIV from 606320-609454, Verified ORF
PROTEIN	119	YNL241C	1.0000	73	13	1	AVAPIDTDDVLLGQYGK FGNQFLNASWNR HIERPDGPTPEIYPYGSR HPYAWPVTKPEDTKDN KPHGEADDSKVEQFFK MVSYISGNYDTDEGFDELR NLGPLFKEEELYR NTVISVFGASGDLAK PFGHDLASAR TFPALFGLFR TPGLSNATQVTDLNLTYASR VIVEKPFGHDLASAR VKVLKAVAPIDTDDVLLGQYGK	YNL241C	ZWF1 SGDID:S000005185,'Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway; involved in adapting to oxidatve stress; homolog of the human G6PD which is deficient in patients with hemolytic anemia', Chr XIV from 197944-196427, reverse complement, Verified ORF
PROTEIN	120	YDL140C	1.0000	18	12	1	EVFVDGEANWPLPVNIR IRFPETMDETQTR KIENTMLENITLR PLWSGKQILSVAIPNGIHLQRFDEGTTLLSPK QMVMAGSKGSFINIAQMSACVGQQSVEGKR QSLDTIGGSDAAFEK SLDAETEAEEDHMLK TLPHFSKDDYSPESK TLTYPEVVTPYNIDR TPSLTVYLEPGHAADQEQAK VLSTEEILNIFK YRVDLLNTDHTLDPSLLESGSEILGDLK	YDL140C	RPO21 SGDID:S000002299,'RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime', Chr IV from 210562-205361, reverse complement, Verified ORF
PROTEIN	121	SHUFF_YML093W	0.9948	3	4	1	DQNTLSSGPEQKQDLVDDSNATDEEMYEPNSKDDK ENFDFEFDSLLR ENMEMILENSKKWNSMEAR EQDDLEDESGPNEDK	SHUFF_YML093W	UTP14 SGDID:S000004558,'Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr XIII from 83090-85789, Verified ORF
PROTEIN	122	YGR123C	0.9977	7	3	1	AKPNDPAATK GLGHAFGPDITDR KYVAAIISHADTLFR	YGR123C	PPT1 SGDID:S000003355,'Protein serine/threonine phosphatase with similarity to human phosphatase PP5; present in both the nucleus and cytoplasm; expressed during logarithmic growth', Chr VII from 738208-736667, reverse complement, Verified ORF
PROTEIN	123	YBR269C	0.9845	2	1	1	IATSQEAIDQYNAQATGDR	YBR269C	YBR269C SGDID:S000000473,'The authentic, non-tagged protein was localized to the mitochondria', Chr II from 742571-742155, reverse complement, Uncharacterized ORF
PROTEIN	124	YHR089C	0.9998	27	2	1	IPYFNAPIYLENK VDEILGPLNEVFFTIK	YHR089C	GAR1 SGDID:S000001131,'Protein component of the H/ACA snoRNP pseudouridylase complex, involved in the modification and cleavage of the 18S pre-rRNA', Chr VIII from 283300-282683, reverse complement, Verified ORF
PROTEIN	125	YAL044C	1.0000	47	3	1	LGEGVNVEQVEGLMSLEQYEK LPFLYSSQGPQAVR NKLPFLYSSQGPQAVR	YAL044C	GCV3 SGDID:S000000042,'H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of levels of 5,10-methylene-THF in the cytoplasm', Chr I from 58463-57951, reverse complement, Verified ORF
PROTEIN	126	YNL268W	1.0000	5	1	1	LQVVSHETDINEDEEEAHYEDK	YNL268W	LYP1 SGDID:S000005212,'Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids', Chr XIV from 138551-140386, Verified ORF
PROTEIN	127	YDL029W	1.0000	27	5	1	AGENFPDYTFPSIVGRPILR AIVLSGGSSMYPGLPSR ETTALVESYELPDGR ETTALVESYELPDGRTIKVGQER ILLTEPPMNPLK	YDL029W	ARP2 SGDID:S000002187,'Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity', Chr IV from 399337-399358,399482-400635, Verified ORF
PROTEIN	128	YHL019C	0.9706	2	2	1	SSQYNSDEDDPNTCASMVAEFPLFNQEEYDR VTVDNEEWSPGEESSSSSGSDSDSEYSNTNK	YHL019C	APM2 SGDID:S000001011,'Protein of unknown function, homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport', Chr VIII from 69545-67728, reverse complement, Verified ORF
PROTEIN	129	YER114C	0.9991	3	1	1	RAPKPPSYPSPAQPPK	YER114C	BOI2 SGDID:S000000916,'Protein implicated in polar growth, functionally redundant with Boi1p; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain', Chr V from 393708-390586, reverse complement, Verified ORF
PROTEIN	130	YDR518W	0.9620	3	1	1	VVILPYFTDIEPDLFPK	YDR518W	EUG1 SGDID:S000002926,'Protein disulfide isomerase of the endoplasmic reticulum lumen, function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER', Chr IV from 1478600-1480153, Verified ORF
PROTEIN	131	YLR328W	1.0000	6	2	1	VLDHFNHEINIK YQIADLEEVPHGIVR	YLR328W	NMA1 SGDID:S000004320,'Nicotinic acid mononucleotide adenylyltransferase, involved in NAD(+) salvage pathway', Chr XII from 784913-786118, Verified ORF
PROTEIN	132	YBL003C	1.0000	99	4	2	AGLTFPVGR HLQLAIR LLGNVTIAQGGVLPNIHQNLLPK NDDELNKLLGNVTIAQGGVLPNIHQNLLPK	YBL003C,YDR225W	HTA2 SGDID:S000000099,'One of two nearly identical (see also HTA1) histone H2A subtypes; core histone required for chromatin assembly and chromosome function; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p ', Chr II from 235795-235397, reverse complement, Verified ORF
PROTEIN	133	YJR077C	1.0000	26	9	1	APGQSTVGLLAQLAK ASEFYYGFAGPK EEGIGSFYSGFTPILFK FFIDNLGYDTASR ILKEEGIGSFYSGFTPILFK ILKEEGIGSFYSGFTPILFKQIPYNIAK KAPGQSTVGLLAQLAK MSVSAAPAIPQYSVSDYMK QLGFFGSFAGLPTR	YJR077C	MIR1 SGDID:S000003838,'Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria; functionally redundant with Pic2p but more abundant than Pic2 under normal conditions', Chr X from 578105-577170, reverse complement, Verified ORF
PROTEIN	134	YNR013C	0.9998	3	2	1	ATQLFNQQQQHQLQSVAR FHSHVFNPATINR	YNR013C	PHO91 SGDID:S000005296,'Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth', Chr XIV from 651714-649030, reverse complement, Verified ORF
PROTEIN	135	YFL005W	1.0000	8	3	1	ELGIPFIESSAK NDDNVNEIFFTLAK TVNEHANDEAQLLLVGNK	YFL005W	SEC4 SGDID:S000001889,'Secretory vesicle-associated Rab GTPase essential for exocytosis; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane', Chr VI from 130329-130976, Verified ORF
PROTEIN	136	YLR449W	1.0000	16	6	1	GEYYNQDNNDGLEEDESESEQEADVPKRSVK GWDIGVAGMAVGGER ITMAAIDPEPFDDDKKPSTLR LLEGGIIIEDR QALPGIPANSELTFDVK RIVIPAPYAYGK	YLR449W	FPR4 SGDID:S000004441,'Nuclear protein, putative peptidyl-prolyl cis-trans isomerase (PPIase) with similarity to Fpr3p; overproduction suppresses the growth defect resulting from the absence of E3 ubiquitin-protein ligase Tom1p', Chr XII from 1030830-1032008, Verified ORF
PROTEIN	137	YDL007W	1.0000	18	5	1	ESVELPLTHPELYEEMGIKPPK SPTESYSDIGGLESQIQEIK TMLELLNQLDGFDDRGDVK TMSIVGVLQDDADPMVSVMK VAGENAPSIVFIDEIDAIGTK	YDL007W	RPT2 SGDID:S000002165,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle', Chr IV from 438044-439357, Verified ORF
PROTEIN	138	YPL218W	1.0000	61	5	1	FTTFDLGGHIQAR IDAPNAVSEAELR LATLQPTWHPTSEELAIGNIK LLFLGLDNAGK VELDALFNIAELK	YPL218W	SAR1 SGDID:S000006139,'GTPase, GTP-binding protein of the ARF family, component of COPII coat of vesicles; required for transport vesicle formation during ER to Golgi protein transport', Chr XVI from 138697-138724,138864-139408, Verified ORF
PROTEIN	139	YMR314W	1.0000	19	5	1	AGVEAISQSLRDESLTVDNLSIAIVGK DTPFTIYDGEAVAK LFQVEYALEAIK NNYDGDTVTFSPTGR SGAHLLEFQPSGNVTELYGTAIGAR	YMR314W	PRE5 SGDID:S000004931,'20S proteasome alpha-type subunit', Chr XIII from 901708-902412, Verified ORF
PROTEIN	140	YHR190W	0.9986	9	3	1	LAVQDPNFLK LLQLALHPVEMK LPPNVKPNETPIFLK	YHR190W	ERG9 SGDID:S000001233,'Farnesyl-diphosphate farnesyl transferase (squalene synthase), joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway', Chr VIII from 484845-486179, Verified ORF
PROTEIN	141	YBR112C	0.9880	7	3	1	AAELYERALLVNPELSDVWATLGHCYLMLDDLQR AASVSPSTKPLNTEPESSSVQPTVSSESSTTK YMEGAIHTLVDAAVSSSTHTENNTK	YBR112C	CYC8 SGDID:S000000316,'General transcriptional co-repressor, acts together with Tup1p; also acts as part of a transcriptional co-activator complex that recruits the SWI/SNF and SAGA complexes to promoters', Chr II from 465764-462864, reverse complement, Verified ORF
PROTEIN	142	YNL247W	1.0000	29	6	1	AGEPEWESPWGK ELLADFVESESK FLTNDEKLEIVK FNDDMLSLNVLPPTVTTR VKDVTVPLLDKELGSTISNPEIFR VSEYVPEIIDFVQK	YNL247W	YNL247W SGDID:S000005191,'Protein required for cell viability', Chr XIV from 182876-185179, Uncharacterized ORF
PROTEIN	143	YDL135C	1.0000	8	4	1	AGIAVDKIDDHLGSYAPNTK ESLGLSSDVLPLEFPGDK KAGIAVDKIDDHLGSYAPNTK TKPFYEVELPESEAPSGFLAR	YDL135C	RDI1 SGDID:S000002294,'Rho GDP dissociation inhibitor involved in the localization and regulation of Cdc42p', Chr IV from 219288-218680, reverse complement, Verified ORF
PROTEIN	144	YGR214W	1.0000	203	7	2	FTPGSFTNYITR IIAAIPNPEDVVAISSR LVIVTDPR MSLPATFDLTPEDAQLLLAANTHLGAR NVQVHQEPYVFNAR NVQVHQEPYVFNARPDGVHVINVGK TQPWSIMPDLYFYR	YLR048W,YGR214W	RPS0A SGDID:S000003446,'Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp; required for maturation of 18S rRNA along with Rps0Bp; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal', Chr VII from 920580-920669,921125-921793, Verified ORF
PROTEIN	145	YCR002C	0.9606	3	1	1	LNINVIDTPGFGDFIDNSK	YCR002C	CDC10 SGDID:S000000595,'Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM', Chr III from 118346-117378, reverse complement, Verified ORF
PROTEIN	146	YAL016W	1.0000	16	5	1	DSDSNESLYPLALLMDELK FLNDPSIILNK ILPAVQNLSMDESETVR KLDTIALALGPER MSGARSTTAGAVPSAATTSTTSTTSNSK	YAL016W	TPD3 SGDID:S000000014,'Regulatory subunit A of the heterotrimeric protein phosphatase 2A, which also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and for transcription by RNA polymerase III', Chr I from 124880-126787, Verified ORF
PROTEIN	147	SHUFF_YOR336W	0.8963	3	3	1	IFLDPIFKNGENAAGKGLDLR LLDFVSYLGLGSKSFVDSDQHLSILFRADTVENIVR VTTTLISLGPTGAR	SHUFF_YOR336W	KRE5 SGDID:S000005863,'Protein required for beta-1,6 glucan biosynthesis; mutations result in aberrant morphology and severe growth defects', Chr XV from 949770-953867, Verified ORF
PROTEIN	148	YBR069C	0.9132	1	1	1	EYENSESSENPNSSR	YBR069C	TAT1 SGDID:S000000273,'Amino acid transport protein for valine, leucine, isoleucine, and tyrosine, low-affinity tryptophan and histidine transporter; overexpression confers FK506 resistance', Chr II from 378430-376571, reverse complement, Verified ORF
PROTEIN	149	YML073C	1.0000	134	9	1	ASLVPGTVLILLAGR EANLFPEQQNK FNVEYFAK HLEDNTLLISGPFK LRASLVPGTVLILLAGRFR QYLSASFSLK VSVEGVNVEK WYPSEDVAALK WYPSEDVAALKK	YML073C	RPL6A SGDID:S000004538,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA', Chr XIII from 124172-124158,123742-123227, reverse complement, Verified ORF
PROTEIN	150	YPL143W	1.0000	80	5	1	IEGVATPQDAQFYLGK IEGVATPQDAQFYLGKR IFLYPSNI VNNPNVSLIK VNNPNVSLIKIEGVATPQDAQFYLGK	YPL143W	RPL33A SGDID:S000006064,'N-terminally acetylated ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Bp and has similarity to rat L35a; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable', Chr XVI from 282121-282139,282665-282969, Verified ORF
PROTEIN	151	YJL167W	1.0000	70	5	1	ADVLTAFLNK FLNVFPK GLSVVDTYAILSNK IEQLYHEYEESIAK LVEELNASLLAYGMPK	YJL167W	ERG20 SGDID:S000003703,'Farnesyl pyrophosphate synthetase, has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis', Chr X from 105008-106066, Verified ORF
PROTEIN	152	YOR198C	1.0000	52	6	1	INEIEESIASGDLSLVQEK KNILPDLSSNALETKPAR KVVADDLVLVTPK LIKDLVNIEPIRK NTENEQPASIFNK VVADDLVLVTPK	YOR198C	BFR1 SGDID:S000005724,'Component of mRNP complexes associated with polyribosomes; implicated in secretion and nuclear segregation; multicopy suppressor of BFA (Brefeldin A) sensitivity', Chr XV from 720066-718654, reverse complement, Verified ORF
PROTEIN	153	YHR143W-A	0.9845	13	1	1	EGFQIPTNLDAAAAGTSQAR	YHR143W-A	RPC10 SGDID:S000001185,'RNA polymerase subunit, found in RNA polymerase complexes I, II, and III', Chr VIII from 387236-387448, Verified ORF
PROTEIN	154	YLL050C	1.0000	87	5	1	ALNGVSTDVQGTDFSEVSYDSVLER ETSTDPSYDAFLEK FILFGLNDAK IVFFTWSPDTAPVR SGVAVADESLTAFNDLK	YLL050C	COF1 SGDID:S000003973,'Cofilin, promotes actin filament depolarization in a pH-dependent manner; binds both actin monomers and filaments and severs filaments , thought to be regulated by phosphorylation at SER4, ubiquitous and essential in eukaryotes', Chr XII from 40413-40400,40220-39803, reverse complement, Verified ORF
PROTEIN	155	YDR023W	1.0000	184	16	1	GYIPLQAPVMMNK IEQFVITEPEKSWEEFEK IVGIVSGELNNAAAK KELTEKEQQEDK KVFQVGNIVHPSVVVSNDEENNELVR KYIPGEPEFLPFVNELPK MISYSEEFYK MLDINQFIEDK MLDINQFIEDKGGNPELIR PASLSHHEILLR TAQLSEFDEELYK TAQLSEFDEELYKVIDGEDEK TRFELDELNKK TWKPEDLEAVGPIASVTGK VFQVGNIVHPSVVVSNDEENNELVR YIPGEPEFLPFVNELPK	YDR023W	SES1 SGDID:S000002430,'Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p', Chr IV from 489505-490893, Verified ORF
PROTEIN	156	YHR197W	0.9679	4	1	1	VSILPIAISLLK	YHR197W	RIX1 SGDID:S000001240,'Essential protein involved in the processing of the ITS2 region of the rRNA locus; required for the maturation and nuclear export of the 60S ribosomal subunit', Chr VIII from 493896-496187, Verified ORF
PROTEIN	157	YPL273W	1.0000	11	4	1	DGTTMEEIAQVIK IWLPNSDKLNSWDTVVK TLSEYNNLLNR VLVLDGGQGTELENR	YPL273W	SAM4 SGDID:S000006194,'S-adenosylmethionine-homocysteine methyltransferase, functions along with Mht1p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio', Chr XVI from 25087-26064, Verified ORF
PROTEIN	158	YPR041W	1.0000	33	7	1	AAASTLEDIEVKDDEWAVDMSEEAIR DLIPLLPK GGGLSISDIAQGK ILVQLYNNDIISEEEIMR ILVTPEYEK LQDVLDGFINK TAVLNVADISHALNRPAPYIVK	YPR041W	TIF5 SGDID:S000006245,'Translation initiation factor eIF-5; N-terminal domain functions as a GTPase-activating protein to mediate hydrolysis of ribosome-bound GTP; C-terminal domain is the core of ribosomal preinitiation complex formation', Chr XVI from 648701-649918, Verified ORF
PROTEIN	159	YJL050W	1.0000	12	8	1	AMASISNQIGDDPNSTDSR GSEVMREVAWVIFDEVHYMRDK HILPLLR HQVALPPNYDYTPIAEHK IFNNAIALLPETDRELPQIK TYPFTLDPFQDTAISCIDRGESVLVSAHTSAGK VVVPVLADSFEQEASR WVSGGEYIQMSGR	YJL050W	MTR4 SGDID:S000003586,'Dead-box family ATP dependent helicase required for mRNA export from the nucleus; co-factor of the exosome complex, required for 3' end formation of 5.8S rRNA', Chr X from 342439-345660, Verified ORF
PROTEIN	160	YOR136W	1.0000	40	5	1	ISIFEAVHGSAPDIAGQDK LADGLFVNVAK TFGLFANVRPAK TGDLAGTATTSSFTEAVIK YTVSFIEGDGIGPEISK	YOR136W	IDH2 SGDID:S000005662,'Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle', Chr XV from 580251-581360, Verified ORF
PROTEIN	161	YDR221W	0.9294	1	1	1	SEVADGICDCCDCSDELLSGYELFDAGSNCSQLK	YDR221W	GTB1 SGDID:S000002629,'Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p, involved in removal of two glucose residues from N-linked glycans during glycoprotein biogenesis in the ER', Chr IV from 907326-909434, Verified ORF
PROTEIN	162	YGR264C	1.0000	75	10	1	DINEILSNYVK DLVWGTPVPLEK FHLAILEGHNINK GVGVFGNNAQDSGISPSVWR IALALEYASK LDDASPEPK LDNTLFSQSPEK NLKPEVDNDNAAMELR NNSELLANLGNFVNR TTTDKQTEIAQHIFTK	YGR264C	MES1 SGDID:S000003496,'Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p, which increases the catalytic efficiency of both tRNA synthetases; also has a role in nuclear export of tRNAs', Chr VII from 1021859-1019604, reverse complement, Verified ORF
PROTEIN	163	YDL153C	0.9998	2	2	1	HLEELNMNDYLDEEEEEEWVKSAKEFDMGEFK SINTQGENDYYQQVQR	YDL153C	SAS10 SGDID:S000002312,'Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing; essential nucleolar protein that, when overproduced, disrupts silencing', Chr IV from 183019-181187, reverse complement, Verified ORF
PROTEIN	164	YDL150W	0.9382	6	3	1	EDMETQASDPSK RIEQLFPVRPVR YLNNTHVISSGPLAAGNFVSEKGDLRR	YDL150W	RPC53 SGDID:S000002309,'RNA polymerase III subunit C53', Chr IV from 183344-184612, Verified ORF
PROTEIN	165	YLL001W	0.9999	4	2	1	LDLMDSGTNALDILSGK VFSPHVLNLTLVDLPGITK	YLL001W	DNM1 SGDID:S000003924,'Dynamin-related GTPase required for mitochondrial fission and the maintenance of mitochondrial morphology, assembles on the cytoplasmic face of mitochondrial tubules at sites at which division will occur; also participates in endocytosis', Chr XII from 147889-150162, Verified ORF
PROTEIN	166	YER036C	1.0000	88	15	1	FIASAGTYANLVK GQLGRYGLTGEGQTVQMATLSEGQR ILDKMEADGLVQPVVPDK ILDKMEADGLVQPVVPDKVFSFR IMTGELTPQSGR LGVYSQHSQDQLDLTK LSSVSLLFHGK MDSLDPDTFESR MEADGLVQPVVPDK MEADGLVQPVVPDKVFSFR TILEDGPESELLEPLYER VLIQDSGLELNYGR VVTGVLSSLETSR WDGSILQYK YGLTGEGQTVQMATLSEGQR	YER036C	ARB1 SGDID:S000000838,'ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis, has similarity to Gcn20p; shuttles from nucleus to cytoplasm, physically interacts with Tif6p, Lsg1p', Chr V from 225198-223366, reverse complement, Uncharacterized ORF
PROTEIN	167	YNL168C	0.9956	4	2	1	GFDTFMPISAIVSR QPFFFLKPTSSIVTPLSSSLVK	YNL168C	YNL168C SGDID:S000005112,'The authentic, non-tagged protein was localized to mitochondria', Chr XIV from 318811-318032, reverse complement, Uncharacterized ORF
PROTEIN	168	YHR132C	0.9159	2	2	1	DLENLLELSYGLSK TIVITGGIHAR	YHR132C	ECM14 SGDID:S000001174,'Putative metalloprotease with similarity to the zinc carboxypeptidase family, required for normal cell wall assembly', Chr VIII from 369797-368505, reverse complement, Verified ORF
PROTEIN	169	YDR101C	1.0000	14	5	1	ATNPNGNLSYDATSTLTLPGHELPLPK GVVWTESHQEADLLSNTDAK LSHLSSNFPFVHENEEELQSLK LSHLSSNFPFVHENEEELQSLKK WVPWDHILK	YDR101C	ARX1 SGDID:S000002508,'Protein associated with the ribosomal export complex', Chr IV from 657464-655683, reverse complement, Verified ORF
PROTEIN	170	YOR335C	1.0000	239	27	1	AITEAINYMK AITEAINYMKSNDSVKDK AVFGETYPDPVR DAVDDLESLFK ENLQVFYKEIPLDLAK IIASFDELR IQEITSVRPYSGNFGENDKDGIDTAYR IVAVTGTEAFEAQR LAEQFAADLDAADKLPFSPIK LAEQFAADLDAADKLPFSPIKEK LGQLSISVITK LHDGTNFVDEITEPGKK LHDGTNFVDEITEPGKKYGIILDK LNVHELSELNDAKVPK LVSVLQDVR LYVTYFEGDEK NNHTGTHILNFALK NTFLDYFK NVGVPDDHILPGNAKDNFWEMGDQGPCGPCSEIHYDRIGGR RIVAVTGTEAFEAQR SIYLLAGNDPEGR SNYDTDVFTPLFER TFFETNENAPYLVK TLTFALADGGVPNNEGR VAHGCYISNAALAKGIDGSALAK VVSVGKPIEELLANPANEEWTK YGSANVEGTILK	YOR335C	ALA1 SGDID:S000005862,'Cytoplasmic alanyl-tRNA synthetase, required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog', Chr XV from 949106-946230, reverse complement, Verified ORF
PROTEIN	171	YNL087W	0.9999	9	3	1	AGSTVFALGTNVVSTGLGTIDK AVVPLSTIDPESDTTFNIPLVGPK SVGYTTPIGMLR	YNL087W	TCB2 SGDID:S000005031,'Bud-specific protein with a potential role in membrane trafficking; GFP-fusion protein migrates from the cell surface to intracellular vesicles near vacuole; contains 3 calcium and lipid binding domains; mRNA is targeted to the bud via the mRNA transport system involving She2p', Chr XIV from 462413-465949, Verified ORF
PROTEIN	172	YJL177W	0.9890	2	7	1	ETAQAINGWELTK FVQGLLQNAAANAEAK INKYESSPSHIELVVTEK INKYESSPSHIELVVTEKEEAVAK LYVSHIQVNQAPK YESSPSHIELVVTEKEEAVAK YLDQVLDHQR	YJL177W	RPL17B SGDID:S000003713,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins', Chr X from 90784-91092,91410-91655, Verified ORF
PROTEIN	173	YGL037C	1.0000	10	3	1	GEELINPISDLMQDADR GEELINPISDLMQDADRDWHR TTVLLDYTRPISDDPEVINK	YGL037C	PNC1 SGDID:S000003005,'Nicotinamidase that converts nicotinamide to nicotinic acid as part of the NAD(+) salvage pathway, required for life span extension by calorie restriction; PNC1 expression responds to all known stimuli that extend replicative life span', Chr VII from 427953-427303, reverse complement, Verified ORF
PROTEIN	174	YDR502C	1.0000	9	9	1	FVIGGPQGDAGLTGR IIVDAYGGASSVGGGAFSGK KIIVDAYGGASSVGGGAFSGK NFDLRPGVLVK PIYLPTASYGHFTNQEYSWEKPK RIDTVVISAQHADEISTADLR SDDEIIEIIKK SLEDLGAGDQGIMFGYATDETPEGLPLTILLAHK YFIQPSGR	YDR502C	SAM2 SGDID:S000002910,'S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)', Chr IV from 1454456-1453302, reverse complement, Verified ORF
PROTEIN	175	YLR227W-B	0.9979	5	18	2	AVSPTDSTPPSTHTEDSKPISEINLR EVDPNISESNILPSK FLQNSNLGGIIPTVNGKPVR KNIADVMTKPLPIK KYVRPPPMLTSPNDFPNWVK LDQFNYDALTFDEDLNR LNVPLLAPMSQSNTHESSHASK LSAPGQPGLYIDQDELEIDEDEYKEK LVAISDASYGNQPYYK NIADVMTKPLPIK NIPINAIGDLQFHFQDNTK QTNSSLGGIGDSNAYTTINSK SAPSYFISFTDETTK SPSIDASPPENNSSHNIVPIK TVDTTNYVILQGK YLLPSNISVPTINNVHTSESTR YQNSYEPFQYLHTDIFGPVHNLPK YVRPPPMLTSPNDFPNWVK	YLR227W-B,YPR158C-D	YLR227W-B SGDID:S000007376,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr XII from 593440-594744,594746-598708, transposable_element_gene
PROTEIN	176	YJR076C	0.9999	10	2	1	NALLISHLHDLK YRTEALSGESVAAESIRPNLTK	YJR076C	CDC11 SGDID:S000003837,'Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM', Chr X from 576516-575269, reverse complement, Verified ORF
PROTEIN	177	YPR074C	1.0000	308	22	1	ANSGHPGAPLGMAPAAHVLWSQMR EALDFQPPSSGSGNYSGR FFGFTPEGVAER FPELGAELAR ILAVDTVSK KFPELGAELAR KLSETVLEDVYNQLPELIGGSADLTPSNLTR LGNLIAIYDDNK LSGQLPANWESK MNPTNPDWINR MNPTNPDWINRDR MTTTIGYGSLHAGSHSVHGAPLK MTTTIGYGSLHAGSHSVHGAPLKADDVK QNLPQLEGSSIESASK RLSGQLPANWESK SFVVPQEVYDHYQK SLPNIQVWR SLPNIQVWRPADGNEVSAAYK TILKPGVEANNKWNK VVSLPDFFTFDK VVSLPDFFTFDKQPLEYR WKEALDFQPPSSGSGNYSGR	YPR074C	TKL1 SGDID:S000006278,'Transketolase, similar to Tkl2p; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids', Chr XVI from 694835-692793, reverse complement, Verified ORF
PROTEIN	178	YLR262C-A	0.9990	5	2	1	KKQQQDLDPEDIAFK QQQDLDPEDIAFK	YLR262C-A	YLR262C-A SGDID:S000007246,'Similar to C. elegans protein', Chr XII from 669664-669470, reverse complement, Uncharacterized ORF
PROTEIN	179	YLR017W	0.9998	12	2	1	DFVLPQQIIDR HSSYFNDEGLVGHVGFGQPFSQK	YLR017W	MEU1 SGDID:S000004007,'Methylthioadenosine phosphorylase (MTAP), catalyzes the initial step in the methionine salvage pathway; affects polyamine biosynthesis through regulation of ornithine decarboxylase (Spe1p) activity; regulates ADH2 gene expression', Chr XII from 177607-178620, Verified ORF
PROTEIN	180	YDL136W	1.0000	34	4	2	EQLASQLVDLK FEASQVTEK SKEQLASQLVDLK SKEQLASQLVDLKK	YDL191W,YDL136W	RPL35B SGDID:S000002295,'Protein component of the large (60S) ribosomal subunit, identical to Rpl35Ap and has similarity to rat L35 ribosomal protein', Chr IV from 217600-217602,218008-218367, Verified ORF
PROTEIN	181	YHR008C	0.9997	14	3	1	AIWNVVNWK LAGVQGSGWAFIVK WDFGALEPYISGQINELHYTK	YHR008C	SOD2 SGDID:S000001050,'Manganese-containing superoxide dismutase; protects cells against oxygen toxicity', Chr VIII from 123585-122884, reverse complement, Verified ORF
PROTEIN	182	YBL017C	0.9606	2	2	1	FLLFGEAADIGGSSFR TCEENDFEDWNLAEGK	YBL017C	PEP1 SGDID:S000000113,'Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments', Chr II from 191586-186847, reverse complement, Verified ORF
PROTEIN	183	YLR058C	1.0000	180	13	1	AKVDEGSDVLNTWK AKVDEGSDVLNTWKK AVEFAQQVQQSLPK EIYDWAGEYPLAV GAMIFFR HSIDLIASENFTSTSVFDALGTPLSNK ISAVSTYFESFPYR LITSHLVDTDPEVDSIIKDEIER LMGLYLPDGGHLSHGYATENR LVSNGTDSHMVLVSLR VDEGSDVLNTWK VNPETGIIDYDTLEK WGVNVQTLSGSPANLQVYQAIMKPHER	YLR058C	SHM2 SGDID:S000004048,'Cytosolic serine hydroxymethyltransferase, involved in one-carbon metabolism', Chr XII from 259402-257993, reverse complement, Verified ORF
PROTEIN	184	YLR028C	1.0000	52	10	1	AFEHTADYDAAISDFFR ELSASLNLPAAASFK EVSDGVIAPGYEPEALNILSK FITAPSGSVMDK HVSPAGAAVGLPLSDVER LNNVSLSSDAFFPFPDNVYR MSSFGDFIALSNIVDVATAK NHSRVTILSDPNDYSIFLQDLSK TLHPAVHAGILAR VTILSDPNDYSIFLQDLSK	YLR028C	ADE16 SGDID:S000004018,'Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities, isozyme of Ade17p; ade16 ade17 mutants require adenine and histidine', Chr XII from 201316-199541, reverse complement, Verified ORF
PROTEIN	185	YDR148C	0.9199	3	1	1	NAESLSVLDIENEIVR	YDR148C	KGD2 SGDID:S000002555,'Dihydrolipoyl transsuccinylase, a component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a step in the tricarboxylic acid (TCA) cycle, the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA', Chr IV from 755063-753672, reverse complement, Verified ORF
PROTEIN	186	YBL066C	0.9847	2	4	1	DSDQDQDFSSAHMK KFSSNGIYNGTSSTGGITDRK LTDFFQQQSAGWIEGNSSNDDFFGWFDMNMEQGF SLSYQLGLHRGEFISEFTR	YBL066C	SEF1 SGDID:S000000162,'Putative transcription factor, has homolog in Kluyveromyces lactis', Chr II from 100117-96671, reverse complement, Verified ORF
PROTEIN	187	YDL168W	0.9981	3	3	1	GALKVEEFITHR KPLSVEEITVDAPK LIEMTDGGLDFTFDCTGNTK	YDL168W	SFA1 SGDID:S000002327,'Bifunctional enzyme containing both alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase activities, functions in formaldehyde detoxification and formation of long chain and complex alcohols, regulated by Hog1p-Sko1p', Chr IV from 159605-160765, Verified ORF
PROTEIN	188	YEL037C	1.0000	28	5	1	EKVPLDLEPSNTILETK QVVSGNPEALAPLLENISAR TESASTPGFVVGTER VPLDLEPSNTILETK VTEPPIAPESATTPGR	YEL037C	RAD23 SGDID:S000000763,'Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) during nucleotide excision repair; regulates Rad4p levels, subunit of Nuclear Excision Repair Factor 2 (NEF2); homolog of human HR23A and HR23B proteins', Chr V from 82603-81407, reverse complement, Verified ORF
PROTEIN	189	YIL062C	1.0000	13	7	1	IDIDAFDPESGR ITQVSGVTPIVHYISDR LTAADLVPPYETTVTLQELQPR QGGVLLAWLER RIDIDAFDPESGR SLATSGDSLGAVQLLTTDPPYSADAPTKEQYFK SVLEALTQVR	YIL062C	ARC15 SGDID:S000001324,'Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches', Chr IX from 244459-243995, reverse complement, Verified ORF
PROTEIN	190	YMR300C	1.0000	12	4	1	VLIVDDSIVR VSGLAGSMGIAHLR VYFASAAPAIR YRDLKPGEAVIIPK	YMR300C	ADE4 SGDID:S000004915,'Phosphoribosylpyrophosphate amidotransferase (PRPPAT; amidophosphoribosyltransferase), catalyzes first step of the 'de novo' purine nucleotide biosynthetic pathway', Chr XIII from 867090-865558, reverse complement, Verified ORF
PROTEIN	191	YLR008C	0.9635	5	1	1	EALQILNLTENTLTK	YLR008C	PAM18 SGDID:S000003998,'Constituent of the mitochondrial import motor associated with the presequence translocase, along with Ssc1p, Tim44p, Mge1p, and Pam16p; stimulates the ATPase activity of Ssc1p to drive mitochondrial import; contains a J domain', Chr XII from 166082-165576, reverse complement, Verified ORF
PROTEIN	192	YGR211W	0.9997	5	3	1	LLLTSIPYFR TKEQNEDLGLSDIKVE VGSANPQFLSDATDIENFNNEVQTFR	YGR211W	ZPR1 SGDID:S000003443,'Essential protein with two zinc fingers, present in the nucleus of growing cells but relocates to the cytoplasm in starved cells via a process mediated by Cpr1p; binds to translation elongation factor eEF-1 (Tef1p)', Chr VII from 915246-916706, Verified ORF
PROTEIN	193	YML007W	0.9673	4	3	1	DSSKEGNNLFGEFLEDDDDDK NLDSNMFSNDFNFENQFDEQVSEFCSKMNQVCGTR QLPSPNDPSHSAPMPINQTQK	YML007W	YAP1 SGDID:S000004466,'Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance; mediates pleiotropic drug and metal resistance; localized to the nucleus in response to the presence of oxidants', Chr XIII from 253848-255800, Verified ORF
PROTEIN	194	YMR194W	1.0000	74	5	2	AKVEEMNNIIAASR EIAGLSPYER RLIDLIR TGIAIGLNK VEEMNNIIAASR	YMR194W,YPL249C-A	RPL36A SGDID:S000004807,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Bp and has similarity to rat L36 ribosomal protein; binds to 5.8 S rRNA', Chr XIII from 651144-651159,651623-651909, Verified ORF
PROTEIN	195	YMR202W	1.0000	14	2	1	DALASHYGDEYINR HNAAEGLSTEDLLQDVR	YMR202W	ERG2 SGDID:S000004815,'C-8 sterol isomerase, catalyzes the isomerization of the delta-8 double bond to the delta-7 position at an intermediate step in ergosterol biosynthesis', Chr XIII from 667536-668204, Verified ORF
PROTEIN	196	YGR245C	1.0000	12	3	1	AAMLPTNIILLQNLVK APLAIDEILLQDLVEYK RPQFGADNSVQGIAGIELLAK	YGR245C	SDA1 SGDID:S000003477,'Highly conserved nuclear protein required for actin cytoskeleton organization and passage through Start, plays a critical role in G1 events, binds Nap1p, also involved in 60S ribosome biogenesis', Chr VII from 982073-979770, reverse complement, Verified ORF
PROTEIN	197	YGR181W	0.9845	1	1	1	NQIAQELAVANATELVNK	YGR181W	TIM13 SGDID:S000003413,'Mitochondrial intermembrane space protein, forms a complex with TIm8p that medates import and insertion of a subset of polytopic inner membrane proteins; may prevent aggregation of incoming proteins in a chaperone-like manner', Chr VII from 858292-858609, Verified ORF
PROTEIN	198	YER007C-A	0.9999	12	3	1	FPEAYPTVQVDR IEDVIDELIPK LVHKFPEAYPTVQVDR	YER007C-A	YER007C-A SGDID:S000002957,'Hypothetical protein', Chr V from 166884-166874,166770-166236, reverse complement, Uncharacterized ORF
PROTEIN	199	YMR083W	0.9792	5	4	1	EALDFFSR IVGLSELPK YSGVCHTDLHAWHGDWPLPVK YVVDTSK	YMR083W	ADH3 SGDID:S000004688,'Mitochondrial alcohol dehydrogenase isozyme III; involved in the shuttling of mitochondrial NADH to the cytosol under anaerobic conditions and ethanol production', Chr XIII from 434787-435914, Verified ORF
PROTEIN	200	YGR086C	1.0000	63	7	1	AAFNYQFDSIIEHSEK AEAESLVAEAQLSNITR ALLELLDDSPVTPGETRPAYDGYEASK APTASQLQNPPPPPSTTK IEVLEQELVR QIIIDAESALNEWTLDSAQVKPTLSFK QLSIWGLENDDDVSDITDK	YGR086C	PIL1 SGDID:S000003318,'Integral membrane protein that along with Lsp1p is a primary component of eisosomes, large immobile patch structures at the cell cortex associated with endocytosis; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways', Chr VII from 650621-649602, reverse complement, Verified ORF
PROTEIN	201	YHR205W	0.9253	2	1	1	EAAAAAYGPDTDIPR	YHR205W	SCH9 SGDID:S000001248,'Protein kinase that regulates signal transduction activity and G1 progression, controls cAPK activity, required for nitrogen activation of the FGM pathway, involved in life span regulation, homologous to mammalian Akt/PKB', Chr VIII from 509363-511837, Verified ORF
PROTEIN	202	YKL182W	1.0000	443	41	1	AHPNFPIALQWTGGR AIFPNTVDGDLLK ALDTVTNVLNFIK ALIENWAADSVSSR ATHILDFGPGGASGLGVLTHR ATSSTDEESWFK DIQIPVYDTFDGSDLR DLATMTYEEVAK DSLWQSEHLEAVVDQDVQR EFDETIFNLPK ENIIQMEMIENR EYFQDVYDLTGSEPIK FDYPPMPFDGFLFGSR FEIFFK FLGYVSSLVEPSK FLPVASPFHSHLLVPASDLINK FLPVASPFHSHLLVPASDLINKDLVK FSAETLSELIR GLLSATQFTQPALTLMEK GNYTDFENTFQK HFASYANLPGTITHGMFSSASVR ILPEPTEGFAADDEPTTPAELVGK IVDVVGTLSR KNPNWLEEYHPK LLGFTPGELR LLQENDTTLVK LWIDEPFNLDFDPR MIPGAKPLQVGDVVSTTAVIESVVNQPTGK NLVVSGPPQSLYGLNLTLR NPNWLEEYHPK SLSLEEVEGHLFEIIDEASK SNYGMIAINPGR STNSWFDVTWR TFTGDFLR TLSLIQSYSLLDKPDEAIEK TVVTLSEPVQGELKPTVILK VAASFSQEALQYVVER VIVAGTLDINPDDDYGFK VNLENPIPIAVLDSYTPSTNEPYAR YIPNLTAKPFQVTK YLGLKPGSIDAISQVINIAK	YKL182W	FAS1 SGDID:S000001665,'Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities', Chr XI from 100676-106831, Verified ORF
PROTEIN	203	YDL065C	0.9999	2	2	1	DSDGVQVANESEEDPELK VTELLDELEQLGDSPIR	YDL065C	PEX19 SGDID:S000002223,'Chaperone and import receptor for newly-synthesized class I peroxisomal membrane proteins (PMPs), binds PMPs in the cytoplasm and delivers them to the peroxisome for subsequent insertion into the peroxisomal membrane', Chr IV from 337277-336249, reverse complement, Verified ORF
PROTEIN	204	YHR163W	1.0000	7	2	1	ASLTHQLGEFIVK VSVSGGSLIDALYESLVADESLSSR	YHR163W	SOL3 SGDID:S000001206,'6-phosphogluconolactonase, catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p', Chr VIII from 423726-424475, Verified ORF
PROTEIN	205	YIL052C	0.9783	5	3	1	AFLIEEQK CGDCGSALQGISTLRPR IVRAFLIEEQKIVK	YIL052C	RPL34B SGDID:S000001314,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Ap and has similarity to rat L34 ribosomal protein', Chr IX from 257061-257025,256552-256224, reverse complement, Verified ORF
PROTEIN	206	YOL030W	0.9172	6	1	1	QIPVGYSAADIVANR	YOL030W	GAS5 SGDID:S000005390,'Putative 1,3-beta-glucanosyltransferase, has similarity to Gas1p; localizes to the cell wall', Chr XV from 268188-269642, Verified ORF
PROTEIN	207	YER012W	0.9620	4	1	1	NKPELYQIDYLGTK	YER012W	PRE1 SGDID:S000000814,'20S proteasome beta-type subunit; localizes to the nucleus throughout the cell cycle', Chr V from 177834-178430, Verified ORF
PROTEIN	208	YLR301W	1.0000	14	5	1	ELWQPVDPSREDLVIVSPNNEK LLFQVGPHPNER NNNTIEGLNFIR SEFLLSYGK WIQGFLSQK	YLR301W	YLR301W SGDID:S000004292,'Hypothetical protein', Chr XII from 730827-731561, Uncharacterized ORF
PROTEIN	209	YJR072C	0.9281	3	1	1	TPPYVINLDPAVLR	YJR072C	NPA3 SGDID:S000003833,'Cytoplasmic protein required for cell viability, identified by association with pre-ribosomal particles', Chr X from 572039-570882, reverse complement, Verified ORF
PROTEIN	210	SHUFF_YBL004W	0.9407	2	3	1	GTSFADNVTCKYFVSIDPSSSSRDK KLLTRLFLFR LLDTEADLPITASNTFLLILKFNLELLIR	SHUFF_YBL004W	UTP20 SGDID:S000000100,'Component of the small-subunit (SSU) processome, which is involved in the biogenesis of the 18S rRNA', Chr II from 227639-235120, Verified ORF
PROTEIN	211	YFR044C	1.0000	133	14	1	AIQIPAVSSDESLR DIEFSVEELNAATGSK FISEQLSQSGFHDIK GVTDDTGPLLSWINVVDAFK IDSLKPQFFSR ILIDGIDEMVAPLTEK ILIDGIDEMVAPLTEKEK LDISNFVGGMK LVYGVDPDFTR MVDLGIQPPPISTPNLSLPPVILSR TELIHDGAYWVSDPFNAQFTAAK TMAAYLQYYSESPEN TVLVYGHYDVQPAQLEDGWDTEPFK YPSLSIHGVEGAFSAQGAK	YFR044C	YFR044C SGDID:S000001940,'Putative protein of unknown function; gene expression regulated by Abf1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and mitochondrion; YFR044C is not an essential gene', Chr VI from 241424-239979, reverse complement, Uncharacterized ORF
PROTEIN	212	YDR212W	1.0000	11	7	1	EIGDGTTSVVIIASELLK IIDAGAQVVLTTK ILVELAQQQDR IVDEIHAGVLEPTISK MAMGVQINIDDPEQLEQIRK NQNVLATMAVANVVK NYGLDLIR	YDR212W	TCP1 SGDID:S000002620,'Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol; involved in maintenance of actin cytoskeleton; homolog to Drosophila melanogaster and mouse tailless complex polypeptide', Chr IV from 887229-888908, Verified ORF
PROTEIN	213	YOR103C	0.9679	6	1	1	VTSTSSAVLTDFQETFK	YOR103C	OST2 SGDID:S000005629,'Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-linked glycosylation of newly synthesized proteins', Chr XV from 516842-516450, reverse complement, Verified ORF
PROTEIN	214	YOR254C	1.0000	38	8	1	AYESLTDELVR FDINDWEIGTIK IPLGQPAPETVGDFFFR LFDPYEILGISTSASDRDIK NLNDDKDFFDKR QPLVPYSFAPFFPTK RNIIIIVGWILVAILLQRINSNDAIK YGHPDGPQSTSHGIALPR	YOR254C	SEC63 SGDID:S000005780,'Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER', Chr XV from 807024-805033, reverse complement, Verified ORF
PROTEIN	215	YHR174W	1.0000	2021	32	1	AADALLLK AAQDSFAANWGVMVSHR AVDDFLLSLDGTANK AVYAGENFHHGDKL DGKYDLDFKNPESDK GNPTVEVELTTEK GVMNAVNNVNNVIAAAFVK IATAIEK IEEELGDK IEEELGDKAVYAGENFHHGDK IEEELGDKAVYAGENFHHGDKL IGLDCASSEFFK IGSEVYHNLK IGSEVYHNLKSLTK KAADALLLK LGANAILGVSMAAAR NPESDKSK NVPLYQHLADLSK RYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK SGETEDTFIADLVVGLR SIVPSGASTGVHEALEMR SIVPSGASTGVHEALEMRDEDK SIVPSGASTGVHEALEMRDEDKSK SKLGANAILGVSMAAAR TAGIQIVADDLTVTNPAR TFAEAMR TSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAK VNQIGTLSESIK WLTGVELADMYHSLMK YDLDFKNPESDK YDLDFKNPESDKSK YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK	YHR174W	ENO2 SGDID:S000001217,'Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is induced in response to glucose', Chr VIII from 451327-452640, Verified ORF
PROTEIN	216	YLR441C	0.9999	55	12	1	DIFPLQNIHVR EVQGSTLAQLTSK EWFDIK FDVGALMALHGEGSGEEK FDVGALMALHGEGSGEEKGK IFAIAFTR KVTGFKDEVLETV LIPEVINKEIENATK NLLTNFHGMDFTTDK NLLTNFHGMDFTTDKLR VTGFKDEVLETV VVDPFTR	YLR441C	RPS1A SGDID:S000004433,'Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Bp and has similarity to rat S3a ribosomal protein', Chr XII from 1018905-1018138, reverse complement, Verified ORF
PROTEIN	217	YGR145W	1.0000	4	3	1	FKEMFEDEEFQVDEDDYDFK IIWLDNVGTENK STSANDVSVYQVSGTNVSR	YGR145W	ENP2 SGDID:S000003377,'Essential nucleolar protein of unknown function; contains WD repeats, interacts with Mpp10p and Bfr2p, and has homology to Spb1p', Chr VII from 781772-783895, Uncharacterized ORF
PROTEIN	218	YIL108W	0.9226	2	1	1	TVQVQHPQLPPITYPIHNQFFK	YIL108W	YIL108W SGDID:S000001370,'Putative metalloprotease', Chr IX from 160884-162974, Uncharacterized ORF
PROTEIN	219	YBR084W	1.0000	45	15	1	AALNAGASHAVTSNHWMEGGK EYTEENIDFVAK EYTEENIDFVAKGVSNLVKQIENIK GAVELAHAVVDATK GAVELAHAVVDATKEPK HLDETTITNAVDFKK ISDINDDDSIHGLLIQLPLPR LDIEKEDPDALTPEEVKR LNINPDTITIR LPVIKPLPLHLESPVPSDIDISR QFVESEKLPVIKPLPLHLESPVPSDIDISR SSIVGNPIASLLK STTTMGLVQALSAHLGKPSIANVR TFGIPVVVAINR YVLVAGITPTPLGEGK	YBR084W	MIS1 SGDID:S000000288,'Mitochondrial C1-tetrahydrofolate synthase, involved in interconversion between different oxidation states of tetrahydrofolate (THF); provides activities of formyl-THF synthetase, methenyl-THF cyclohydrolase, and methylene-THF dehydrogenase', Chr II from 411048-413975, Verified ORF
PROTEIN	220	YDR168W	1.0000	10	5	1	FLLEHLPIISEQQK ILSNLPESSLTDLPAVTK NAHISSEDIHTGFDSSFMNK SLDDSTELEVNLPDFNSKDPEEMK VFEDIPIEEAEK	YDR168W	CDC37 SGDID:S000002575,'Essential Hsp90p co-chaperone; necessary for passage through the START phase of the cell cycle', Chr IV from 790325-791845, Verified ORF
PROTEIN	221	YNL308C	0.9999	5	3	1	EYGAEINADMVK FFEDPESAAAK YEDPNAAEIISYAR	YNL308C	KRI1 SGDID:S000005252,'Essential nucleolar protein required for 40S ribosome biogenesis; physically and functionally interacts with Krr1p', Chr XIV from 55896-54121, reverse complement, Verified ORF
PROTEIN	222	YLR043C	1.0000	76	5	1	FSEQYPQADFYK FSEQYPQADFYKLDVDELGDVAQK LDVDELGDVAQK NEVSAMPTLLLFK TASEFDSAIAQDK	YLR043C	TRX1 SGDID:S000004033,'Cytoplasmic thioredoxin isoenzyme of the thioredoxin system which protects cells against both oxidative and reductive stress, forms LMA1 complex with Pbi2p, acts as a cofactor for Tsa1p, required for ER-Golgi transport and vacuole inheritance', Chr XII from 232014-231703, reverse complement, Verified ORF
PROTEIN	223	YBL099W	1.0000	93	12	1	AQPTEVSSILEER AVDALVPIGR EVAAFAQFGSDLDASTK GIRPAINVGLSVSR GMALNLEPGQVGIVLFGSDR GVSDEANLNETGR IGEFESSFLSYLK STVAQLVQTLEQHDAMK TAVALDTILNQK TGNIVDVPVGPGLLGR VFGLNNIQAEELVEFSSGVK VVDALGNPIDGKGPIDAAGR	YBL099W	ATP1 SGDID:S000000195,'Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr II from 37050-38687, Verified ORF
PROTEIN	224	YLR359W	1.0000	76	7	1	DLPVLGWTHFQPAQLTTLGK ELGLTVVTDEAIEQMR GELPFMATENIIMAMVEK GTTGTQASFLALFHGNHDKVEALDER KIDIDVLAPLSSFAATAHK VLSHQAAAVVKEEGGENDLIER VTELLGFDK	YLR359W	ADE13 SGDID:S000004351,'Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway', Chr XII from 844281-845729, Verified ORF
PROTEIN	225	YMR236W	0.9213	2	1	1	NSVGSVSEVGPDSTQEETPR	YMR236W	TAF9 SGDID:S000004849,'Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3', Chr XIII from 742970-743443, Verified ORF
PROTEIN	226	YDR044W	0.9845	6	2	1	GIGGIFFDDYDERDPQEILK GNDGGGGTSMVIQDGTTFEK	YDR044W	HEM13 SGDID:S000002451,'Coproporphyrinogen III oxidase, an oxygen requiring enzyme that catalyzes the sixth step in the heme biosynthetic pathway; localizes to the mitochondrial inner membrane; transcription is repressed by oxygen and heme (via Rox1p and Hap1p)', Chr IV from 546640-547626, Verified ORF
PROTEIN	227	YER178W	1.0000	60	7	1	AVLAELMGR GPLVLEYETYR GRIPEDTWDFKK KYVDEQVELADAAPPPEAK MHLIDLGIATEAEVK VNGMDILAVYQASK YVDEQVELADAAPPPEAK	YER178W	PDA1 SGDID:S000000980,'E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, catalyzes the direct oxidative decarboxylation of pyruvate to acetyl-CoA, regulated by glucose', Chr V from 546812-548074, Verified ORF
PROTEIN	228	YBR039W	1.0000	14	5	1	DAPTFQESALIADK ISIFYNDPVSSLSFEPSEKPIFNAK KMDEAEQLFYK QAVITNELVDIITGASSLG RHLNDQPNADIVTIGDK	YBR039W	ATP3 SGDID:S000000243,'Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr II from 315575-316510, Verified ORF
PROTEIN	229	SHUFF_YGR109W-B	0.9828	2	3	1	IPAVAVLLNIKEFTLGVR LILIFARKLAPHK SGWLLYDDDQGSTLAAFYQNPTK	SHUFF_YGR109W-B	YGR109W-B SGDID:S000007347,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr VII from 707614-708463,708465-712258, transposable_element_gene
PROTEIN	230	YPR036W	1.0000	30	6	1	ATQAIIGYTFK ILMDSTHFNEIR NIGDGLSSSNNAHSGFK QLLLLGNALPTVQSLSER SVAWDALAR SVQNLIAELLSSDKYGDDTVK	YPR036W	VMA13 SGDID:S000006240,'Subunit H of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase', Chr XVI from 643833-645269, Verified ORF
PROTEIN	231	YDR188W	1.0000	22	5	1	GIDPMSLDVFAK IITDGFEIAR TGIEAFAEALLVIPK VLLTEMQIQSPTAVLIAR VNVTSAEGLQSVLETNLGPK	YDR188W	CCT6 SGDID:S000002596,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, essential protein that is required for the assembly of actin and tubulins in vivo; contains an ATP-binding motif', Chr IV from 836418-838058, Verified ORF
PROTEIN	232	YMR243C	0.9998	11	2	1	FSIIAGGSPSSSQEAFDSHGNTEHGR ILLQATPSTISADQIQR	YMR243C	ZRC1 SGDID:S000004856,'Vacuolar membrane zinc transporter, transports zinc from the cytosol into the vacuole for storage; also has a role in resistance to zinc shock resulting from a sudden influx of zinc into the cytoplasm', Chr XIII from 756165-754837, reverse complement, Verified ORF
PROTEIN	233	YNR034W-A	0.9887	2	2	1	AVGSLTFDENYNLLDTSGVAK KSNAELGRLGYSVYEDAQYIGHAFK	YNR034W-A	YNR034W-A SGDID:S000007525,'Hypothetical protein', Chr XIV from 692563-692859, Uncharacterized ORF
PROTEIN	234	YNL045W	1.0000	24	3	1	GGKPYVFSQLEAIHAR STFTASIESPLPVVFSGIR VPIPAYLIGIASGDLSSAPIGPR	YNL045W	YNL045W SGDID:S000004990,'Leucyl aminopeptidase (leukotriene A4 hydrolase) with epoxide hydrolase activity, metalloenzyme containing one zinc atom; role in vivo is not defined', Chr XIV from 542964-544979, Verified ORF
PROTEIN	235	YGL137W	1.0000	61	10	1	DLLTDESAEMK EVTSWSVPMHSAIDR FSEAAFLGSTYGLGDDAVNDIVTK GEIEEAIENVLPNVEGK GNEEVEQDEPLSLQTK KEEEAPQQQQSEQQPEQGEAVPEPVEEES NAAASDIFTAVIR SIAVHPTKPYVLSGSDDLTVK VVDFEAHPDYIR VWSLGQSTPNFTLTTGQER	YGL137W	SEC27 SGDID:S000003105,'Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport; contains WD40 domains that mediate cargo selective interactions; 45% sequence identity to mammalian beta'-COP', Chr VII from 249874-249891,250092-252743, Verified ORF
PROTEIN	236	YNL212W	0.9901	2	1	1	IRPEHSASILTYTK	YNL212W	VID27 SGDID:S000005156,'Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth', Chr XIV from 247462-249810, Verified ORF
PROTEIN	237	YHR005C-A	0.9925	2	2	1	NESSCLDR YFETNVQVGENMQK	YHR005C-A	MRS11 SGDID:S000003530,'Essential protein of the mitochondrial intermembrane space, forms a complex with Tim9p (TIM10 complex) that mediates insertion of hydrophobic proteins at the inner membrane, has homology to Mrs5p, which is also involved in this process', Chr VIII from 115896-115615, reverse complement, Verified ORF
PROTEIN	238	SHUFF_YLR459W	0.9845	49	1	1	YAILMIADITK	SHUFF_YLR459W	GAB1 SGDID:S000004451,'GPI transamidase subunit, involved in attachment of glycosylphosphatidylinositol (GPI) anchors to proteins; may have a role in recognition of the attachment signal or of the lipid portion of GPI', Chr XII from 1057332-1058516, Verified ORF
PROTEIN	239	YGR074W	0.9665	2	1	1	QIILPDSLNLDSLLVDQK	YGR074W	SMD1 SGDID:S000003306,'Core Sm protein Sm D1; part of heteroheptameric complex (with Smb1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D1', Chr VII from 635716-636156, Verified ORF
PROTEIN	240	YPL043W	1.0000	8	6	1	FGSVKYALPVIDKSTGLAK FMGPDEIEAQK ITGQNNEDEDDADGEDSMLK SIPQDVTDEQLADFFSNFAPIK STPESSEKITGQNNEDEDDADGEDSMLKGK TRPDNEDTGDVGESENK	YPL043W	NOP4 SGDID:S000005964,'Nucleolar protein, essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; contains four RNA recognition motifs (RRMs)', Chr XVI from 469936-471993, Verified ORF
PROTEIN	241	YDL235C	0.9455	2	2	1	MEHFFPNKTELVNTLSDK NLTELDNLGHFLK	YDL235C	YPD1 SGDID:S000002394,'Phosphorelay intermediate protein, phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus', Chr IV from 33918-33415, reverse complement, Verified ORF
PROTEIN	242	YDR099W	0.9941	1	8	1	AVASSGQELSVEER DSTLIMQLLR ISDDILSVLDSHLIPSATTGESK LAEQAERYEEMVENMK QAFDDAIAELDTLSEESYK TASEIATTELPPTHPIR YEEMVENMK YLAEFSSGDAR	YDR099W	BMH2 SGDID:S000002506,'14-3-3 protein, minor isoform; binds proteins and DNA, involved in regulation of many processes including exocytosis and vesicle transport, Ras/MAPK signaling during pseudohyphal development, rapamycin-sensitive signaling, and others', Chr IV from 653604-654425, Verified ORF
PROTEIN	243	YLR196W	1.0000	10	5	1	AFPDMILGEPLDNSMVSLK ATLEEAEGESGVEDDAATGSSNK FIPGMMSTGAMGEK INQLAQLNLDDAK MISATNWVPR	YLR196W	PWP1 SGDID:S000004186,'Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily', Chr XII from 543970-545700, Verified ORF
PROTEIN	244	YDL052C	1.0000	7	4	1	EIGYSPAINDTTLPPQAIEYAALQHDK IKNEPVPSVSISNDVNTHNEGSSVK IPIVPVVVSNTSTLVSPK KGAFHLAQQGKIPIVPVVVSNTSTLVSPK	YDL052C	SLC1 SGDID:S000002210,'1-acyl-sn-gylcerol-3-phosphate acyltransferase, catalyzes the acylation of lysophosphatidic acid to form phosphatidic acid, a key intermediate in lipid metabolism; located in lipid particles and endoplasmic reticulum', Chr IV from 363583-362672, reverse complement, Verified ORF
PROTEIN	245	YDR161W	0.9954	5	2	1	AGLQSEYVDLLQPLLSLTK SPETWSTLGSIK	YDR161W	YDR161W SGDID:S000002568,'interacts with PP2C', Chr IV from 779040-780203, Uncharacterized ORF
PROTEIN	246	YOR285W	1.0000	14	3	1	EPSEYSIVHIPASINVPYR SHPDAFALDPLEFEK VASSHGYSNTSLYPGSMNDWVSHGGDKLDL	YOR285W	YOR285W SGDID:S000005811,'Protein of unknown function, localized to the mitochondrial outer membrane', Chr XV from 849634-850053, Verified ORF
PROTEIN	247	YLL022C	0.9982	2	2	1	LALHELANFSPANEHDDEIEDVSQLRK RPLSQPTTSIGFPALEKPLGDFNDLSQLVK	YLL022C	HIF1 SGDID:S000003945,'Non-essential component of the HAT-B histone acetyltransferase complex (Hat1p-Hat2p-Hif1p), localized to the nucleus; has a role in telomeric silencing', Chr XII from 100200-99043, reverse complement, Verified ORF
PROTEIN	248	YDR120C	1.0000	15	4	1	ILSAMPGWLSGTVK INIEDFNIVK LSFAPNEQSGNIEK NEPYINILEALSATGLR	YDR120C	TRM1 SGDID:S000002527,'tRNA methyltransferase, localizes to both the nucleus and mitochondrion to produce the modified base N2,N2-dimethylguanosine in tRNAs in both compartments', Chr IV from 693258-691546, reverse complement, Verified ORF
PROTEIN	249	YJL012C	1.0000	89	14	1	FPYAVLEVK HLPVLVFNTNK HLPVLVFNTNKEFER ISLDTELTMVR ISQLYDIAR KPPLPTNIEITRPGR LDSKPFFKENYDELVVK LQTQLGQEPPEWVR RTDIGVDWPFK TDIGVDWPFK TGFILKPVFQVR WYGGMSTDTIFVER YTVDQVFAK YWVHPDNITELK	YJL012C	VTC4 SGDID:S000003549,'Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion', Chr X from 413315-411150, reverse complement, Verified ORF
PROTEIN	250	YMR246W	1.0000	34	5	1	FVIHNEPIDPSDKR LVDVEDLGYFAK NPEETAAAFTDDGWFR RDILAAVKPDVER VKPVGIVVPNLGHLSK	YMR246W	FAA4 SGDID:S000004860,'Long chain fatty acyl-CoA synthetase, regulates protein modification during growth in the presence of ethanol, functions to incorporate palmitic acid into phospholipids and neutral lipids', Chr XIII from 759806-761890, Verified ORF
PROTEIN	251	YGR020C	1.0000	9	3	1	NFFVYQEGK TLIAVIADEDTTTGLLLAGIGQITPETQEK VDSFTNAFPAILEIPSKDHPYDPEKDSVLK	YGR020C	VMA7 SGDID:S000003252,'Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane', Chr VII from 527333-526977, reverse complement, Verified ORF
PROTEIN	252	YKR043C	1.0000	29	3	1	NNQFLNPDNITYIFTSPR QTVDLVLKPLSDEQR SGQYTGLTDLPLTPYGEGQMLR	YKR043C	YKR043C SGDID:S000001751,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus', Chr XI from 521354-520539, reverse complement, Uncharacterized ORF
PROTEIN	253	YGR244C	0.9925	5	3	1	FGFDDNASFR QTGIAGKPVSAVYIVK SGVHMIESPQQAEDVAK	YGR244C	LSC2 SGDID:S000003476,'Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate', Chr VII from 979324-978041, reverse complement, Verified ORF
PROTEIN	254	YGR063C	0.9987	8	1	1	LPAEVVELLPHYKPR	YGR063C	SPT4 SGDID:S000003295,'Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing; in addition, Spt4p is involved in kinetochore function and gene silencing', Chr VII from 617828-617520, reverse complement, Verified ORF
PROTEIN	255	YPL093W	1.0000	37	6	1	DIPTVAPANDLLDIVLNR GFPNINDVHPFHR KLRDPLAYLEQVR LFHSIKPLFANK MEEHMSTLGHDMSALQDK NVYDFLDPEIAAK	YPL093W	NOG1 SGDID:S000006014,'Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins', Chr XVI from 370975-372918, Verified ORF
PROTEIN	256	YPL160W	1.0000	260	26	1	AAAR ADMIAAGEAFVYNEPESQVMSR AMPFISLLK DGQACMDHDR DIFTGEEVEIPPVTK EDYYTGTMIYGPYKGEK ELQFSEIDTVK GFYKPIVTVPGK GVLAALDYLR IAEFSAISFPYGAK IAFADAGDTVEDANFDESNANAAILR IEALEFADDAAK IHAPQSVYPELR ILPMETVIATK NAFEGVLDWLK NFDNVPAEEEEIKEETPAEKDHEDVTK NTNIPLPALQK QSGEGVTPQEYIGVK RALFPLGFHCTGMPILACADK RGFYKPIVTVPGK SFVTTDANPYYDAFIR STGNFMTLEQTVEK TGKDIFTGEEVEIPPVTK TYEQYALTNYK VKADMIAAGEAFVYNEPESQVMSR YGLFDFQAAR	YPL160W	CDC60 SGDID:S000006081,'Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA', Chr XVI from 246989-250261, Verified ORF
PROTEIN	257	YOR101W	0.9462	2	2	1	QAINVDEAFYSLIR VSILDILDTAGQEEYSAMR	YOR101W	RAS1 SGDID:S000005627,'GTPase involved in G-protein signaling in the adenylate cyclase activating pathway, plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes', Chr XV from 515245-516174, Verified ORF
PROTEIN	258	YML101C	0.9845	6	1	1	TVQDAKPAPSVATNDPSPEPVPSAPEER	YML101C	CUE4 SGDID:S000004568,'Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination', Chr XIII from 70088-69735, reverse complement, Uncharacterized ORF
PROTEIN	259	SHUFF_YDR479C	0.9079	1	1	1	NGGFSYMMDEDEDSK	SHUFF_YDR479C	PEX29 SGDID:S000002887,'Peroxisomal integral membrane protein, involved in regulation of peroxisome size and number; genetic interactions suggest that Pex28p and Pex29p act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p', Chr IV from 1416866-1415202, reverse complement, Verified ORF
PROTEIN	260	YMR108W	1.0000	166	17	1	AQDEFVMQSINK AQIPVTTTLQGLGSFDQEDPK ERSEWFAQINKWK EYPYAYMEETPGSK GPVLLEVEVDK INEAFEIATSGR INEAFEIATSGRPGPVLVDLPK KPVLYVGAGILNHADGPR KVPVLPMVAGGSGLDEFINFDPEVER PGPVLVDLPK QNVDTVFGYPGGAILPVYDAIHNSDK RPEPAPSFNVDPLEQPAEPSK SEWFAQINK TTLPSNALNQLTSR VPVLPMVAGGSGLDEFINFDPEVER VVQTQIAVEGDATTNLGK YSHTHQLNPDFIK	YMR108W	ILV2 SGDID:S000004714,'Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis and is the target of several classes of inhibitors, localizes to the mitochondria; expression of the gene is under general amino acid control', Chr XIII from 484083-486146, Verified ORF
PROTEIN	261	YPL126W	0.9040	3	1	1	FELNLQDPIITDLK	YPL126W	NAN1 SGDID:S000006047,'U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA', Chr XVI from 310209-312899, Verified ORF
PROTEIN	262	YJL033W	0.9999	8	3	1	AQAQEDEDDDFISVK FELERISRINILIGTPGR SIKPQLQSLLFKDPELK	YJL033W	HCA4 SGDID:S000003570,'Putative nucleolar DEAD box RNA helicase; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis', Chr X from 383754-386066, Verified ORF
PROTEIN	263	YNL113W	1.0000	38	3	1	HIQEEEEQDVDMTGDEEQEEEPDREK IQTYGETTAVDALQK LLTQATSEDGTSASFQIVEEDHTLGNALR	YNL113W	RPC19 SGDID:S000005057,'RNA polymerase subunit, common to RNA polymerases I and III', Chr XIV from 412773-413201, Verified ORF
PROTEIN	264	YLL021W	0.9999	8	4	1	HYSDDDDSSYQFVPMKHEEQEQEQNR KPASFLNDVEEEESPVKPLK RIGEDANQPDYLLPKANFHMK YVSPIKAVTSASNSASSNISEIPK	YLL021W	SPA2 SGDID:S000003944,'Component of the polarisome, which functions in actin cytoskeletal organization during polarized growth; acts as a scaffold for Mkk1p and Mpk1p cell wall integrity signaling components; potential Cdc28p substrate', Chr XII from 100946-105346, Verified ORF
PROTEIN	265	YER165W	1.0000	339	17	1	AIEQLNYTPIK ALYDTFSVFGDILSSK AVEALNDSELNGEK FGPIVSASLEK FGPIVSASLEKDADGK FGPIVSASLEKDADGKLK GFGFVHFEEEGAAK GFGFVNYEK GFGFVNYEKHEDAVK GVPFNGPNPQQMNPMGGMPK NGPVYGVPPQGGFPR NINSETTDEQFQELFAK NLDDSVDDEKLEEEFAPYGTITSAK NQQIVAGKPLYVAIAQR TAEQLENLNIQDDQK TSLGYAYVNFNDHEAGR YQGVNLFVK	YER165W	PAB1 SGDID:S000000967,'Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G', Chr V from 510368-512101, Verified ORF
PROTEIN	266	YMR058W	0.9395	3	2	1	DLHVDPEVLLNEVDENEER DTLYVRPQSNFVIR	YMR058W	FET3 SGDID:S000004662,'Ferro-O2-oxidoreductase required for high-affinity iron uptake and involved in mediating resistance to copper ion toxicity, belongs to class of integral membrane multicopper oxidases', Chr XIII from 388821-390731, Verified ORF
PROTEIN	267	YEL002C	1.0000	15	4	1	EQIVPILNAPR LFDNIIVFPTK LFLNELGIYPSPK TLVLYDQSTEPLEEYSVYLK	YEL002C	WBP1 SGDID:S000000728,'Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex; required for N-linked glycosylation of proteins in the endoplasmic reticulum', Chr V from 150013-148721, reverse complement, Verified ORF
PROTEIN	268	YDR510W	1.0000	43	3	1	FLYDGIR IQADQTPEDLDMEDNDIIEAHR VSDGSSEIFFK	YDR510W	SMT3 SGDID:S000002918,'Ubiquitin-like protein of the SUMO family, conjugated to lysine residues of target proteins; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics', Chr IV from 1469392-1469697, Verified ORF
PROTEIN	269	YNL222W	0.9845	3	1	1	VLQEAGYNVSSYGTGSAVR	YNL222W	SSU72 SGDID:S000005166,'Transcription/RNA-processing factor that associates with TFIIB and cleavage/polyadenylation factor Pta1p; exhibits phosphatase activity on serine-5 of the RNA polymerase II C-terminal domain; affects start site selection in vivo', Chr XIV from 229095-229715, Verified ORF
PROTEIN	270	YLR291C	0.9281	8	2	1	LSPLYPFDVEK TPVFAVAGLYK	YLR291C	GCD7 SGDID:S000004282,'Beta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression', Chr XII from 719464-718319, reverse complement, Verified ORF
PROTEIN	271	YNL074C	0.9942	4	2	1	TNSATLPSSESSPASPDLK TTELPATSPYVSPQQSAR	YNL074C	MLF3 SGDID:S000005018,'Serine-rich protein of unknown function; overproduction suppresses the growth inhibition caused by exposure to the immunosuppressant leflunomide', Chr XIV from 488125-486767, reverse complement, Verified ORF
PROTEIN	272	YNL044W	0.9994	10	3	1	FTQNFSMENIK TPQEFFNFK TPQEFFNFKK	YNL044W	YIP3 SGDID:S000004989,'Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p', Chr XIV from 545269-545292,545372-545878, Verified ORF
PROTEIN	273	YML048W	1.0000	9	4	1	AAAPGIQLVAGEGFQSPLEDR ILEEYDGDIGK TGLADLMVLRPSIFHEK TGLADLMVLRPSIFHEKEPVK	YML048W	GSF2 SGDID:S000004511,'ER localized integral membrane protein that may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression', Chr XIII from 178426-179637, Verified ORF
PROTEIN	274	YPR072W	0.9172	4	2	1	EGIEDFDDIYEKFQSTDPSNSSHR TIQHDVETNAAFQNPLFNDELK	YPR072W	NOT5 SGDID:S000006276,'Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcription initiation and elongation and in mRNA degradation', Chr XVI from 690104-691786, Verified ORF
PROTEIN	275	YDR418W	1.0000	196	8	2	AVGGEVGASAALAPK HSGNIQLDEIIEIAR IGPLGLSPK NPHDIIEGINAGEIEIPEN QAAASVVPSASSLVITALK QAAASVVPSASSLVITALKEPPR QAAASVVPSASSLVITALKEPPRDR VDFKNPHDIIEGINAGEIEIPEN	YDR418W,YEL054C	RPL12B SGDID:S000002826,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins', Chr IV from 1301608-1302105, Verified ORF
PROTEIN	276	YHL034C	1.0000	55	7	1	ATKEEVAEFFGTDADSISLPMR EEVAEFFGTDADSISLPMR ELTVDVAVIRPENDEEEIEQETGSEEKQE GGAR GMAFVTFSGENVDIEAK IDFDNIKENYDTK SKDTLYINNVPFK	YHL034C	SBP1 SGDID:S000001026,'Nucleolar single-strand nucleic acid binding protein; associates with small nuclear RNAs', Chr VIII from 34075-33191, reverse complement, Verified ORF
PROTEIN	277	YGR173W	0.9999	4	4	1	GVRPVFDDPLVVR QQLLADEAGSGGGGGSGFEVAK RGVRPVFDDPLVVR VVLIGYPSVGK	YGR173W	RBG2 SGDID:S000003405,'Protein with similarity to mammalian developmentally regulated GTP-binding protein', Chr VII from 843859-844965, Uncharacterized ORF
PROTEIN	278	YOR027W	1.0000	152	12	1	AAAEYEKGEYETAISTLNDAVEQGR AIEVSETPNHVLYSNR AMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMK EYASALETLDAAR FQPGTSNETPEETYQR GEYETAISTLNDAVEQGR IQTLIAAGIIR KIQTLIAAGIIR LGAAHLGLGDLDEAESNYK LGAAHLGLGDLDEAESNYKK QAQPDLGLTQLFADPNLIENLKK QNPQAIGQDLFTDPR	YOR027W	STI1 SGDID:S000005553,'Hsp90 cochaperone, interacts with the Ssa group of the cytosolic Hsp70 chaperones; activates the ATPase activity of Ssa1p; homolog of mammalian Hop protein', Chr XV from 381053-382822, Verified ORF
PROTEIN	279	YDL055C	1.0000	299	10	1	DFLSGTVLYLNSLAK ETFPILVEEK EYGVNITFSVETEPLGTAGPLK GLILVGGYGTR IGPDVVIGPNVTIGDGVR INAGLYILNPEVIDLIEMKPTSIEK KLATGANIVGNALIDPTAK LATGANIVGNALIDPTAK LRPLTLTVPKPLVEFGNR YGVIVHDIATPNLIDR	YDL055C	PSA1 SGDID:S000002213,'GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure', Chr IV from 356759-355674, reverse complement, Verified ORF
PROTEIN	280	YHL033C	1.0000	35	14	1	HWGGGILGNK LKVPPTIAQFQYTLDR LVSTIDANFADK LVSTIDANFADKYDEVK LVSTIDANFADKYDEVKK MGVPYAIVK NFGIGQAVQPK TSAVAALTEVR TSAVAALTEVRAEDEAALAK VAPAPFGAK VPPTIAQFQYTLDR WPEYVR YGLNHVVALIENK YGLNHVVALIENKK	YHL033C	RPL8A SGDID:S000001025,'Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits', Chr VIII from 36023-35253, reverse complement, Verified ORF
PROTEIN	281	YMR285C	0.9106	2	1	1	VVAPDVAPDQEVEINK	YMR285C	NGL2 SGDID:S000004898,'Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p and Ngl3p', Chr XIII from 841690-840143, reverse complement, Verified ORF
PROTEIN	282	YKL056C	1.0000	166	5	1	AKLQETNPEEVPKFEK DIFSNDELLSDAYDAK EDGTTPFVAIWK LQETNPEEVPKFEK SFLTYIK	YKL056C	YKL056C SGDID:S000001539,'Protein of unknown function; putative ribosomal protein; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YKL056C is not an essential gene', Chr XI from 334559-334056, reverse complement, Verified ORF
PROTEIN	283	YPL037C	1.0000	219	5	1	APADAEKKDEAIPELVEGQTFDADVE KDEAIPELVEGQTFDADVE LHAVTIDNVAEANFFK LHAVTIDNVAEANFFKDDGK VGVQVAAQHNTSVFYGLPQEK	YPL037C	EGD1 SGDID:S000005958,'Subunit beta1 of the nascent polypeptide-associated complex (NAC) involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b', Chr XVI from 481898-481425, reverse complement, Verified ORF
PROTEIN	284	YGL068W	1.0000	19	2	1	GLLGLSLVEAK IVQDISQLTLLETSSLINELK	YGL068W	MNP1 SGDID:S000003036,'Protein associated with the mitochondrial nucleoid; putative mitochondrial ribosomal protein with similarity to E. coli L7/L12 ribosomal protein; required for normal respiratory growth', Chr VII from 375090-375674, Verified ORF
PROTEIN	285	YOR007C	1.0000	69	9	1	DADVDASQGASAGGLPDLGSLLGGGLGGLMNNPQLMQAAQK DAESAISIDPSYFR DDAENVEINIPEDDAETK NMAGNLFGGAGAQSTDETPDNENKQ QMAEGFASGGGTPNLSDLMNNPALR VLDIEGDNATEAMK VLDIEGDNATEAMKR VLPTNAIYYANR VPESNKKDDAENVEINIPEDDAETK	YOR007C	SGT2 SGDID:S000005533,'Glutamine-rich cytoplasmic protein of unknown function, contains tetratricopeptide (TPR) repeats, which often mediate protein-protein interactions; conserved in human and C. elegans', Chr XV from 339979-338939, reverse complement, Verified ORF
PROTEIN	286	YBL047C	1.0000	24	8	1	ESSDTFSAQPPPVPK FVETTVENSNLNVNR LSTGAFSNAASDWSLSFEK QLELNQVTVANLQK SLAVEELSGMGFTEEEAHNALEK SQSLTSSVANNAPQSVRDDVELPETLEER TLQTPYNAQPTSSLEIHTEQVIK TPLSSQEQAFYNQK	YBL047C	EDE1 SGDID:S000000143,'Key endocytic protein involved in a network of interactions with other endocytic proteins, binds membranes in a ubiquitin-dependent manner, may also bind ubiquitinated membrane-associated proteins', Chr II from 132043-127898, reverse complement, Verified ORF
PROTEIN	287	YPL012W	1.0000	27	6	1	AWLLPLIR FNDDAFNFDSEGK GQPKPSTNVDDPLSAVTSGINAYLEAVK NANLATFQNELAPYIK PSTNVDDPLSAVTSGINAYLEAVK QFIVESGDNPLDLLDSQTLAHISSTRPK	YPL012W	RRP12 SGDID:S000005933,'Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; contains HEAT-repeats', Chr XVI from 529720-533406, Verified ORF
PROTEIN	288	YKR001C	1.0000	60	10	1	AEQTYINTAHPDLLK DATIPTNEFVVDIIK EAISNQFIQFLK EIVKETDKVTGANSGISSVPINLR LAALESPPPVLK LQDALAPLGGGSQSPIDLPQITVVGSQSSGK RPLVLQLINR SGFFGGFFSTK VDLMDQGTDVIDILAGR YGYIPVINR	YKR001C	VPS1 SGDID:S000001709,'GTPase required for vacuolar protein sorting, functions in actin cytoskeleton organization via its interaction with Sla1p; required for late Golgi-retention of some proteins including Kex2p; involved in regulating peroxisome biogenesis', Chr XI from 442365-440251, reverse complement, Verified ORF
PROTEIN	289	YBR154C	1.0000	5	2	1	GYFITQEEVELPLEDFK MMSFQANPTEESISK	YBR154C	RPB5 SGDID:S000000358,'RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects transactivation', Chr II from 549003-548356, reverse complement, Verified ORF
PROTEIN	290	YJL020C	1.0000	10	7	1	AIPVMPFVDPSSNPFFR FGAPVGFNPFGMASGVGNKPSEEPK GENVAEESEIGYGHEDR LSMFNQDITEQVPLPK NFVSQIVSEFKDEVIQPIGAR SFVAVQGSEVGKEAESSPNTGSTEQR SHSLINSHIGAK	YJL020C	BBC1 SGDID:S000003557,'Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las17p and with the SH3 domains of Type I myosins Myo3p and Myo5p; localized predominantly to cortical actin patches', Chr X from 402327-398854, reverse complement, Verified ORF
PROTEIN	291	YGL008C	1.0000	488	26	1	ADTGIAVEGATDAAR DGQLVEIPANEVVPGDILQLEDGTVIPTDGR GAPLFVLK GAPLFVLKTVEEDHPIPEDVHENYENK GEGFMVVTATGDNTFVGR GLDAIDKAFLK GYLVAMTGDGVNDAPSLK GYLVAMTGDGVNDAPSLKK LGLGGGGDMPGSELADFVENADGFAEVFPQHK LSAIESLAGVEILCSDK MLTGDAVGIAK PVPEEYLQTDPSYGLTSDEVLK PVPEEYLQTDPSYGLTSDEVLKR QLGLGTNIYNAER RGEGFMVVTATGDNTFVGR SAADIVFLAPGLSAIIDALK SVEDFMAAMQR TLANTAVVIR TVEEDHPIPEDVHENYENK TVEEDHPIPEDVHENYENKVAELASR VLEFHPFDPVSK VLEFHPFDPVSKK VTAVVESPEGER VVEILQNR YGLNQMADEKESLVVK YKVLEFHPFDPVSK	YGL008C	PMA1 SGDID:S000002976,'Plasma membrane H+-ATPase, pumps protons out of the cell; major regulator of cytoplasmic pH and plasma membrane potential; part of the P2 subgroup of cation-transporting ATPases', Chr VII from 482671-479915, reverse complement, Verified ORF
PROTEIN	292	YLR212C	0.9679	2	1	1	AIMMDSEPSVIADVENTFR	YLR212C	TUB4 SGDID:S000004202,'Gamma-tubulin, involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body', Chr XII from 566283-564862, reverse complement, Verified ORF
PROTEIN	293	YDR361C	1.0000	9	2	1	IQLSSLADLILGSPTTTIK KGVISSYMILDHEGLVK	YDR361C	BCP1 SGDID:S000002769,'Essential protein involved in nuclear export of Mss4p, which is a lipid kinase that generates phosphatidylinositol 4,5-biphosphate and plays a role in actin cytoskeleton organization and vesicular transport', Chr IV from 1196255-1195404, reverse complement, Uncharacterized ORF
PROTEIN	294	YPL009C	1.0000	9	5	1	ELNTSSDEDNESEGNTTDSSSDSDSEDMESSK IAQLLNLPLNLK IAQLLNLPLNLKQNKISVK ISALDLLLLAR TLTEILHYFK	YPL009C	YPL009C SGDID:S000005930,'Hypothetical protein', Chr XVI from 538933-535817, reverse complement, Uncharacterized ORF
PROTEIN	295	YOL111C	1.0000	17	5	1	DVTNLGVPLPTLK FLTLATLTEPK STNSPAPAPPQELTVPWDDIEALLK SYTKPLKDVTNLGVPLPTLK VLHDNLFLSDLK	YOL111C	MDY2 SGDID:S000005471,'Nuclear protein required for efficient mating, involved in shmoo formation and nuclear migration in the pre-zygote, contains a ubiquitin-like (UBL) domain', Chr XV from 108896-108258, reverse complement, Verified ORF
PROTEIN	296	YER009W	0.9979	31	2	1	LVSLPFQK NESMLTFETSQLQGAK	YER009W	NTF2 SGDID:S000000811,'Nuclear envelope protein, interacts with GDP-bound Gsp1p and with proteins of the nuclear pore to transport Gsp1p into the nucleus where it is an essential player in nucleocytoplasmic transport', Chr V from 172114-172491, Verified ORF
PROTEIN	297	YNL301C	1.0000	35	4	2	GQNTLILR IFEFPK LYTFLAR TVVVVGTVTDDAR	YOL120C,YNL301C	RPL18B SGDID:S000005245,'Protein component of the large (60S) ribosomal subunit, identical to Rpl18Ap and has similarity to rat L18 ribosomal protein', Chr XIV from 64562-64451,64018-63570, reverse complement, Verified ORF
PROTEIN	298	YGL105W	1.0000	51	7	1	AIKHPDADSLYVSTIDVGDEEGPR EQSAQAAQWESVLK HFPLDAMQER HPDADSLYVSTIDVGDEEGPR SGQIQPHLDQLNLVLR STAMVLCGSNDDKVEFVEPPKDSK VFFEGFGDEAPMK	YGL105W	ARC1 SGDID:S000003073,'Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases (Mes1p and Gus1p), delivering tRNA to them, stimulating catalysis, and ensuring their localization to the cytoplasm; also binds quadruplex nucleic acids', Chr VII from 307440-308570, Verified ORF
PROTEIN	299	SHUFF_YOR335C	0.9984	5	6	1	AAPK DEQINQGCAIDDSDTDEKLDSDEKAGK EFDSTAIQIFDEPSTLDTGYRCLCGK FLDTSLVDLLIDFSAVSDAETPIDAFEEGGSK LASKNGNDILFGNNYTLNPVFCMYGKEEDEGLPTK PMIYLNDVVVLPPFERISIVNVLRLASK	SHUFF_YOR335C	ALA1 SGDID:S000005862,'Cytoplasmic alanyl-tRNA synthetase, required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog', Chr XV from 949106-946230, reverse complement, Verified ORF
PROTEIN	300	YKL216W	1.0000	31	4	1	LPPYFDFAHFDIMAK LRPEIKVIGTGGIK NGFGGIGGEYVKPTALANVR VFAFFK	YKL216W	URA1 SGDID:S000001699,'Dihydroorotate dehydrogenase, catalyzes the fourth enzymatic step in the de novo biosynthesis of pyrimidines, converting dihydroorotic acid into orotic acid', Chr XI from 25216-26160, Verified ORF
PROTEIN	301	YDR171W	1.0000	14	2	1	KSSSFAHLQAPSPIPDPLQVSKPETR SSSFAHLQAPSPIPDPLQVSKPETR	YDR171W	HSP42 SGDID:S000002578,'Small cytosolic stress-induced chaperone that forms barrel-shaped oligomers and suppresses the aggregation of non-native proteins; oligomer dissociation is not required for function; involved in cytoskeleton reorganization after heat shock', Chr IV from 806618-807745, Verified ORF
PROTEIN	302	YIL015W	1.0000	4	2	1	GYEGAPNEYYPNFPQILK YPVLLDSGTSLLNAPK	YIL015W	BAR1 SGDID:S000001277,'Aspartyl protease secreted into the periplasmic space of mating type a cells, helps cells find mating partners, cleaves and inactivates alpha factor allowing cells to recover from alpha-factor-induced cell cycle arrest', Chr IX from 322340-324103, Verified ORF
PROTEIN	303	YFL018C	1.0000	18	5	1	AEEEGIAAVEMLK ALLNNSHLFHQMHTEAQK SHDVVIIGGGPAGYVAAIK VTPVDGLEGTVKEDHILDVK VVGDVTFGPMLAHK	YFL018C	LPD1 SGDID:S000001876,'Dihydrolipoamide dehydrogenase, the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes', Chr VI from 103121-101622, reverse complement, Verified ORF
PROTEIN	304	YGL055W	1.0000	20	3	1	DDSASSGIVDEVDLTEANILATGLNKK FSQNAIEEALIQQEQK INWGPVLTDLPMWDK	YGL055W	OLE1 SGDID:S000003023,'Fatty acid desaturase, required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria', Chr VII from 398631-400163, Verified ORF
PROTEIN	305	YHR013C	0.9980	5	2	1	LDPTYLAPGEK SYYQDGEDAYAMK	YHR013C	ARD1 SGDID:S000001055,'Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p); N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing', Chr VIII from 131440-130724, reverse complement, Verified ORF
PROTEIN	306	YGR208W	0.9253	4	1	1	LLQGLQVDTLYDEIK	YGR208W	SER2 SGDID:S000003440,'Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthesis, expression is regulated by the available nitrogen source', Chr VII from 911888-912817, Verified ORF
PROTEIN	307	SHUFF_YJL197W	0.9974	3	4	1	CGDEFLIDEEYFSFKITQDESIEDTNHTR MTKLATEWNTDIMQNAGTIDINFK TEISSINDECSFEYCQNEEK VQLVINSDTFIASR	SHUFF_YJL197W	UBP12 SGDID:S000003733,'Ubiquitin-specific protease present in the nucleus and cytoplasm that cleaves ubiquitin from ubiquitinated proteins', Chr X from 63804-67568, Verified ORF
PROTEIN	308	YLR027C	1.0000	75	10	1	ASIAGLNQGNVEYVAK IIFGTQSDAFQEDR LIHNDSSYNHEYLGITGLPSLTSNAAK LLETPELTEQWHK NHIALFDTAYQGFATGDLDKDAYAVR PTWANHMAIFENQGLK RLEETHAVYLVASGR SLDLNGFLNAIQK TATYPYWANETK VISVQSLSGTGALHISAK	YLR027C	AAT2 SGDID:S000004017,'Cytosolic aspartate aminotransferase, involved in nitrogen metabolism; localizes to peroxisomes in oleate-grown cells', Chr XII from 198086-196830, reverse complement, Verified ORF
PROTEIN	309	YGL245W	1.0000	182	13	1	AALLNQYFAQAYK ANFEIDLPDAK APIVAYAELIAAR DGKPYVFFTIPDGK DVVPVDLVDFDHLITK FPPEPSGYLHIGHAK IGDIIQFER IVNALAPNSIAIK LDDATEDVFNK LSQSLETLDSQLNLR NAQYDWMLQALR TFILGGLK VHIWDFAR	YGL245W	GUS1 SGDID:S000003214,'Glutamyl-tRNA synthetase (GluRS), forms a complex with methionyl-tRNA synthetase (Mes1p) and Arc1p; complex formation increases the catalytic efficiency of both tRNA synthetases and ensures their correct localization to the cytoplasm', Chr VII from 39023-41149, Verified ORF
PROTEIN	310	YPR181C	1.0000	78	10	1	AETDDGADVIRWLDRTLIK AGYQDDPQYADFK ALLEEPKLEAAELLVDRFPLPR FFLPLEQVEFK FTWNVFPSTR IILFASGPGTVAPGLIVNSELKDPLR LNPSDNYQDMAR LNQLLENLSPDQWSVPAGHRPLR QLTDSTGGVLLLTDAFSTAIFK SQFLSVFNNSPDETAFYR	YPR181C	SEC23 SGDID:S000006385,'GTPase-activating protein; component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat, involved in ER to Golgi transport and autophagy; stimulates the GDP-bound form of Sar1p', Chr XVI from 899663-897357, reverse complement, Verified ORF
PROTEIN	311	YBR106W	1.0000	60	3	1	APSLFGGMGQTGPK IHLFGKPATGDLK YVEPGNAMSGEGEKLQVTTVR	YBR106W	PHO88 SGDID:S000000310,'Probable membrane protein, involved in phosphate transport; pho88 pho86 double null mutant exhibits enhanced synthesis of repressible acid phosphatase at high inorganic phosphate concentrations', Chr II from 452652-453218, Verified ORF
PROTEIN	312	YHR018C	0.9983	18	3	1	DIVNDTLFPALK LNQSPLGAGALAGHPYGIDR VFGDLTGFLMSLK	YHR018C	ARG4 SGDID:S000001060,'Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway', Chr VIII from 141395-140004, reverse complement, Verified ORF
PROTEIN	313	YPL078C	1.0000	14	2	1	IDSVSQLQNVAETTK VLQQSISEIEQLLSK	YPL078C	ATP4 SGDID:S000005999,'Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr XVI from 408741-408007, reverse complement, Verified ORF
PROTEIN	314	YDR399W	1.0000	44	4	1	MAIEQGNDIFIPEQEHKQ NVLIVDEVDDTR TNFGIFVLHDK TTLHYALSELEKDAAEQAK	YDR399W	HPT1 SGDID:S000002807,'Dimeric hypoxanthine-guanine phosphoribosyltransferase, catalyzes the formation of both inosine monophosphate and guanosine monophosphate; mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome', Chr IV from 1270060-1270725, Verified ORF
PROTEIN	315	YGR192C	1.0000	1212	24	1	DPANLPWGSSNVDIAIDSTGVFK DPANLPWGSSNVDIAIDSTGVFKELDTAQK DWRGGRTASGNIIPSSTGAAK ELDTAQK ELDTAQKHIDAGAK GVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPK IATYQERDPANLPWGSSNVDIAIDSTGVFK IATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQK IVSNASCTTNCLAPLAK KIATYQERDPANLPWGSSNVDIAIDSTGVFK KVVITAPSSTAPMFVMGVNEEK KVVITAPSSTAPMFVMGVNEEKYTSDLK LTGMAFR LVSWYDNEYGYSTR TASGNIIPSSTGAAK VAINGFGR VINDAFGIEEGLMTTVHSLTATQK VLPELQGK VPTVDVSVVDLTVK VVDLVEHVAK VVDLVEHVAKA VVITAPSSTAPMFVMGVNEEK VVITAPSSTAPMFVMGVNEEKYTSDLK YAGEVSHDDKHIIVDGK	YGR192C	TDH3 SGDID:S000003424,'Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall ', Chr VII from 883815-882817, reverse complement, Verified ORF
PROTEIN	316	YDL078C	1.0000	26	7	1	AQQLVGDNSIEYFSLPIVLR FKPGNVMGVTNLDLVR ILVISNPVNSLVPIAVETLK ILVISNPVNSLVPIAVETLKK KVTVIGGHSGETIIPIITDK MVKVAILGASGGVGQPLSLLLK VAILGASGGVGQPLSLLLK	YDL078C	MDH3 SGDID:S000002236,'Cytoplasmic malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate; involved in the glyoxylate cycle', Chr IV from 316388-315357, reverse complement, Verified ORF
PROTEIN	317	YMR226C	1.0000	32	5	1	DTTPLMADDVADLIVYATSR FAVGAFTDSLRK IKPFIENLPQEFK NSGDIVNLGSIAGR VILIAPGLVETEFSLVR	YMR226C	YMR226C SGDID:S000004839,'NADP(+)-dependent dehydrogenase; acts on serine, L-allo-threonine, and other 3-hydroxy acids', Chr XIII from 722395-721592, reverse complement, Uncharacterized ORF
PROTEIN	318	YOL041C	1.0000	16	5	1	AAEADQEEKEASKPDVSDEQTEEVALPK ATLGQEITIEGLR EDELEKAERTVFIGNILSTVITSK SISFDEALPR TVFIGNILSTVITSK	YOL041C	NOP12 SGDID:S000005401,'Nucleolar protein, required for pre-25S rRNA processing; contains an RNA recognition motif (RRM) and has similarity to Nop13p, Nsr1p, and putative orthologs in Drosophila and S. pombe', Chr XV from 252645-251266, reverse complement, Verified ORF
PROTEIN	319	YHR200W	0.9981	4	2	1	NSNPENTVGLISGAGANPR VLSTFTAEFGK	YHR200W	RPN10 SGDID:S000001243,'Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome; N-terminus plays a role in maintaining the structural integrity of the RP; binds selectively to polyubiquitin chains; homolog of the mammalian S5a protein', Chr VIII from 499079-499885, Verified ORF
PROTEIN	320	YEL046C	1.0000	53	6	1	GIPLESPADTNFVFINLK IWNAAAQSGVPLK LAISEAFDYAK MALVNINNDWK SESTEVDVDGNAIR SMGAPIGSVLVGNLK	YEL046C	GLY1 SGDID:S000000772,'Threonine aldolase, catalyzes the cleavage of L-allo-threonine and L-threonine to glycine; involved in glycine biosynthesis', Chr V from 68792-67629, reverse complement, Verified ORF
PROTEIN	321	YGR136W	0.9999	11	2	1	ESNVISGDIFELINSK IGIFPANYVKPAFTR	YGR136W	LSB1 SGDID:S000003368,'Protein containing an N-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization', Chr VII from 762433-763158, Verified ORF
PROTEIN	322	YMR242C	1.0000	137	11	2	ASGEIVSINQINEAHPTK DLKFPLPHR EYQVIGR IFASNEVIAK KASGEIVSINQINEAHPTK KASGEIVSINQINEAHPTKVK LPTESVPEPK NFGVWVR RPSTFY VAAVETLYQDMAAR VKNFGVWVR	YOR312C,YMR242C	RPL20A SGDID:S000004855,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similarity to rat L18a ribosomal protein', Chr XIII from 754196-754178,753741-753224, reverse complement, Verified ORF
PROTEIN	323	YMR145C	1.0000	8	2	1	NYFLFTPLLPSTPVGTIELK VTLVEALPNILNMFDK	YMR145C	NDE1 SGDID:S000004753,'Mitochondrial external NADH dehydrogenase, catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p are involved in providing the cytosolic NADH to the mitochondrial respiratory chain', Chr XIII from 556474-554792, reverse complement, Verified ORF
PROTEIN	324	YDR300C	1.0000	12	3	1	GLHSDQIEEELGYNDSEYVAHR GLPGVNTAGGSGSDVGTGGMETK TNPDAMPILVVPDLSK	YDR300C	PRO1 SGDID:S000002708,'Gamma-glutamyl kinase, catalyzes the first step in proline biosynthesis', Chr IV from 1062787-1061501, reverse complement, Verified ORF
PROTEIN	325	YLR392C	0.9663	12	2	1	IDQEYMFQQNGMMMPGQDNK KISVILKGFSETLTK	YLR392C	YLR392C SGDID:S000004384,'Hypothetical protein', Chr XII from 906305-904749, reverse complement, Uncharacterized ORF
PROTEIN	326	YHR068W	1.0000	31	2	1	EINDESSVLYWAHK LPELLQDAVLK	YHR068W	DYS1 SGDID:S000001110,'Deoxyhypusine synthase, catalyzes formation of deoxyhypusine, the first step in hypusine biosynthesis; triggers posttranslational hypusination of translation elongation factor eIF-5A and regulates its intracellular levels; tetrameric', Chr VIII from 232135-233298, Verified ORF
PROTEIN	327	YPR160W	0.9132	2	1	1	LISETLNDPTEEYLLDMAK	YPR160W	GPH1 SGDID:S000006364,'Non-essential glycogen phosphorylase required for the mobilization of glycogen, activity is regulated by cyclic AMP-mediated phosphorylation, expression is regulated by stress-response elements and by the HOG MAP kinase pathway', Chr XVI from 861302-864010, Verified ORF
PROTEIN	328	YBR026C	0.9979	4	3	1	QPVTLPTSLHIFK TLAFPINPSDINQLQGVYPSRPEK VIPLQANQGTWSNYR	YBR026C	ETR1 SGDID:S000000230,'2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family; localized to in mitochondria, where it has a probable role in fatty acid synthesis', Chr II from 294019-292877, reverse complement, Verified ORF
PROTEIN	329	YMR125W	0.9999	5	2	1	QAAIALLTMVVNSK YLDTSYIPR	YMR125W	STO1 SGDID:S000004732,'Large subunit of the nuclear mRNA cap-binding protein complex, interacts with Npl3p to carry nuclear poly(A)+ mRNA to cytoplasm; also involved in nuclear mRNA degradation and telomere maintenance; orthologous to mammalian CBP80', Chr XIII from 517538-517562,517885-520445, Verified ORF
PROTEIN	330	YGL048C	1.0000	40	7	1	ADPLVSLMMVEK EVIELPVKHPELFESLGIAQPK GVILYGPPGTGK LDILDPALLRPGR LLQEPGSYVGEVIK TMLELLNQLDGFETSK VPDSTYDMVGGLTK	YGL048C	RPT6 SGDID:S000003016,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle', Chr VII from 411289-410072, reverse complement, Verified ORF
PROTEIN	331	YDR341C	1.0000	122	15	1	DSHPDVNIVDLMR EPAAKLLIRLLGQYPDVLR GDLLIPIPR GLTHEDKGAVLIDLTK ISGVDSSLIFPALEWTNTMER LGWEVIR LLGLTPVER LLGQYPDVLR LVIPDILTR MLSFEGDTGPYLQYAHSR MNYLGDWGK QFGLLAVGFER WINADFSLLK WINADFSLLKEPAAK YAQIEHPEEVADLVGISAVMIQDMQGK	YDR341C	YDR341C SGDID:S000002749,'Cytoplasmic arginyl-tRNA synthetase', Chr IV from 1153620-1151797, reverse complement, Verified ORF
PROTEIN	332	YLR452C	0.9999	6	2	1	EYKPAPLTLAETHSPNASVENSHTIVR TMPDILLSSFNSMK	YLR452C	SST2 SGDID:S000004444,'GTPase-activating protein for Gpa1p, regulates desensitization to alpha factor pheromone; also required to prevent receptor-independent signaling of the mating pathway; member of the RGS (regulator of G-protein signaling) family', Chr XII from 1041364-1039268, reverse complement, Verified ORF
PROTEIN	333	YOL109W	1.0000	75	4	1	AETAAQDVQQKLEETKESLQNK EQAEASIDNLKNEATPEAEQVK EQAEASIDNLKNEATPEAEQVKK NEATPEAEQVKKEEQNIADGVEQK	YOL109W	ZEO1 SGDID:S000005469,'Peripheral membrane protein of the plasma membrane that interacts with Mid2p; regulates the cell integrity pathway mediated by Pkc1p and Slt2p', Chr XV from 110297-110638, Verified ORF
PROTEIN	334	YLR179C	1.0000	44	3	1	LALLMTDPDAPSR LGNPMPMEATQAAPTIK VENIISWGYGTPGAGAYDYIK	YLR179C	YLR179C SGDID:S000004169,'Protein of unknown function, transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus; YLR179C is not essential', Chr XII from 514715-514110, reverse complement, Uncharacterized ORF
PROTEIN	335	YDR060W	1.0000	11	7	1	ASNFDSDDEMDENEIWSALVKSR EALALGASEEDLK FMSQILSDGTLNDK ISAVTLLIQDSPLHNTK LEDVDDDDIEEESTSSK RILQVCSHWLNVGTITGFFFLLIQLAKTVPQIK SLKQDALNVERVEAFVK	YDR060W	MAK21 SGDID:S000002467,'Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein', Chr IV from 570646-573723, Verified ORF
PROTEIN	336	YNR021W	1.0000	7	3	1	GNQIFQSLHSFLANDLK PYEVLSQAGNLLK VNSLNAPYQALSYDEQK	YNR021W	YNR021W SGDID:S000005304,'Hypothetical protein', Chr XIV from 668379-669593, Uncharacterized ORF
PROTEIN	337	YBL055C	0.9617	2	2	1	LVVHSFTGSAIDLQK LYHTIGVHPCCVNEFADASQGDK	YBL055C	YBL055C SGDID:S000000151,'Hypothetical protein', Chr II from 116832-115576, reverse complement, Uncharacterized ORF
PROTEIN	338	YMR013C	0.9998	15	5	1	DFECFYSNFVQTVILLGTFFYCVER LKNIISIVINSLLSLILK LKNIISIVINSLLSLILKYIGQLK NIISIVINSLLSLILK NIISIVINSLLSLILKYIGQLK	YMR013C	SEC59 SGDID:S000004615,'Dolichol kinase, catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis; required for viability and for normal rates of lipid intermediate synthesis and protein N-glycosylation', Chr XIII from 296737-295178, reverse complement, Verified ORF
PROTEIN	339	YFL038C	1.0000	19	2	1	MPFLETSALDSTNVEDAFLTMAR MWLQEIDR	YFL038C	YPT1 SGDID:S000001856,'Ras-like small GTPase, involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by protein geranylgeranyltransferase type II (Bet2p-Bet4p)', Chr VI from 55985-55365, reverse complement, Verified ORF
PROTEIN	340	YPL240C	1.0000	767	30	1	AELINNLGTIAK AILFIPK APFDLFESK DDQLEYLEEK DFELEETDEEKAER DSSMSSYMSSK ELISNASDALDK ELISNASDALDKIR GVVDSEDLPLNLSR HFSVEGQLEFR HSEFVAYPIQLVVTK KLIEAFNEIAEDSEQFEK KVKEEVQEIEELNK LFLKDDQLEYLEEK LFLKDDQLEYLEEKR LIEAFNEIAEDSEQFEK LLDAPAAIR LLYETALLTSGFSLDEPTSFASR NIYYITGESLK NPSDITQEEYNAFYK QLETEPDLFIR RAPFDLFESK RAPFDLFESKK SISNDWEDPLYVK SPFLDALK SVDELTSLTDYVTR TGQFGWSANMER TLVDITKDFELEETDEEKAER VFITDEAEDLIPEWLSFVK VKEEVQEIEELNK	YPL240C	HSP82 SGDID:S000006161,'Cytoplasmic chaperone (Hsp90 family) required for pheromone signaling and negative regulation of Hsf1p; docks with the mitochondrial import receptor Tom70p for preprotein delivery; interacts with co-chaperones Cns1p, Cpr6p, Cpr7p, and Sti1p', Chr XVI from 98625-96496, reverse complement, Verified ORF
PROTEIN	341	YJR070C	1.0000	115	9	1	AIEYIAESFVNDK AIEYIAESFVNDKSELLK DATIPELQALLNDPK DATIPELQALLNDPKQPLFQR DIGTDEAILALATGFSAESSLFK DKENLQQSLYSSIDPAPPLPLEK HEAAEALGAIASPEVVDVLK HEAAEALGALGDKDSLDDLNK SYLNDEVDVVR	YJR070C	LIA1 SGDID:S000003831,'Deoxyhypusine hydroxylase, a HEAT-repeat containing metalloenzyme that catalyses hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning', Chr X from 570513-569536, reverse complement, Verified ORF
PROTEIN	342	YDL143W	1.0000	35	9	1	DIEREEIEFLSK GLIAGGGAPEIEISR GLIAGGGAPEIEISRRLSK IGLIQFQISPPKPDTENNIIVNDYR IVRVTGIRNNNAR IVSQYSSFLAPLAVDSVLK LGSADLVEEIDSDGSK SILRDAVNDLALHFLSKLNIMVVK VGGTIDDTEMIDGVVLTQTAIK	YDL143W	CCT4 SGDID:S000002302,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr IV from 199997-201583, Verified ORF
PROTEIN	343	YMR290C	1.0000	22	3	1	MGFTTMTSVQAR SLMFLTPNELGFLR VPLNEYEFPENK	YMR290C	HAS1 SGDID:S000004903,'ATP-dependent RNA helicase; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles', Chr XIII from 851590-850073, reverse complement, Verified ORF
PROTEIN	344	YAL038W	1.0000	1277	34	1	AEVSDVGNAILDGADCVMLSGETAK AGAGHSNTLQVSTV AGLNIVR AIIVLSTSGTTPR EPVSDWTDDVEAR GDLGIEIPAPEVLAVQK GDLGIEIPAPEVLAVQKK GDTYVSIQGFK GVFPFVFEK GVFPFVFEKEPVSDWTDDVEAR GVNLPGTDVDLPALSEK GVNLPGTDVDLPALSEKDKEDLR IENQQGVNNFDEILK IENQQGVNNFDEILKVTDGVMVAR IIYVDDGVLSFQVLEVVDDK IMYVDYK INFGIEK KGDTYVSIQGFK KSEELYPGRPLAIALDTK LTSLNVVAGSDLR LTSLNVVAGSDLRR NGVHMVFASFIR PLAIALDTKGPEIR PTSTTETVAASAVAAVFEQK SEELYPGRPLAIALDTK SEELYPGRPLAIALDTKGPEIR TANDVLTIR TGTTTNDVDYPIPPNHEMIFTTDDK TGTTTNDVDYPIPPNHEMIFTTDDKYAK TNNPETLVALR TNNPETLVALRK TSIIGTIGPK VTDGVMVAR YRPNCPIILVTR	YAL038W	CDC19 SGDID:S000000036,'Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration', Chr I from 71787-73289, Verified ORF
PROTEIN	345	YGR155W	1.0000	333	25	1	AVVAGAGTGGTISGISK DLHLKPVVSVK DNGFDQLPVLTEDGK EIPGAVILDQYNNMMNPEAHYFGTGR EQNDKIQIVGADPFGSILAQPENLNK FVDDEWLK HNVIDLVGNTPLIALK HNVIDLVGNTPLIALKK IQIVGADPFGSILAQPENLNK KNNLWDDDVLAR LELYNPGGSIK LIDVWYK LNNFNDVSSYNENK LSGLVTLSELLR MDLLSYLA NNLWDDDVLAR NSSAVITDGLKPIHIVTK QLEDLNLFDNLR QLISNEGVLVGGSSGSAFTAVVK STLIEPTSGNTGIGLALIGAIK TDITDYKVEGIGYDFVPQVLDR TDITDYKVEGIGYDFVPQVLDRK TPTAAAWDSPESHIGVAK VEGIGYDFVPQVLDR YADVFGNATVK	YGR155W	CYS4 SGDID:S000003387,'Cystathionine beta-synthase, catalyzes the synthesis of cystathionine from serine and homocysteine, the first committed step in cysteine biosynthesis', Chr VII from 798548-800071, Verified ORF
PROTEIN	346	YDL060W	1.0000	8	3	1	LVHIPDFGDFQLNK LVHIPDFGDFQLNKIEK NIELIGHGTFLNADHSR	YDL060W	TSR1 SGDID:S000002218,'Protein required for processing of 20S pre-rRNA in the cytoplasm, associates with pre-40S ribosomal particles', Chr IV from 341619-343985, Verified ORF
PROTEIN	347	YGL195W	1.0000	110	26	1	AAILFALNVLFIK AVDLLLPELER EILPTLTGMIVTHLASSSNVLR ENVIILYGTLAR FAILTLNSFLK FLVDDGGLVDREPIVR GNSIETVTGTTIQLR GYGISALSEFDIIR IGDENINLLINELSK IHAVNLLQELFYK IRLSSVQLTGELLFQVTGISSR KGAAWGIAGLVK KLSKEEQELVNEQLAK LDEMLPTILAGVTNFR LDEMLPTILAGVTNFRAYIR LGSAQALAEVISGLGLTK LIGSLSEILSNDEAHK LINQYFSSFK LIPVAVSNLDEIAWR NIAAQTLGDLVR RVPFLQDISQLVR SLFPLFNQDDSGLR STILETLDNEFELEPFMK TNIVNLVEEEMLGSNDK TPAANLKPFVSVITGPLIR VDPLVIELVTGAK	YGL195W	GCN1 SGDID:S000003163,'Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA', Chr VII from 131531-139549, Verified ORF
PROTEIN	348	YJR105W	1.0000	144	9	1	ENSKPFVLNFSAPFIPHVFK GAAYVLGAGQVVYFGSVGK IVDTNGAGDAFAGGFMAGLTK MAIFDELLQMPETK SLVTDLGAANFFTPDHLDK SLVTDLGAANFFTPDHLDKHWDLVEAAK SMYQVQNDIGTGK TVIFTHGVEPTVVVSSK YSLKENDAILVDAK	YJR105W	ADO1 SGDID:S000003866,'Adenosine kinase, required for the utilization of S-adenosylmethionine (AdoMet); may be involved in recycling adenosine produced through the methyl cycle', Chr X from 623495-624517, Verified ORF
PROTEIN	349	YGR209C	1.0000	45	3	1	AEVSSMPTLIFYK FAEQYSDAAFYK FAEQYSDAAFYKLDVDEVSDVAQK	YGR209C	TRX2 SGDID:S000003441,'Cytoplasmic thioredoxin isoenzyme of the thioredoxin system which protects cells against both oxidative and reductive stress, forms LMA1 complex with Pbi2p, acts as a cofactor for Tsa1p, required for ER-Golgi transport and vacuole inheritance', Chr VII from 913232-912918, reverse complement, Verified ORF
PROTEIN	350	YNL154C	1.0000	12	3	1	DIKPDNFLIGRPGQPDANK LDPTSYEAYQQQTQQK LTNVYDLAQGLPIQFGR	YNL154C	YCK2 SGDID:S000005098,'Palmitoylated, plasma membrane-bound casein kinase I isoform; shares redundant functions with Yck1p in morphogenesis, proper septin assembly, endocytic trafficking; provides an essential function overlapping with that of Yck1p', Chr XIV from 345278-343638, reverse complement, Verified ORF
PROTEIN	351	YBL064C	1.0000	14	3	1	FGQFNEIKPYLR INSDAPNFDADTTVGK LIFTYPSTVGR	YBL064C	PRX1 SGDID:S000000160,'Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity, has a role in reduction of hydroperoxides; induced during respiratory growth and under conditions of oxidative stress', Chr II from 101158-100373, reverse complement, Verified ORF
PROTEIN	352	YKL029C	1.0000	27	10	1	AQMWEPVYRPMIK GLILQSYEANSTPAQHVYAK HNPRPIIFPLSNPTR IEQEQVPGGAPGETVKVPR KVYPSAVLHFEDFGVK LATAVILQALEEGTAR PIIFPLSNPTR SLHDVVENVKPTCLVGCSTQAGAFTQDVVEEMHK VLIYGAGSAGLGIADQIVNHMVTHGVDKEEAR WTNNNALVATGSPFPPVDGYR	YKL029C	MAE1 SGDID:S000001512,'Mitochondrial malic enzyme, catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids', Chr XI from 384368-382359, reverse complement, Verified ORF
PROTEIN	353	YNL039W	0.9376	15	2	1	LIELQNEHK LKERNNDDNEDNEGSEEEPEIDQ	YNL039W	BDP1 SGDID:S000004984,'Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcription of genes encoding tRNAs, 5S rRNA, U6 snRNA, and other small RNAs', Chr XIV from 555049-556833, Verified ORF
PROTEIN	354	YGR187C	0.9635	18	1	1	INLLPYILLPIASAK	YGR187C	HGH1 SGDID:S000003419,'Protein of unknown function with similarity to human HMG1 and HMG2; localizes to the cytoplasm', Chr VII from 871421-870237, reverse complement, Verified ORF
PROTEIN	355	YGL009C	1.0000	188	16	1	AGMIKPDETTFQYTK ALAYMGLEPNTPLK EAEILVVTGDNFGCGSSREHAPWALKDFGIK ELESAAYDHAEPVQPEDAPQDIANDELKDIPVK GLFYEWR GQKLASNIKLAMVVPGSGLVK HLVHEVTSPQAFEGLENAGR IFQEAGFEWR ILDSDGNVLVDHFEIEPFRK LAMVVPGSGLVK LDQQIIIDK QFGVPYFGMSDAR RVDCTLATVDHNIPTESR SDDTPAKPSSSGMKPFLTLEGISAPLDK SIIAPSYGDIFYNNSFK THLMSPAMAAAAGIAGHFVDIR	YGL009C	LEU1 SGDID:S000002977,'Isopropylmalate isomerase, catalyzes the second step in the leucine biosynthesis pathway', Chr VII from 478657-476318, reverse complement, Verified ORF
PROTEIN	356	YIL008W	0.9391	19	1	1	VEFLGGLDAIFGK	YIL008W	URM1 SGDID:S000001270,'Ubiquitin-like protein with only weak sequence similarity to ubiquitin; depends on the E1-like activating enzyme Uba4p; molecular function of the Urm1p pathway is unknown, but it is required for normal growth, particularly at high temperature', Chr IX from 342533-342832, Verified ORF
PROTEIN	357	YDR427W	1.0000	4	3	1	IPILAQHESFLR ITNSFYSTNSQYFK MFNNHEIDTILSTLR	YDR427W	RPN9 SGDID:S000002835,'Non-ATPase regulatory subunit of the 26S proteasome, has similarity to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects', Chr IV from 1322197-1323378, Verified ORF
PROTEIN	358	YJR069C	1.0000	9	4	1	EVQSILTQEVDNNNK GEYHFFQGITR LKEVQSILTQEVDNNNK TIHLINEALDLEELQDTDLNAIALAK	YJR069C	HAM1 SGDID:S000003830,'Protein of unknown function that is involved in DNA repair; mutant is sensitive to the base analog, 6-N-hydroxylaminopurine, while gene disruption does not increase the rate of spontaneous mutagenesis', Chr X from 569314-568721, reverse complement, Verified ORF
PROTEIN	359	YNL061W	0.9840	2	2	1	GVNLQPIGSWTK TEKDFIQIPHLQK	YNL061W	NOP2 SGDID:S000005005,'Probable RNA m(5)C methyltransferase, essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; localized to the nucleolus; constituent of 66S pre-ribosomal particles', Chr XIV from 510541-512397, Verified ORF
PROTEIN	360	YJL138C	1.0000	476	16	2	AIMPIIEGHDVLAQAQSGTGK APQALMLAPTR DAQIVVGTPGRVFDNIQR FDDMELDENLLR FTVSAIYSDLPQQER FYSTQIEELPSDIATLLN GIDVQQVSLVINYDLPANK GVAINFVTNEDVGAMR GVFGYGFEEPSAIQQR ILISTDLLAR KGVAINFVTNEDVGAMR LRNDKFTVSAIYSDLPQQER MFILDEADEMLSSGFK NDKFTVSAIYSDLPQQER TGTFSIAALQR VVYKFDDMELDENLLR	YKR059W,YJL138C	TIF2 SGDID:S000003674,'Translation initiation factor eIF4A, identical to Tif1p; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G', Chr X from 154610-153423, reverse complement, Verified ORF
PROTEIN	361	YLR410W	0.9988	6	4	1	AMQSIAPILEGFSPK LDIGLLTSLPLAK LPPPGIQDDHSEENLTVHDTLQR SEADPEGLSNSNIVNDADNINSISK	YLR410W	VIP1 SGDID:S000004402,'Protein of unknown function probably involved in the function of the cortical actin cytoskeleton; putative ortholog of S. pombe asp1+', Chr XII from 937539-940979, Verified ORF
PROTEIN	362	YBR101C	1.0000	10	5	1	AAALSIIGTAVQNNLDSQNNFMK AIALLTAYLSSVK ESMAVIMNPEVDLETK LLQQLFGGGGPDDPTLMK LLQWSIANSQGDKEAMAR	YBR101C	FES1 SGDID:S000000305,'Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchange factor for BiP (Kar2p) in the endoplasmic reticulum', Chr II from 444687-443815, reverse complement, Verified ORF
PROTEIN	363	YOL004W	0.9226	1	1	1	VTTPMGTTTVNNNISPSGR	YOL004W	SIN3 SGDID:S000005364,'DNA binding subunit of Sin3p-Rpd3p histone deacetylase complex, involved in transcriptional repression of meiosis-specific genes during vegetative growth and silencing; involved in telomere maintenance', Chr XV from 316939-321549, Verified ORF
PROTEIN	364	YJR060W	0.9548	7	1	1	ENINTAINVLSDLLPVR	YJR060W	CBF1 SGDID:S000003821,'Helix-loop-helix protein that binds the motif CACRTG, which is present at several sites including MET gene promoters and centromere DNA element I (CDEI); required for nucleosome positioning at this motif; targets Isw1p to DNA', Chr X from 548674-549729, Verified ORF
PROTEIN	365	YIL124W	0.9993	9	2	1	GLHLEMKPFNVR VINAITGGVATDIADKRPLPETSIYNFPEGR	YIL124W	AYR1 SGDID:S000001386,'NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase found in lipid particles, ER, and mitochondrial outer membrane; involved in phosphatidic acid biosynthesis; required for spore germination; capable of metabolizing steroid hormones', Chr IX from 126204-127097, Verified ORF
PROTEIN	366	YGR234W	1.0000	151	11	1	ALQIKPEHYPIVGEYLLK ATVPVLEQQGTVITR ENFPAGLVSEYLHK EYVASDIVEFTVKPK FGSGIELESLPITPGQYITVNTHPIR IIVHTDTEPLINAAFLK LSAPAGDFAINK MYEEALWPGWKPFDITAK NIDDLSVLMDHVK NMLTEHTELLNIFNR VGAQPNALATTVLAAAK	YGR234W	YHB1 SGDID:S000003466,'Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification; plays a role in the oxidative and nitrosative stress responses', Chr VII from 959908-961107, Verified ORF
PROTEIN	367	YCR004C	1.0000	22	5	1	ADIYRVEETLPDEVLTK FGNLPAQWSAFWDK NSFAELASIEEVHGGSPWGAGTLAGPDGSR TLLEYDAFLFGVPTR VEETLPDEVLTK	YCR004C	YCP4 SGDID:S000000597,'Protein of unknown function, has sequence and structural similarity to flavodoxins; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern', Chr III from 120316-119573, reverse complement, Verified ORF
PROTEIN	368	YPR173C	0.9754	4	2	1	IYIPLPDLAAR STRPTVNEDDLLKQEQFTR	YPR173C	VPS4 SGDID:S000006377,'AAA-type ATPase required for efficient late endosome to vacuole transport; catalyzes the release of an endosomal membrane-associated class E VPS protein complex; cytoplasmic protein that is also associated with an endosomal compartment', Chr XVI from 887833-886520, reverse complement, Verified ORF
PROTEIN	369	YPR137W	0.9880	2	3	1	IAHGILPEPSFNDISGETDEELR LIVWSTESLSPVK VGENNLTCISCFQPVLNK	YPR137W	RRP9 SGDID:S000006341,'Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein', Chr XVI from 802355-804076, Verified ORF
PROTEIN	370	YHR039C-A	0.9679	18	1	1	ILIETVIKPSAEVHINAL	YHR039C-A	VMA10 SGDID:S000002100,'Vacuolar H+ ATPase subunit G of the catalytic (V1) sector, involved in vacuolar acidification', Chr VIII from 187672-187670,187507-187166, reverse complement, Verified ORF
PROTEIN	371	YNL067W	1.0000	20	8	1	FLDGIYVSHK GFIVEDM HIDVTFTK KFLDGIYVSHK SLVDNMITGVTK YIQTEQQIEIPEGVTVSIK YVYAHFPINVNIVEK YVYAHFPINVNIVEKDGAK	YNL067W	RPL9B SGDID:S000005011,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap and has similarity to E. coli L6 and rat L9 ribosomal proteins', Chr XIV from 499682-500257, Verified ORF
PROTEIN	372	YBR025C	1.0000	150	8	1	APQAAGVIHNDLMNTFILAQVMK DLEIINQELR GASAGEGLGNAFLSHIR KVLLGRPGNNLK LSHMSPEDAEEELKK STFFQAITR SVDSIYQVVR TASEVPAHLTVYDIAGLTK	YBR025C	YBR025C SGDID:S000000229,'Hypothetical protein', Chr II from 291865-290681, reverse complement, Uncharacterized ORF
PROTEIN	373	YNL208W	1.0000	11	3	1	GLFSTIVGGSAGAYAGSK LSGVLGAIGGAFLANK TGAPNNGQYGADNGNPNGERGLFSTIVGGSAGAYAGSK	YNL208W	YNL208W SGDID:S000005152,'Hypothetical protein', Chr XIV from 254419-255018, Uncharacterized ORF
PROTEIN	374	YER055C	1.0000	69	4	1	AAGLVDIATVLSTSAYLIESK IDDEGWVAVSSMIER LLFAIPK YFADLEGTTVEK	YER055C	HIS1 SGDID:S000000857,'ATP phosphoribosyltransferase, a hexameric enzyme, catalyzes the first step in histidine biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts; transcription is regulated by general amino acid control', Chr V from 265784-264891, reverse complement, Verified ORF
PROTEIN	375	YJR123W	1.0000	333	5	1	DASLVDYVQVR RVNQAIALLTIGAR TIAETLAEELINAAK VNQAIALLTIGAR WSFEEVEVK	YJR123W	RPS5 SGDID:S000003884,'Protein component of the small (40S) ribosomal subunit, the least basic of the non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; has similarity to E. coli S7 and rat S5 ribosomal proteins', Chr X from 651817-652494, Verified ORF
PROTEIN	376	YJL128C	0.9994	6	3	1	HIQQIVNKPLPPLPVAGSSK LSLSSKGIDFSNGSSSR RPTYAALTEHPWLVK	YJL128C	PBS2 SGDID:S000003664,'MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway, activated under severe osmotic stress', Chr X from 180022-178016, reverse complement, Verified ORF
PROTEIN	377	YJR002W	0.9985	5	3	1	KSQRPQFELSDVK LVLDSIDGDLIQGIQELK TAKPVPVITSEVTESLEDMIR	YJR002W	MPP10 SGDID:S000003762,'Component of the SSU processome, which is required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p', Chr X from 438780-440561, Verified ORF
PROTEIN	378	YER120W	1.0000	51	5	1	AVADVWSDLEAEFK EVPAEPETQPPVQVK SPLTEQSTEYASISNNSDQTIAFK YLISPDVHPAQNQNIQENK YLISPDVHPAQNQNIQENKETVEPVVQDSEPK	YER120W	SCS2 SGDID:S000000922,'Integral ER membrane protein that regulates phospholipid metabolism via an interaction with the FFAT motif of Opi1p, also involved in telomeric silencing, disruption causes inositol auxotrophy above 34 degrees C, VAP homolog', Chr V from 401131-401865, Verified ORF
PROTEIN	379	YGL207W	1.0000	19	10	1	EASDMSVDETGGGR FMDLLSNEMVR FMTEWNPVWEAAVK FNFDLLDWTYSPIIQSGK KVEELPYEESADNQFVR LFDDVIALINSAGK NIGSLIGLEFR RLDQIFVRPNPDTK RVPSTVFIHENGIR YGDEDELEQEQEER	YGL207W	SPT16 SGDID:S000003175,'Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilizing and then reassembling nucleosome structure', Chr VII from 98973-102080, Verified ORF
PROTEIN	380	YPL106C	1.0000	496	22	1	AEEWLYDEGFDSIK DDLTIVAHTFGLDAK DFDLAITEHFADEFK EELEELVKPLLER FEDIHPYSVSYSWDK GIDIVVNEVSNR GKLEEEYAPFASDAEK HVFSATQLAAMFIDK IIGLDYHHPDFEQESK IVNDVTAAGVSYGIFK KDDLTIVAHTFGLDAK KLNELIEKENEMLAQDK KNTLEEYIYTLR LNELIEKENEMLAQDK LSAEEVDFVEIIGGTTR NTLEEYIYTLR QSISEAFGKPLSTTLNQDEAIAK QVEDEDHMEVFPAGSSFPSTK STPSVVGFGPK TVKKDDLTIVAHTFGLDAK VLSANTNAPFSVESVMNDVDVSSQLSR YEELASLGNIIR	YPL106C	SSE1 SGDID:S000006027,'ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded proteins; member of the heat shock protein 70 (HSP70) family; localized to the cytoplasm', Chr XVI from 352272-350191, reverse complement, Verified ORF
PROTEIN	381	YPR191W	1.0000	38	6	1	FIGDSVAAIGIPVNK FVDESLLSTLPAGK GLGNPLLYDGVER KGLGNPLLYDGVER NAVQNESVSSPIELNFDAVK TAFKPHELTESVLPAAR	YPR191W	QCR2 SGDID:S000006395,'Subunit 2 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial inner membrane electron transport chain; transcription is regulated by Hap1p, Hap2p/Hap3p, and heme', Chr XVI from 919377-920483, Verified ORF
PROTEIN	382	YMR241W	0.9905	20	2	1	IGASALGGGLSAWNQPIEVIR SASAGGVPQSSWSVFK	YMR241W	YHM2 SGDID:S000004854,'Mitochondrial DNA-binding protein, component of the mitochondrial nucleoid structure, involved in mtDNA replication and segregation of mitochondrial genomes; member of the mitochondrial carrier protein family', Chr XIII from 751960-752904, Verified ORF
PROTEIN	383	YJL189W	0.9994	44	2	1	KQNRPLPQWIR QNRPLPQWIR	YJL189W	RPL39 SGDID:S000003725,'Protein component of the large (60S) ribosomal subunit, has similarity to rat L39 ribosomal protein; required for ribosome biogenesis; exhibits genetic interactions with SIS1 and PAB1', Chr X from 75932-75937,76324-76473, Verified ORF
PROTEIN	384	SHUFF_YER021W	0.9307	4	2	1	MQYDYK SSYIDIDEECTITTAK	SHUFF_YER021W	RPN3 SGDID:S000000823,'Essential, non-ATPase regulatory subunit of the 26S proteasome lid, similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control', Chr V from 196947-198518, Verified ORF
PROTEIN	385	YML106W	1.0000	35	7	1	DHGEGGIIVGSALENKR EAKDHGEGGIIVGSALENKR ESPYFFNLGLFNTGK FQNIQYAFNR GQVVGSIIALDR GQVVGSIIALDRQEVVSTDDKEGLSATQTVSK SKIEQYLQTYGASA	YML106W	URA5 SGDID:S000004574,'One of two orotate phosphoribosyltransferase isozymes (see also URA10) that catalyze the fifth enzymatic step in de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate', Chr XIII from 56773-57453, Verified ORF
PROTEIN	386	YHR012W	0.9492	11	2	1	MLLLALSDAHIPDR QLDVDILLWGGTHNVEAYTLEGK	YHR012W	VPS29 SGDID:S000001054,'Endosomal protein that is a subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde transport; forms a subcomplex with Vps35p and Vps26p that selects cargo proteins for endosome-to-Golgi retrieval', Chr VIII from 129475-129522,129642-130442, Verified ORF
PROTEIN	387	SHUFF_YNL054W	0.9957	6	3	1	EDQRDISDDENGDNR TSKENDEDSNDSNTRDYASPDPTDK VQPLIFKIKIFNMNNLHR	SHUFF_YNL054W	VAC7 SGDID:S000004999,'Integral vacuolar membrane protein involved in vacuole inheritance and morphology; may function to regulate Fab1p kinase activity', Chr XIV from 526087-529584, Verified ORF
PROTEIN	388	YKL143W	0.9343	3	1	1	GMAKPEYLLHQQDTTDEIR	YKL143W	LTV1 SGDID:S000001626,'Protein required for growth at low temperature', Chr XI from 176786-178177, Verified ORF
PROTEIN	389	YDL081C	1.0000	48	1	1	LLTLTNAANVPVENIWADIFAK	YDL081C	RPP1A SGDID:S000002239,'Ribosomal protein P1 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component', Chr IV from 310122-309802, reverse complement, Verified ORF
PROTEIN	390	YDR390C	0.9988	20	4	1	ETSLVTIIGEDSYK LSSDCLNKMKLSDFVVLIR QIAGNIIPAIATTNAIVAGASSLISLRVLNLLK TAQSASNSVGTIQEQISNFINITQK	YDR390C	UBA2 SGDID:S000002798,'Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugation to proteins (sumoylation), which may play a role in protein targeting; essential for viability', Chr IV from 1256839-1254929, reverse complement, Verified ORF
PROTEIN	391	YER073W	1.0000	32	9	1	AGTVWINTYNNFHQNVPFGGFGQSGIGR ALFNLADLVEK AMEDDVDEAVAAAK GYFVKPTVFADVK IVKEEVFGPIVTVSK IYIQDTVYEEVLQK SPNIVFADADLDK VGDPFDEEVFQGAQTSDK WSIVEPEVR	YER073W	ALD5 SGDID:S000000875,'Mitochondrial aldehyde dehydrogenase, involved in regulation or biosynthesis of electron transport chain components and acetate formation; activated by K+; utilizes NADP+ as the preferred coenzyme; constitutively expressed', Chr V from 304027-305589, Verified ORF
PROTEIN	392	YJR007W	1.0000	37	5	1	AVTATEDAELQALLESK FQIPLEELYK GIEQLESAIEK LSIIDETVWEGIEPPSKDVLDELK LVAAPLYVLTTQALDK	YJR007W	SUI2 SGDID:S000003767,'Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP', Chr X from 450935-451849, Verified ORF
PROTEIN	393	YML125C	0.9877	4	3	1	SSGDDQVFVF TRLESLDIPAGHHVAVR WTGDVGYITK	YML125C	YML125C SGDID:S000004594,'Essential protein required for maturation of Gas1p and Pho8p; GFP-fusion protein localizes to the endoplasmic reticulum; null mutants have a cell separation defect', Chr XIII from 21700-20762, reverse complement, Uncharacterized ORF
PROTEIN	394	YML069W	0.9845	3	1	1	NQGVIQLDGFSQDDYNLIK	YML069W	POB3 SGDID:S000004534,'Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), which facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilizing and then reassembling nucleosome structure', Chr XIII from 135500-137158, Verified ORF
PROTEIN	395	YOL057W	1.0000	8	4	1	DISPVIETNIGFIETYR EYDETPQGMLQSFLDR HPPSFISQEDRPIFEK LLTEFTDGFNFDKENPPLGLDGK	YOL057W	YOL057W SGDID:S000005418,'Putative metalloprotease', Chr XV from 220766-222901, Uncharacterized ORF
PROTEIN	396	YKL145W	1.0000	22	5	1	ESDTGLAPSHLWDIMGDR EVVELPLLSPER KVEFSLPDLEGR VMFATNRPNTLDPALLRPGR VSPTDIEEGMR	YKL145W	RPT1 SGDID:S000001628,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and the E3 ubiquitin-protein ligase Ubr1p', Chr XI from 174218-175621, Verified ORF
PROTEIN	397	YFR030W	0.9160	2	2	1	TSISVSEYIYQPDFIWSPK TVLPLVESVPEASILAK	YFR030W	MET10 SGDID:S000001926,'Subunit alpha of assimilatory sulfite reductase, which is responsible for the conversion of sulfite into sulfide', Chr VI from 213300-216407, Verified ORF
PROTEIN	398	YDL126C	1.0000	247	23	1	AAAPTVVFLDELDSIAK AAAPTVVFLDELDSIAKAR ATQGFSGADLLYIVQR AVATEVSANFISVK EMVELPLR EMVELPLRHPQLFK EVDIGIPDATGR FALGNSNPSALR GPELLSMWYGESESNIR GVLFYGPPGTGK GVLMYGPPGTGK KTPLEPGLELTAIAK LDQLIYVPLPDENAR LSILNAQLR NAPAIIFIDEIDSIAPK NVFVIGATNRPDQIDPAILRPGR SNVVVIAATNRPNSIDPALR SNVVVIAATNRPNSIDPALRR TPLEPGLELTAIAK VEGEDVEMTDEGAK VEGEDVEMTDEGAKAEQEPEVDPVPYITK VVNQLLTEMDGMNAK VVSQLLTLMDGMK	YDL126C	CDC48 SGDID:S000002284,'ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97; in a complex with Npl4p and Ufd1p participates in retrotranslocation of ubiquitinated proteins from the ER into the cytosol for degradation by the proteasome', Chr IV from 238664-236157, reverse complement, Verified ORF
PROTEIN	399	YOR362C	1.0000	32	3	1	GDLLQEAIDFAQK LGQYVQAHTLYNSVRPFGVSTIFGGVDK TPIPIPAFADR	YOR362C	PRE10 SGDID:S000005889,'20S proteasome alpha-type subunit', Chr XV from 1018744-1017878, reverse complement, Verified ORF
PROTEIN	400	YMR276W	1.0000	18	4	1	ILKDDQTVESYHIQDGHSVHLVK QLNDMGFFDFDR QMLQSPMFR SGQDKWEVNVAPESTVLQFK	YMR276W	DSK2 SGDID:S000004889,'Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle, involved in proteolysis, interacts with the proteasome', Chr XIII from 818826-819947, Verified ORF
PROTEIN	401	YOR217W	0.9341	2	2	1	NIALKPFDIAHK SSDSASNITAQDVLDKIPSLDLSNVHVK	YOR217W	RFC1 SGDID:S000005743,'Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon', Chr XV from 749302-751887, Verified ORF
PROTEIN	402	YGR061C	1.0000	137	25	1	CQQVIDACVALGNNNPIQSIHDVGAGGLSNALPELVHDNDLGAK DINSYTNSTSVINELR ETITEALNLPEANLSEIPSLQDAIQR EYISIVGKPSFQSQEIK FHLDDFIGLAACGGFSYGDVLGAGAGWAK GFHKPIMIAGGFGTVRPQFALK IFNADWTIDGIK IINSTTNDVIYANSR LIVEDPLLK LSANWMSPASHQGEGSK LSVAESLLNIFAADVK LYEAVQALGLDLCPALGVAIPVGK MTQQLYLTEPPNTMSIFTHEEPKPLVHVPLTPK QLNDAVANNLPSSALGEDTYLIR QQFTLFQMIR SELEQTWSKTSYEMQKLR SFLITIGDR SLGASALLQVYNQVGNK SPTVYDNAILK TAEEEFASITDDRDPGLQYALTYNPADDMK TTPIDLEMPILFGKPPK TVPGFPLLENLNDISLK VETHNHPTAVSPFPGAATGSGGEIR VETHNHPTAVSPFPGAATGSGGEIRDEGATGR YEEWGGYGPWIR	YGR061C	ADE6 SGDID:S000003293,'Formylglycinamidine-ribonucleotide (FGAM)-synthetase, catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway', Chr VII from 615969-611893, reverse complement, Verified ORF
PROTEIN	403	YML124C	1.0000	9	3	1	AIYVDLEPNVIDEVR IGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWK IHFPLVSYAPILSK	YML124C	TUB3 SGDID:S000004593,'Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p', Chr XIII from 23684-23660,23361-22049, reverse complement, Verified ORF
PROTEIN	404	YDL178W	0.9981	2	2	1	IAVVPQGGNTGLVGGSVPIFDELILSLANLNKIR LSEAELVGDSPKPVVGAIGYGHVGDGNLHLNVAVR	YDL178W	DLD2 SGDID:S000002337,'D-lactate dehydrogenase, located in the mitochondrial matrix', Chr IV from 139523-141115, Verified ORF
PROTEIN	405	YGR027C	0.9918	26	1	2	YVSVSVLVDR	YLR333C,YGR027C	RPS25A SGDID:S000003259,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps25Bp and has similarity to rat S25 ribosomal protein', Chr VII from 534462-534136, reverse complement, Verified ORF
PROTEIN	406	YEL031W	1.0000	20	5	1	FLWHENEQVFSSPK KPADLASLLLNSAGDAQGDEAPALK LANVSAVTNIIR SASIASHNDALFAAVK WNQPQPPVPEPIAHLFPPGPK	YEL031W	SPF1 SGDID:S000000757,'P-type ATPase, ion transporter of the ER membrane involved in ER function and Ca2+ homeostasis; required for regulating Hmg2p degradation; confers sensitivity to a killer toxin (SMKT) produced by Pichia farinosa KK1', Chr V from 90258-93905, Verified ORF
PROTEIN	407	YKL191W	0.9600	3	2	1	ALTHLELEAADDDDSKQLTTR HYLFVVGKPNVAK	YKL191W	DPH2 SGDID:S000001674,'Protein required, along with Dph1p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide, which is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); may act in a complex with Dph1p and Kti11p', Chr XI from 81040-82644, Verified ORF
PROTEIN	408	YDR144C	1.0000	9	4	1	HGTILFGAVDHGK IPVLLDSGTTISYMPTELVK VTVLVDTGSSDLWVTGSDNPYCSTKK YAGDLYTIPIINTLQHR	YDR144C	MKC7 SGDID:S000002551,'GPI-anchored aspartyl protease (yapsin) involved in protein processing; shares functions with Yap3p and Kex2p', Chr IV from 746098-744308, reverse complement, Verified ORF
PROTEIN	409	YIL094C	1.0000	23	7	1	ASTQQVVDDVLSR ASTQQVVDDVLSRL EMGLFANVRPVK KSLTIGLIPGDGIGK SLTIGLIPGDGIGK VEGYSSPIVALR YNEQIVDSMVYR	YIL094C	LYS12 SGDID:S000001356,'Homo-isocitrate dehydrogenase, an NAD-linked mitochondrial enzyme required for the fourth step in the biosynthesis of lysine, in which homo-isocitrate is oxidatively decarboxylated to alpha-ketoadipate', Chr IX from 187629-186514, reverse complement, Verified ORF
PROTEIN	410	YIL002W-A	0.9991	15	1	1	DILDVLNLLK	YIL002W-A	YIL002W-A SGDID:S000028835,'Identified by expression profiling and mass spectrometry', Chr IX from 350298-350507, Uncharacterized ORF
PROTEIN	411	SHUFF_YDL237W	0.9350	1	1	1	YSFVLHDDVMAPDSEHNSAYYHNESYDDR	SHUFF_YDL237W	YDL237W SGDID:S000002396,'Hypothetical protein', Chr IV from 30657-31829, Uncharacterized ORF
PROTEIN	412	YAL049C	1.0000	9	1	1	KPILISAAEEDHIFPANLR	YAL049C	YAL049C SGDID:S000000047,'Hypothetical protein', Chr I from 52596-51856, reverse complement, Uncharacterized ORF
PROTEIN	413	YDR001C	0.9281	1	1	1	LINTQFWNSLTR	YDR001C	NTH1 SGDID:S000002408,'Neutral trehalase, degrades trehalose; required for thermotolerance and may mediate resistance to other cellular stresses; may be phosphorylated by Cdc28p', Chr IV from 452472-450217, reverse complement, Verified ORF
PROTEIN	414	YNL010W	1.0000	12	5	1	IDIVSNEVEIDAHDQWK IIYKDESPFGHDK KQNVPFHEFDTFK QNVPFHEFDTFKDILASMK VFEGVLDDTK	YNL010W	YNL010W SGDID:S000004955,'Hypothetical protein', Chr XIV from 613636-614361, Uncharacterized ORF
PROTEIN	415	YNL079C	1.0000	66	7	1	ELDEIAASLENL KELDEIAASLENL LEAESWQEKYEELKEK NQQLEDEIEKLEAGLSDSK NQQLEEDLEESDTKLK RVAALEEQREEWER VAALEEQREEWER	YNL079C	TPM1 SGDID:S000005023,'Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently', Chr XIV from 479166-478567, reverse complement, Verified ORF
PROTEIN	416	YHR104W	0.9953	3	3	1	EVGEGIRKAISEGLVSR GHITEAHVPIIDTYR SIGVSNFQGSLIQDLLR	YHR104W	GRE3 SGDID:S000001146,'Aldose reductase involved in methylglyoxal, d-xylose and arabinose metabolism; stress induced (osmotic, ionic, oxidative, heat shock, starvation and heavy metals); regulated by the HOG pathway', Chr VIII from 323412-324395, Verified ORF
PROTEIN	417	YLL008W	0.9999	11	3	1	DHLKPALLFNLIR GLASLGYVKPSPIQSATIPIALLGK TAAFMIPIIER	YLL008W	DRS1 SGDID:S000003931,'Nucleolar DEAD-box protein required for ribosome assembly and function, including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles', Chr XII from 131728-133986, Verified ORF
PROTEIN	418	YPL111W	0.9913	3	2	1	DSTTGGSSVMIDGVK ELSIVLAPFSGGQGK	YPL111W	CAR1 SGDID:S000006032,'Arginase, responsible for arginine degradation, expression responds to both induction by arginine and nitrogen catabolite repression; disruption enhances freeze tolerance', Chr XVI from 339943-340944, Verified ORF
PROTEIN	419	YER043C	1.0000	240	10	1	EIELAEHEMPGLMAIR FHLGNLGVR IADISLAAFGR KEIELAEHEMPGLMAIR KLNLILDDGGDLTTLVHEK LKVPAINVNDSVTK LNLILDDGGDLTTLVHEK TGPFEVGVHVLPK VAVVAGYGDVGK VQSEYLGIPEEGPFK	YER043C	SAH1 SGDID:S000000845,'S-adenosyl-L-homocysteine hydrolase, catabolizes S-adenosyl-L-homocysteine which is formed after donation of the activated methyl group of S-adenosyl-L-methionine (AdoMet) to an acceptor', Chr V from 237118-235769, reverse complement, Verified ORF
PROTEIN	420	YGR253C	0.9999	6	3	1	AIGSGSEGAQAELLNEWHSSLTLK EAAESPEEADVEMS GVSTFSPEGR	YGR253C	PUP2 SGDID:S000003485,'Alpha subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is subunit zeta', Chr VII from 999145-998363, reverse complement, Verified ORF
PROTEIN	421	YDR055W	0.9990	5	2	1	LITLPAISSFTSNIK LNTIGQTFSIVSNDYLK	YDR055W	PST1 SGDID:S000002462,'Cell wall protein that contains a putative GPI-attachment site; secreted by regenerating protoplasts; up-regulated by activation of the cell integrity pathway, as mediated by Rlm1p; upregulated by cell wall damage via disruption of FKS1', Chr IV from 563525-564859, Verified ORF
PROTEIN	422	YMR027W	0.9993	21	3	1	ALDLFAGEMEK QEIIDRVPLRPFTEEEIK WPIIIQNAIDDLSK	YMR027W	YMR027W SGDID:S000004629,'High level expression reduced Ty3 Transposition', Chr XIII from 325876-327288, Uncharacterized ORF
PROTEIN	423	YGR135W	0.9998	16	3	1	IFKPQEIKDILVK LYQVEYALESISHAGTAIGIMASDGIVLAAERK TTDSSALTYDRLEFATIR	YGR135W	PRE9 SGDID:S000003367,'20S proteasome beta-type subunit; the only nonessential 20S subunit', Chr VII from 761397-762173, Verified ORF
PROTEIN	424	YBR011C	1.0000	324	14	1	ALGIMALLDEGETDWK AVGDNDPIDVLEIGETIAYTGQVK EETLNPIIQDTK GIDLTNVTLPDTPTYSK IPDGKPENQFAFSGEAK IYKIPDGKPENQFAFSGEAK LEITKEETLNPIIQDTK LEITKEETLNPIIQDTKK LNDIEDVEKYFPGLLR SIDKWFFISGSV VIAIDINDPLAPK WFFISGSV YALDIIKETHDSWK YFPGLLR	YBR011C	IPP1 SGDID:S000000215,'Cytoplasmic inorganic pyrophosphatase (PPase), catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase', Chr II from 257973-257110, reverse complement, Verified ORF
PROTEIN	425	SHUFF_YGL232W	0.9737	6	2	1	KELIKAFIVFLK YTCESAQMQMLSCTENR	SHUFF_YGL232W	TAN1 SGDID:S000003201,'Putative tRNA acetyltransferase, RNA-binding protein required for the formation of the modified nucleoside N(4)-acetylcytidine in serine and leucine tRNAs but not required for the same modification in 18S rRNA', Chr VII from 62075-62131,62190-63002, Verified ORF
PROTEIN	426	YDL051W	0.9984	8	3	1	NDGWVPISTIATFNR SYSNDDESNEILSYEGK SYSNDDESNEILSYEGKK	YDL051W	LHP1 SGDID:S000002209,'RNA binding protein required for maturation of tRNA and snRNA precursors; acts as a molecular chaperone for RNAs transcribed by polymerase III; homologous to human La (SS-B) autoantigen', Chr IV from 363952-364779, Verified ORF
PROTEIN	427	YJL217W	0.9405	9	1	1	VTFSEWSLTAPLGK	YJL217W	YJL217W SGDID:S000003753,'Cytoplasmic protein of unknown function; expression induced by calcium shortage and via the copper sensing transciption factor Mac1p during conditons of copper deficiency; mRNA is cell cycle regulated, peaking in G1 phase', Chr X from 23133-23729, Uncharacterized ORF
PROTEIN	428	YLR397C	0.9986	4	3	1	KYNLPEPLSYAAVGGLDKEIESLK VVATLLTLMDGMGAAGK VVVIAATNRPNSVDPALR	YLR397C	AFG2 SGDID:S000004389,'ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; may be involved in degradation of aberrant mRNAs', Chr XII from 914892-912550, reverse complement, Verified ORF
PROTEIN	429	YOR204W	1.0000	142	13	1	AGNTGLATAFFNSENSNIVK AYPTAVIMAPTR DVPEPITEFTSPPLDGLLLENIK ELATQIFDEAK GLDIPNVTHVINYDLPSDVDDYVHR GLHEILTEANQEVPSFLK KAYPTAVIMAPTR MADQLTDFLIMQNFR MLDMGFEPQIR QTLMFSATFPADIQHLAR SGAATLLVATAVAAR TGGFLFPVLSESFK TGPSPQPESQGSFYQR	YOR204W	DED1 SGDID:S000005730,'ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all yeast mRNAs; mutations in human DEAD-box DBY are a frequent cause of male infertility', Chr XV from 722912-724726, Verified ORF
PROTEIN	430	YOL059W	1.0000	45	6	1	GADILVFNIPHQFLPNIVK IGDENLTDIINTR MWVFDEK VIAENTELHSHIFEPEVR VTVIGSGNWGTTIAK YLPNIDLPHNLVADPDLLHSIK	YOL059W	GPD2 SGDID:S000005420,'NAD-dependent glycerol 3-phosphate dehydrogenase, homolog of Gpd1p, expression is controlled by an oxygen-independent signaling pathway required to regulate metabolism under anoxic conditions; located in cytosol and mitochondria', Chr XV from 217126-218448, Verified ORF
PROTEIN	431	YHL036W	0.9845	1	1	1	LFGPRVGGKFIAFSIAISAASNILVVIYSISR	YHL036W	MUP3 SGDID:S000001028,'Low affinity methionine permease, similar to Mup1p', Chr VIII from 26239-27879, Verified ORF
PROTEIN	432	YJR088C	0.9694	2	1	1	AYTQFNPEQLLQLENEMK	YJR088C	YJR088C SGDID:S000003848,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum', Chr X from 587288-586410, reverse complement, Uncharacterized ORF
PROTEIN	433	YHR020W	1.0000	185	21	1	AFGDYNDNYTPGWK AGSSELEEPIAIRPTSETVMYPYYAK AGTAAAAAAAALEDAK AIGVQNAYFPMFVSSR ALDFPGWYQQILTK EFLWQEGHTAHLTAK EKDHVEGFAPEVAWVTR FLNNFEDSQK IFAYQNSWGLSTR IPEILEEMQGDLFK IPEILEEMQGDLFKK KYVVSFDELEAR MFNLSVENPLGSDHPK PTSETVMYPYYAKWVQSYR SATPVPIVVVALQSTTTPSALIANATSSK SATPVPIVVVALQSTTTPSALIANATSSKDPR VIVNEWSGFVPALNK VIVNEWSGFVPALNKK VSQFQSVVIPVGITK VVDFSQEVSK YVVSFDELEAR	YHR020W	YHR020W SGDID:S000001062,'Putative protein of unknown function, has similarity to proline-tRNA ligase; YHR020W is an essential gene', Chr VIII from 143989-146055, Uncharacterized ORF
PROTEIN	434	YMR235C	1.0000	20	4	1	LDLSGNTIGTEASEALAK LTTSDDIKPYLEELAALK NLEILDLQDNTFTK TIELLEDYIAHAVNIK	YMR235C	RNA1 SGDID:S000004848,'GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport', Chr XIII from 742734-741511, reverse complement, Verified ORF
PROTEIN	435	YGL099W	1.0000	28	7	1	DEGGNGDIPTAQELLVAYAR EQVQNAAKAKGIDIVDLAR GIDIVDLAR ILSIDQLEELFLSK MDSGNDSATSQGFSMTNEQR QAALYNAAEDLDRDFFK SVTQESALDEFLSTAALADKDFTADR	YGL099W	LSG1 SGDID:S000003067,'Putative GTPase involved in 60S ribosomal subunit biogenesis; required for the release of Nmd3p from 60S subunits in the cytoplasm', Chr VII from 314634-316556, Verified ORF
PROTEIN	436	YBL050W	1.0000	16	6	1	ALDGQYIEASDIYSK FELGEILENDLHDYAK GLCQLAATDAVAAAR GVPSSGFMK IKESIQQQEDDLL SGGNSVNAVDSLENAIQIFTHR	YBL050W	SEC17 SGDID:S000000146,'Peripheral membrane protein required for vesicular transport between ER and Golgi and for the 'priming' step in homotypic vacuole fusion, part of the cis-SNARE complex; has similarity to alpha-SNAP', Chr II from 125128-125157,125274-126122, Verified ORF
PROTEIN	437	YML086C	0.9994	3	3	1	DTDYDDFEMR EQDPDNVFLANK TNTSPGPVYGNVCRPFLDNTPSHCR	YML086C	ALO1 SGDID:S000004551,'D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid, which is protective against oxidative stress', Chr XIII from 97371-95791, reverse complement, Verified ORF
PROTEIN	438	YOR122C	1.0000	9	2	1	IVEQLADYLIGVQY QTVIIAHYPPTVQAGEATK	YOR122C	PFY1 SGDID:S000005648,'Profilin, actin- and phosphatidylinositol 4,5-bisphosphate-binding protein, plays a role in cytoskeleton organization, required for normal timing of actin polymerization in response to thermal stress; localizes to plasma membrane and cytosol', Chr XV from 552888-552876,552666-552299, reverse complement, Verified ORF
PROTEIN	439	YDR342C	0.9999	20	1	2	VAVDDPSVLAEVEAVLAGVEAEK	YDR343C,YDR342C	HXT7 SGDID:S000002750,'High-affinity glucose transporter of the major facilitator superfamily, nearly identical to Hxt6p, expressed at high basal levels relative to other HXTs, expression repressed by high glucose levels', Chr IV from 1155922-1154210, reverse complement, Verified ORF
PROTEIN	440	YBR118W	1.0000	1129	23	2	EHALLAFTLGVR FDELLEK FQEIVK FQEIVKETSNFIK FQEIVKETSNFIKK FVPSKPMCVEAFSEYPPLGR IGGIGTVPVGR LPLQDVYK PGMVVTFAPAGVTTEVK PLRLPLQDVYK PTDKPLRLPLQDVYK QTVAVGVIK SGDAALVK SHINVVVIGHVDSGK SVEMHHEQLEQGVPGDNVGFNVK TLLEAIDAIEQPSRPTDK TLLEAIDAIEQPSRPTDKPLR TVPFVPISGWNGDNMIEATTNAPWYK VETGVIKPGMVVTFAPAGVTTEVK YAWVLDK YAWVLDKLK YQVTVIDAPGHR YQVTVIDAPGHRDFIK	YBR118W,YPR080W	TEF2 SGDID:S000000322,'Translational elongation factor EF-1 alpha; also encoded by TEF1; functions in the binding reaction of aminoacyl-tRNA (AA-tRNA) to ribosomes', Chr II from 477665-479041, Verified ORF
PROTEIN	441	YDR471W	1.0000	221	6	2	NQWFFSK SHPFGHALVAGIER SVVSTETFEQPSQR SVVSTETFEQPSQREEAK VVNYNHLLPTR YTLDVEAFK	YHR010W,YDR471W	RPL27B SGDID:S000002879,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Ap and has similarity to rat L27 ribosomal protein', Chr IV from 1401762-1401792,1402177-1402556, Verified ORF
PROTEIN	442	YFL044C	0.9694	3	2	1	MESWGGAIEIGIISDALAVAIYVVDIDAVK NQPESDDVLTAALQLASNLK	YFL044C	OTU1 SGDID:S000001850,'Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p; may contribute to regulation of protein degradation by deubiquitylating substrates that have been ubiquitylated by Ufd2p; member of the Ovarian Tumor (OTU) family', Chr VI from 45560-44655, reverse complement, Verified ORF
PROTEIN	443	YHR039C	1.0000	4	3	1	HITFIGSQPVAHYILK LIGITTLVASIFTLYVLVKIISTPAK SQPQIIQDNQKLIGITTLVASIFTLYVLVK	YHR039C	MSC7 SGDID:S000001081,'Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; msc7 mutants are defective in directing meiotic recombination events to homologous chromatids', Chr VIII from 186802-184868, reverse complement, Verified ORF
PROTEIN	444	YGR267C	1.0000	13	2	1	HETPLNIRPTSPYTLNPPVER TILTELGEDVNR	YGR267C	FOL2 SGDID:S000003499,'GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway', Chr VII from 1025741-1025010, reverse complement, Verified ORF
PROTEIN	445	YGR185C	1.0000	56	9	1	AHLMNPMVPGLAQGGK FVVGSSYQLTPDYTMDIFR IFVLAEENLPSLGYK IGVADAINELLEPIR IGVADAINELLEPIRQEFANNK KIFVLAEENLPSLGYK NLQEVLNPQIIK NLQEVLNPQIIKDVLEVQK NLQEVLNPQIIKDVLEVQKR	YGR185C	TYS1 SGDID:S000003417,'Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase that aminoacylates tRNA(Tyr), required for cytoplasmic protein synthesis, interacts with positions 34 and 35 of the anticodon of tRNATyr', Chr VII from 867525-866341, reverse complement, Verified ORF
PROTEIN	446	YKR018C	0.9994	3	5	1	ALFPNSALWLLNEAR ALFPNSALWLLNEARMLSGK AQGYADDYELSTR ILEDALLQSR NLPLDR	YKR018C	YKR018C SGDID:S000001726,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus', Chr XI from 475543-473366, reverse complement, Uncharacterized ORF
PROTEIN	447	YFL004W	1.0000	24	6	1	FPYSVMEIK HGQWLNDLTNSHLVK LANEVYPPWK LEEDFSEIQNFIIK SSLDSSMSASSMISNVK WTGQLSDKPDIFLEK	YFL004W	VTC2 SGDID:S000001890,'Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in protein localization and non-autophagic vacuolar fusion', Chr VI from 131805-134291, Verified ORF
PROTEIN	448	YNL290W	0.9377	1	1	1	GLALIDLIEGIVK	YNL290W	RFC3 SGDID:S000005234,'Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon', Chr XIV from 86218-87240, Verified ORF
PROTEIN	449	YML008C	1.0000	76	12	1	EVTAALENAAVGLVAGGK FYKGESFAASIAR IAYEIELGDGIPK KIAYEIELGDGIPK KYNLSDQMDFVK LEGVYSEIYK LFTPMMLFVAR MDFEENTFDK PGGTFAVYEWVMTDKYDENNPEHR QFTTAMVTVMEK YNLSDQMDFVK YVQNLANLATFFR	YML008C	ERG6 SGDID:S000004467,'Delta(24)-sterol C-methyltransferase, converts zymosterol to fecosterol in the ergosterol biosynthetic pathway by methylating position C-24; localized to both lipid particles and mitochondrial outer membrane', Chr XIII from 252990-251839, reverse complement, Verified ORF
PROTEIN	450	YLR206W	1.0000	5	3	1	RQEEAQLQQQQAQLLQQQAQFQQQQPLK SYDSVDFFEIMDMLDKR TPSIDTLDDLAQR	YLR206W	ENT2 SGDID:S000004196,'Epsin-like protein required for endocytosis and actin patch assembly and functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus', Chr XII from 554580-556421, Verified ORF
PROTEIN	451	YBR248C	1.0000	22	5	1	AGLNVIENFLK GEFTVNDVKEYLLEHGLK IPALEVASLYFR IPVIASSGAGVPEHFEEAFLK YGSEEFIAAVNK	YBR248C	HIS7 SGDID:S000000452,'Imidazole glycerol phosphate synthase (glutamine amidotransferase:cyclase), catalyzes the fifth and sixth steps of histidine biosynthesis and also produces 5-aminoimidazole-4-carboxamide ribotide (AICAR), a purine precursor', Chr II from 716460-714802, reverse complement, Verified ORF
PROTEIN	452	YGR180C	1.0000	117	8	1	EAEKDEILLMENSR EINFDDDF IMPGLAMANR RFVMFPIK TYIGNLLALSISSDNLVNK WISNDDSLYAER YLIENFSAQLQNPEGK YYNAVNPFEFMEDVATAGK	YGR180C	RNR4 SGDID:S000003412,'Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits', Chr VII from 856306-855269, reverse complement, Verified ORF
PROTEIN	453	SHUFF_YGL206C	0.9872	3	3	1	LIRNDNSAFVSNFR QEEAFDPPTAEVFTEASIDLVDDNLEWEDYNNQR SLSLEDRVLLTASLDTMDIIGYK	SHUFF_YGL206C	CHC1 SGDID:S000003174,'Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; two heavy chains form the clathrin triskelion structural component; the light chain (CLC1) is thought to regulate function', Chr VII from 107508-102547, reverse complement, Verified ORF
PROTEIN	454	YLL055W	0.9845	1	1	1	DSPRFLPAWIVQIVLSFSLAPAILLLIHFILK	YLL055W	YLL055W SGDID:S000003978,'Putative protein of unknown function with similarity to transporters; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YLL055W is not an essential gene', Chr XII from 30109-31704, Uncharacterized ORF
PROTEIN	455	YGR193C	1.0000	13	4	1	DEGSKDVDVGEPIAYIADVDDDLATIK EAYQFSHGTPLMDTNSK FSYDLMQIPK LDLSNIKPIQLKPK	YGR193C	PDX1 SGDID:S000003425,'Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP) of the mitochondrial pyruvate dehydrogenase (PDH) complex, plays a structural role in the complex by binding and positioning E3 to the dihydrolipoamide acetyltransferase (E2) core', Chr VII from 885746-884514, reverse complement, Verified ORF
PROTEIN	456	YMR260C	1.0000	42	2	1	ELIYKEEGQEYAQITK NQGELPENAK	YMR260C	TIF11 SGDID:S000004873,'Translation initiation factor eIF1A, essential protein that forms a complex with Sui1p (eIF1) and the 40S ribosomal subunit and scans for the start codon; C-terminus associates with Fun12p (eIF5B); N terminus interacts with eIF2 and eIF3', Chr XIII from 789838-789377, reverse complement, Verified ORF
PROTEIN	457	YJR015W	0.9940	2	3	1	MGRNYGILVALIALNTALLPFVGKYASR NDIHDLSSVVGDAVSQGVPDMDGQTTDSSK NDIHDLSSVVGDAVSQGVPDMDGQTTDSSKDPEPNSEDK	YJR015W	YJR015W SGDID:S000003776,'Putative protein of unknown function; localizes to the endoplasmic reticulum and cytoplasm; predicted to encode a membrane transporter based on phylogenetic analysis; YJR015W is a non-essential gene', Chr X from 462636-464168, Uncharacterized ORF
PROTEIN	458	YML072C	1.0000	28	12	1	AGDNDDLGQASLDVSSLEVGK ASPEANLVLGAISHQR DKDLGIAQINLGDPQIQQDGQISVK DKNGQVPPVPEVPQEYTQ DSDDVISETSYSTLK EAIGVLAVTIASADSLK FIGSVQIPTSNVFK IASGAAHATVGIAGTGIGAATGVATGGLKK LQGSFNPEYIKPSFDIVK LSLNELIK TNQLPGPNPQGSIGAVPLEGLRPK YLLLNTLEQK	YML072C	TCB3 SGDID:S000004537,'Contains three calcium and lipid binding domains; localized to the bud; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; mRNA is targeted to the bud via the mRNA transport system involving She2p; C-terminal portion of Tcb1p, Tcb2p and Tcb3p interact', Chr XIII from 129367-124730, reverse complement, Verified ORF
PROTEIN	459	YBR283C	1.0000	18	3	1	ATTPNVNDPIYFLR LIDIVKPILPILPEVELPFEK VGEDDQTEAQGALINLIQGLR	YBR283C	SSH1 SGDID:S000000487,'Subunit of the Ssh1 translocon complex; Sec61p homolog involved in co-translational pathway of protein translocation; not essential', Chr II from 770411-768939, reverse complement, Verified ORF
PROTEIN	460	YDR450W	1.0000	202	7	2	AGELTQEELER HFWGLR IPAWFLNR IVQIMQNPTHYK IVYALTTIK LLNTNVDGNIK QNDITDGKDYHTLANNVESK	YDR450W,YML026C	RPS18A SGDID:S000002858,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Bp and has similarity to E. coli S13 and rat S18 ribosomal proteins', Chr IV from 1359915-1359961,1360397-1360790, Verified ORF
PROTEIN	461	YDR513W	0.9917	20	2	1	ATLSTLFQELNVPK LAEILKPVFQ	YDR513W	GRX2 SGDID:S000002921,'Cytoplasmic glutaredoxin, thioltransferase, glutathione-dependent disulfide oxidoreductase involved in maintaining redox state of target proteins, also exhibits glutathione peroxidase activity, expression induced in response to stress', Chr IV from 1471009-1471440, Verified ORF
PROTEIN	462	YPR069C	1.0000	106	10	1	EISDTMWPGQAMTLK EYFQLLNSALTEK EYLPEMAASYSHPK GVITTQAESMWIHLPIIK IHEASFVLPTWAAK KIHEASFVLPTWAAK SKYQDVLIFK SKYQDVLIFKSTTYGNVLVLDNVIQATER THIGDGFQFLR VLVIGGGDGGVLR	YPR069C	SPE3 SGDID:S000006273,'Spermidine synthase, involved in biosynthesis of spermidine and also in biosynthesis of pantothenic acid; spermidine is required for growth of wild-type cells', Chr XVI from 685434-684553, reverse complement, Verified ORF
PROTEIN	463	YNL064C	1.0000	140	10	1	DIKHEISASLEELYK EASAAYEILSDPEKR FKEASAAYEILSDPEKR FYDILGVPVTATDVEIK FYDILGVPVTATDVEIKK HEISASLEELYK KILEVHVEPGMK LEEILPPRIVPAIPKK VGIVPGEVIAPGMR YGGYGNLIIK	YNL064C	YDJ1 SGDID:S000005008,'Protein chaperone involved in regulation of the HSP90 and HSP70 functions; involved in protein translocation across membranes; member of the DnaJ family', Chr XIV from 507098-505869, reverse complement, Verified ORF
PROTEIN	464	YAL036C	1.0000	4	2	1	ELLTSASSGSGGGAGIGFDVAR IQMLDLPGIIDGAK	YAL036C	RBG1 SGDID:S000000034,'Member of the DRG family of GTP-binding proteins; interacts with translating ribosomes', Chr I from 76153-75044, reverse complement, Verified ORF
PROTEIN	465	YMR002W	0.9999	7	1	1	SASTMAAPVHPQQQQQPNAYSHPPAAGAQTR	YMR002W	YMR002W SGDID:S000004604,'Hypothetical protein', Chr XIII from 272193-272663, Uncharacterized ORF
PROTEIN	466	YBL068W	0.9940	2	2	1	EVIAIVTHGIFSGSAR VAALADKLDLNFALIHK	YBL068W	PRS4 SGDID:S000000164,'5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, involved in nucleotide, histidine, and tryptophan biosynthesis; one of a five related enzymes, which are active as heteromultimeric complexes', Chr II from 92412-93395, Verified ORF
PROTEIN	467	YOR239W	1.0000	17	6	1	ALTQDVKEETLENIAHEGR DYGAYDLTQVR GENADINVNDFQEYK NDESEEESANNASEPAEEYSQSEEDADIEQSNGK PETNEEDEEEGSMSENK TAEKPLETNLPKPETNEEDEEEGSMSENK	YOR239W	ABP140 SGDID:S000005765,'Nonessential protein that binds actin filaments and localizes to actin patches and cables, has similarity to S-adenosylmethionine (AdoMet)-dependent methyltransferases', Chr XV from 784858-785688,785690-786745, Verified ORF
PROTEIN	468	YHR064C	1.0000	342	16	1	AELDPLDIDAVLLTGGVSFTPK AIPSALSYVGEDEYHGGQALQQLIR DFIGLPFDK DVNVVVADFGGIR EAVLTVPTNFSEEQK GDFLIGVYEGDHHIEEK GEFHPVLLAETSFPVQK LAAEDYIGSAVK LISDYDADELAEALQPVIVNTPHLK LMELGIKNANGVEIIFNINKDGALR LTTNLEYTLPESVEILGPQNK LTVDEVVSR NASNNPNELAASGAALQAR NDVDVIANPDGER TLEPIPKEENAEEDDESEWSDDEPEVVR VFAQFSSFVDSVIAK	YHR064C	SSZ1 SGDID:S000001106,'Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex that binds the ribosome via the Zuo1p subunit; also involved in pleiotropic drug resistance via sequential activation of PDR1 and PDR5; binds ATP', Chr VIII from 227143-225527, reverse complement, Verified ORF
PROTEIN	469	YOR151C	1.0000	11	6	1	EFLPHITQLEGFESR HGQKGTIGITYRR HGTYDKLDDDGLIAPGVR LLFQELMAMNITPR VYRPLFIVEDDESLGHK YELIAEESEDDSESGK	YOR151C	RPB2 SGDID:S000005677,'RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subunit', Chr XV from 616672-612998, reverse complement, Verified ORF
PROTEIN	470	YOL123W	0.9966	8	4	1	AGSGTSQLDQLAALQALSSSLNK GFGFLSFEKPSSVDEVVK GFGFVTYDSADAVDR IFVGGIGPDVRPK	YOL123W	HRP1 SGDID:S000005483,'Subunit of cleavage factor I, a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences', Chr XV from 87844-89448, Verified ORF
PROTEIN	471	YCR012W	1.0000	1086	29	1	AAGFLLEK AHSSMVGFDLPQR AKGVEVVLPVDFIIADAFSADANTK ALENPTRPFLAILGGAK ALLDEVVK ASAPGSVILLENLR DVTFLNDCVGPEVEAAVK EGIPAGWQGLDNGPESR ELPGVAFLSEK ELPGVAFLSEKK ELQSLLGK GVEVVLPVDFIIADAFSADANTK HELSSLADVYINDAFGTAHR ISHVSTGGGASLELLEGK IVAALPTIK KVLENTEIGDSIFDK KVLENTEIGDSIFDKAGAEIVPK LFAATVAK LSVQDLDLK SSAAGNTVIIGGGDTATVAK TIVWNGPPGVFEFEK TVTDKEGIPAGWQGLDNGPESR VDFNVPLDGK VDFNVPLDGKK VLENTEIGDSIFDK VLENTEIGDSIFDKAGAEIVPK YSLAPVAK YVVLASHLGR YVVLASHLGRPNGER	YCR012W	PGK1 SGDID:S000000605,'3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis', Chr III from 137744-138994, Verified ORF
PROTEIN	472	YNL220W	1.0000	49	10	1	AHLVFDFHQVTDK EIPVGISYSIQGK KLDLFPEDLNILGK LQTIGAEFGVTTGR LVDLLVGK TIDEIYGVVK VGEGPFPTEQLNENGEK VLPGWDQDITK YGDFEYDFEAK YIEDFVGVPVEWVGTGPAR	YNL220W	ADE12 SGDID:S000005164,'Adenylosuccinate synthase, catalyzes the first committed step in the 'de novo' biosynthesis of adenosine', Chr XIV from 234414-235715, Verified ORF
PROTEIN	473	YJL186W	0.9990	4	3	1	NNFYTTLVQAIVENKPADSSPDLSK VNTPEWDAMCEYLTNHVNYLESTHKEAMGEKN YDPFVSNSNDYTPK	YJL186W	MNN5 SGDID:S000003722,'Alpha-1,2-mannosyltransferase, responsible for addition of the second alpha-1,2-linked mannose of the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment', Chr X from 80153-81913, Verified ORF
PROTEIN	474	YKL080W	1.0000	74	11	1	DLITLISNESSQLDADVR EFNYSEELIDQLK EFNYSEELIDQLKK IGSLDTLIVESEELSK IIEILQGLNETSTNAYR SELIDAFGFLGGNAFMK SIKDLITLISNESSQLDADVR SLHDIVKPEDFVLNSEHLTTVLVAVPK TDSWFNETLIGGR TLPINNMPVPEYLENFQWQTR YGLPPHFNIK	YKL080W	VMA5 SGDID:S000001563,'Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane', Chr XI from 284674-285852, Verified ORF
PROTEIN	475	YIL137C	0.9999	3	2	1	AVSNTPVEMVEALDSSQK FINQLSTEEKDQLEDVPYQVPLFGVLPDGK	YIL137C	YIL137C SGDID:S000001399,'Putative metalloprotease', Chr IX from 92788-89948, reverse complement, Uncharacterized ORF
PROTEIN	476	YHR108W	1.0000	5	3	1	DGISQEGTIENAPANPSK FNDTVNQLLEK IIEEEQEDDALVQDLLK	YHR108W	GGA2 SGDID:S000001150,'Golgi-localized protein with homology to gamma-adaptin, interacts with and regulates Arf1p and Arf2p in a GTP-dependent manner in order to facilitate traffic through the late Golgi', Chr VIII from 328306-330063, Verified ORF
PROTEIN	477	YNL239W	0.9336	3	1	1	VFNTVVSTDSTPVTNQK	YNL239W	LAP3 SGDID:S000005183,'Aminopeptidase of cysteine protease family, has a DNA binding activity and acts as bleomycin hydrolase in vitro; transcription is regulated by galactose via Gal4p', Chr XIV from 200570-201934, Verified ORF
PROTEIN	478	YIL022W	0.9998	4	3	1	DPEQIDDDETEGWK EYIVPEILEAYVK VGGFFAETESSR	YIL022W	TIM44 SGDID:S000001284,'Peripheral mitochondrial membrane protein involved in mitochondrial protein import, tethers essential chaperone Ssc1p to the translocon channel at the matrix side of the inner membrane', Chr IX from 311163-312458, Verified ORF
PROTEIN	479	YNL141W	1.0000	19	4	1	IDHGINSQYDEELLDR LQVVQSVSELPLQK LTAHAGEEGPAQFVSDALDLLQVTR RNDIILPEGFPK	YNL141W	AAH1 SGDID:S000005085,'Adenine deaminase (adenine aminohydrolase), involved in purine salvage and nitrogen catabolism', Chr XIV from 359598-360641, Verified ORF
PROTEIN	480	YOR098C	0.9674	9	2	1	AVDNTVPSTTLFNFGGK RLPVSEDTNTKPLFDFGK	YOR098C	NUP1 SGDID:S000005624,'Nuclear pore complex (NPC) subunit, involved in protein import/export and in export of RNAs, possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; potential Cdc28p substrate', Chr XV from 511179-507949, reverse complement, Verified ORF
PROTEIN	481	YEL013W	0.9869	3	4	1	ALTTLVYSDNLNLQR EAVTLLLGYLEDKDQLDFYSGGPLK FLKSDYATFEHIALWTILQLLESHNDKVEDLVK IATSGALIPLTK	YEL013W	VAC8 SGDID:S000000739,'Phosphorylated vacuolar membrane protein that interacts with Atg13p, required for the cytoplasm-to-vacuole targeting (Cvt) pathway; interacts with Nvj1p to form nucleus-vacuole junctions', Chr V from 128825-130561, Verified ORF
PROTEIN	482	YEL055C	0.9999	4	6	1	DEEDEANEDILNIDK QGFAQLFEGEEEFEEIK SEHSNNLGGSLSKLVYFIIPMLK SLLNEPLFSEIFVK VQNSIQFPEFWK YEGDESLIPSVLDLK	YEL055C	POL5 SGDID:S000000781,'Protein with sequence similarity to the human MybBP1A and weak sequence similar to B-type DNA polymerases, not required for chromosomal DNA replication; required for the synthesis of rRNA', Chr V from 51539-48471, reverse complement, Verified ORF
PROTEIN	483	YPR183W	1.0000	116	6	1	LFAGMSPEMAK LFESLHDHAFTLGTR PLTIASDPMSGFFGLQK TELIFVDDNSQDGSVEEVDALAHQGYNVR VAIGEVPFTFGVR YAPGVGIDKDWPMYR	YPR183W	DPM1 SGDID:S000006387,'Dolichol phosphate mannose (Dol-P-Man) synthase of the ER membrane, catalyzes the formation of Dol-P-Man from Dol-P and GDP-Man; required for glycosyl phosphatidylinositol membrane anchoring, O mannosylation, and protein glycosylation', Chr XVI from 900751-901554, Verified ORF
PROTEIN	484	SHUFF_YBR294W	0.8988	1	2	1	TVHAVFKYFTFGGAATVSTLTANGGWWEWWMNASKR VLPNLVIVAFLALIVAK	SHUFF_YBR294W	SUL1 SGDID:S000000498,'High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates', Chr II from 789230-791809, Verified ORF
PROTEIN	485	YGL253W	1.0000	544	20	1	AFIDEQFPQGISEPIPLGFTFSFPASQNK DIYGWTQTSLDDYPIK ELMQQIENFEK ESGDFLAIDLGGTNLR FDKPFVMDTSYPAR GFDIPNIENHDVVPMLQK GGNIPMIPGWVMDFPTGK HFISELEK IFTVPTETLQAVTK INEGILQR IVPAEDGSGAGAAVIAALAQK KGGNIPMIPGWVMDFPTGK LALMDMYK MSSGYYLGEILR NIPIEVVALINDTTGTLVASYYTDPETK NQDLSKFDKPFVMDTSYPAR TGHIAADGSVYNRYPGFK TKYDITIDEESPRPGQQTFEK TTQNPDELWEFIADSLK YDITIDEESPRPGQQTFEK	YGL253W	HXK2 SGDID:S000003222,'Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol; predominant hexokinase during growth on glucose; functions in the nucleus to repress expression of HXK1 and GLK1 and to induce expression of its own gene', Chr VII from 23935-25395, Verified ORF
PROTEIN	486	YDR233C	1.0000	18	3	1	AYTSSAQVMPEVPQHEPSTTQEFNVDELSNELKK LAADVPLEPESK LFLGQGLITK	YDR233C	RTN1 SGDID:S000002641,'Protein of unknown function; has similarity to mammalian reticulon proteins; member of the RTNLA (reticulon-like A) subfamily', Chr IV from 930353-929466, reverse complement, Verified ORF
PROTEIN	487	YER074W	1.0000	227	7	2	AEKDAVSVFGFR DAVSVFGFR KQFVVDVLHPNR KVISNPLLAR QFVVDVLHPNR SVGFGLVYNSVAEAK VISNPLLAR	YIL069C,YER074W	RPS24A SGDID:S000000876,'Protein component of the small (40S) ribosomal subunit; identical to Rps24Bp and has similarity to rat S24 ribosomal protein', Chr V from 306319-306321,306788-307192, Verified ORF
PROTEIN	488	YLR088W	0.9434	2	1	1	NNLMGSWLQEFGTK	YLR088W	GAA1 SGDID:S000004078,'Subunit of the GPI (glycosylphosphatidylinositol):protein transamidase complex, removes the GPI-anchoring signal and attaches GPI to proteins in the ER', Chr XII from 316108-317952, Verified ORF
PROTEIN	489	YGR124W	1.0000	153	17	1	ADWGDDIPTTK AFDTTDEPDVKPYLPEEILWR AISDAMFANPK ASTPMFLLSR DPIGVVTLYMGR EQFSDGVGYSWIDGLR EQFSDGVGYSWIDGLRDTAER KAFDTTDEPDVKPYLPEEILWR LHSFAIGLPNAPDLQAAR LKFDAWFPQK QKEQFSDGVGYSWIDGLR QLAGIDDQGHLHTSGWSR RIPSTPVDYHAIR RLMAEVPYGVLLSGGLDSSLIAAIAAR SSQSPETVYFASELK STMAWGLEAR YFTPDWLDEK	YGR124W	ASN2 SGDID:S000003356,'Asparagine synthetase, isozyme of Asn1p; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway', Chr VII from 739949-741667, Verified ORF
PROTEIN	490	YCR031C	1.0000	174	8	2	ADRDESSPYAAMLAAQDVAAK DESSPYAAMLAAQDVAAK DNSQVFGVAR IEDVTPVPSDSTR IGRIEDVTPVPSDSTR IYASFNDTFVHVTDLSGK IYASFNDTFVHVTDLSGKETIAR VKADRDESSPYAAMLAAQDVAAK	YJL191W,YCR031C	RPS14A SGDID:S000000627,'Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; nearly identical to Rps14Bp and similar to E. coli S11 and rat S14 ribosomal proteins', Chr III from 178216-178210,177902-177496, reverse complement, Verified ORF
PROTEIN	491	YOR051C	1.0000	11	4	1	DVSSFFESAIER FQDVLDNFLQG IPLEYISNLHLK KLDLVGQLEHGK	YOR051C	YOR051C SGDID:S000005577,'Nuclear protein that inhibits replication of Brome mosaic virus in S. cerevisiae, which is a model system for studying replication of positive-strand RNA viruses in their natural hosts', Chr XV from 426086-424848, reverse complement, Uncharacterized ORF
PROTEIN	492	YPR112C	0.9998	7	4	1	AVPQKTDEELAIEK DVFELFNSFGQLK GLPVYLTDDNLR GPKDCFTKPAEADDLINNTSAK	YPR112C	MRD1 SGDID:S000006316,'Essential conserved protein that associates with 35S precursor rRNA and is required for its initial processing at the A(0)-A(2) cleavage sites, shows partial nucleolar localization, contains five consensus RNA-binding domains', Chr XVI from 751917-749254, reverse complement, Verified ORF
PROTEIN	493	YNR038W	0.9545	2	2	1	FDPSQLTAPAASAPEGIVGTTPPAIVPLKR LGASDIAESKEDEGIEDEAASTHQLK	YNR038W	DBP6 SGDID:S000005321,'Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family', Chr XIV from 695597-697486, Verified ORF
PROTEIN	494	YDL192W	1.0000	80	6	1	ILMVGLDGAGK LGEVITTIPTIGFNVETVQYK MLNEDELR NAAWLVFANK NISFTVWDVGGQDR QDLPEAMSAAEITEK	YDL192W	ARF1 SGDID:S000002351,'ADP-ribosylation factor, GTPase of the Ras superfamily involved in regulation of coated formation vesicles in intracellular trafficking within the Golgi; functionally interchangeable with Arf2p', Chr IV from 116322-116867, Verified ORF
PROTEIN	495	YIL109C	1.0000	44	10	1	ASALNNLESLPLK FTAGQTHFYPGFSGK IIVVSGTLPNLGIGK LANDVPMQMDQSDPNDPK LWASSTLVEDK MLVPSELSNASPDYIR QEIPVVENSEFNQR SGIVPSDHRASALNNLESLPLK SGLLATTINTLLQNLDSIPNHDER SYMNPFVTFIEQGR	YIL109C	SEC24 SGDID:S000001371,'Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat; involved in ER to Golgi transport, cargo selection and autophagy; required for the binding of the Sec13 complex to ER membranes; homologous to Lst1p and Lss1p', Chr IX from 160162-157382, reverse complement, Verified ORF
PROTEIN	496	YPR163C	1.0000	121	14	1	EEVDIDWTAAR EEYPVPDAPPYR EREEPDIDWSAAR EREEVDIDWSAAR EREEVDIDWTAAR GSNFQGDGREDAPDLDWGAAR ITIPIETANANTIPLSELAHAK LDPALGGGSSDRREEYPVPDAPPYR NNSNNTRSGGFGGSFGGR REEYPVPDAPPYR SGGFGGSFGGRSRLDPALGGGSSDR TAQLTVEDGDNWEVVGK TAQLTVEDGDNWEVVGKK TVYVSVAAPR	YPR163C	TIF3 SGDID:S000006367,'Translation initiation factor eIF-4B, has RNA annealing activity; contains an RNA recognition motif and binds to single-stranded RNA', Chr XVI from 869951-868641, reverse complement, Verified ORF
PROTEIN	497	YDL124W	1.0000	11	7	1	IPAIAIIGTGTR LPGIIHIDAAEIYR MGTDYVDLYLLHSPFVSK MSDSPADGLDLALKKMGTDYVDLYLLHSPFVSK MSFHQQFFTLNNGNKIPAIAIIGTGTR NIGVSNFAVEDLQR VAEVKPQVNQIEFSPFLQNQTPGIYK	YDL124W	YDL124W SGDID:S000002282,'NADPH-dependent alpha-keto amide reductase; reduces aromatic alpha-keto amides, aliphatic alpha-keto esters, and aromatic alpha-keto esters', Chr IV from 240259-241197, Verified ORF
PROTEIN	498	YIL138C	0.9974	3	1	1	NEQLDSEVEKLESQLSDTK	YIL138C	TPM2 SGDID:S000001400,'Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; appears to have distinct and also overlapping functions with Tpm1p', Chr IX from 89715-89230, reverse complement, Verified ORF
PROTEIN	499	YOL064C	0.9999	3	3	1	ANDEVYNKNYKK GLGAFYSPSSDAESWTK NDNSPVTTGDYAAQTIIINAIK	YOL064C	MET22 SGDID:S000005425,'Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis; dephosphorylates 3'-phosphoadenosine-5'-phosphate and 3'-phosphoadenosine-5'-phosphosulfate, intermediates of the sulfate assimilation pathway', Chr XV from 207176-206103, reverse complement, Verified ORF
PROTEIN	500	YER091C	1.0000	449	28	1	ALDADVVSIEFSK ALDADVVSIEFSKK APEQFDEVVAAIGNK AVDVTALEMVK AYTYFGEQSNLPK DDANYIAEFK DEVNDLEAAGIK ELGIHTRPVLLGPVSYLFLGK GFFSFATQK GLPVAALHVDFVR ITLATYFGTVVPNLDAIK ITVDELFK KAYTYFGEQSNLPK LASAGATEVQIDEPVLVLDLPANAQAAIK LNGQKPVDEFLEAK NVSGQDVAAALEANAK NYPNHIGLGLFDIHSPR PVLLGPVSYLFLGK SAYYTWAAEAFR TQAMQLALALR TQAMQLALALRDEVNDLEAAGIK VFNLPLFPTTTIGSFPQTK VVVATSSSLLHTPVDLNNETK VVVATSSSLLHTPVDLNNETKLDAEIK WSFPRDDVDQK YDLSPIDTLFAMGR YVRPPIIVGDLSR YVRPPIIVGDLSRPK	YER091C	MET6 SGDID:S000000893,'Cobalamin-independent methionine synthase, involved in amino acid biosynthesis; requires a minimum of two glutamates on the methyltetrahydrofolate substrate, similar to bacterial metE homologs', Chr V from 342163-339860, reverse complement, Verified ORF
PROTEIN	501	YLR153C	1.0000	44	8	1	DGYLQNNATEGDAEHITPDNLR EYLHWDAPYTK GVVHTTGGYLLGAALTTR GYVTDMQHYQEMYQQSINEPEK HAFANPDKPALIYEADDESDNK IITFGELLR VLGSVGEPISPDLWEWYHEK YMDTYLKPYPGHYFTGDGAGR	YLR153C	ACS2 SGDID:S000004143,'Acetyl-coA synthetase isoform, required for growth on glucose; expressed under anaerobic conditions', Chr XII from 447576-445525, reverse complement, Verified ORF
PROTEIN	502	YJL190C	1.0000	168	6	2	FLQVMQK HGYIGEFEYIDDHR ILGFVY QFGYVILTTSAGIMDHEEAR SSVLADALNAINNAEK WTANLLPAR	YJL190C,YLR367W	RPS22A SGDID:S000003726,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps22Bp and has similarity to E. coli S8 and rat S15a ribosomal proteins', Chr X from 75301-74909, reverse complement, Verified ORF
PROTEIN	503	YDL004W	1.0000	15	4	1	EAAEAAIQVEVLENLQSVLK IGVLANHVPTVEQLLPGVVEVMEGSNSK IGVLANHVPTVEQLLPGVVEVMEGSNSKK LQFALPHETLYSGSEVTQVNLPAK	YDL004W	ATP16 SGDID:S000002162,'Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr IV from 443026-443508, Verified ORF
PROTEIN	504	YER100W	0.9982	15	4	1	GGQYHGTLTFPSDYPYKPPAIR LIFPEVVQENVETLEK RKLDEGDAANTGDETEDPFTK VISLEEILDPEDR	YER100W	UBC6 SGDID:S000000902,'Ubiquitin-conjugating enzyme involved in ER-associated protein degradation; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway', Chr V from 359558-360310, Verified ORF
PROTEIN	505	YFL048C	1.0000	8	5	1	HGQDGPQVDEIAR KVPNNWQTGEQASLEEGR TAFDADKDKITNYELYK VQQELLSFMTTITK VTYDLEDDNLLK	YFL048C	EMP47 SGDID:S000001846,'Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles, which function in ER to Golgi transport', Chr VI from 40180-38843, reverse complement, Verified ORF
PROTEIN	506	YBR247C	1.0000	17	2	1	EKESQVEDMQDDEPLANEQNTSR EQQDEIEGEELAESER	YBR247C	ENP1 SGDID:S000000451,'Protein associated with U3 and U14 snoRNAs, required for pre-rRNA processing and 40S ribosomal subunit synthesis; localized in the nucleus and concentrated in the nucleolus', Chr II from 714450-712999, reverse complement, Verified ORF
PROTEIN	507	YLL024C	1.0000	921	36	1	ARFEELCADLFR ATAGDTHLGGEDFDNR DAGTIAGLNVLR DNNLLGKFELSGIPPAPR EEFDDQLKELQEVANPIMSK ELQEVANPIMSK FELSGIPPAPR GETKNFTPEQISSMVLGK IASKNQLESIAYSLK IINEPTAAAIAYGLDK IINEPTAAAIAYGLDKK KAEETIAWLDSNTTATK KAEETIAWLDSNTTATKEEFDDQLK LDKSQVDEIVLVGGSTR LIDVDGKPQIQVEFK LIDVDGKPQIQVEFKGETK LVNHFIQEFK LVNHFIQEFKR LVTDYFNGKEPNR LYQAGGAPEGAAPGGFPGGAPPAPEAEGPTVEEVD MKETAESYLGAK NFNDPEVQGDMK NFTPEQISSMVLGK NQAAMNPANTVFDAK NQAAMNPANTVFDAKR NQLESIAYSLK NTISEAGDKLEQADKDAVTK PQIQVEFK PQIQVEFKGETK SEVFSTYADNQPGVLIQVFEGER SINPDEAVAYGAAVQAAILTGDESSK SQVDEIVLVGGSTR TKDNNLLGKFELSGIPPAPR TQDLLLLDVAPLSLGIETAGGVMTK TTPSFVGFTDTER VNDAVVTVPAYFNDSQR	YLL024C	SSA2 SGDID:S000003947,'ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall', Chr XII from 97484-95565, reverse complement, Verified ORF
PROTEIN	508	YLR347C	1.0000	37	4	1	AAVGLIGDIAAMFPDGSIK EAAVMAFGSIMDGPDK LAALNALADSLIFIK YSDAMMNVLAQMISNPNAR	YLR347C	KAP95 SGDID:S000004339,'Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) that mediates nuclear import of cargo proteins via a nuclear localization signal (NLS), interacts with nucleoporins to guide transport across the nuclear pore complex', Chr XII from 826412-823827, reverse complement, Verified ORF
PROTEIN	509	YGL187C	0.9991	6	2	1	EGTVPTDLDQETGLAR LEGIDVFDTKPLDSSR	YGL187C	COX4 SGDID:S000003155,'Subunit IV of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; N-terminal 25 residues of precursor are cleaved during mitochondrial import', Chr VII from 150177-149710, reverse complement, Verified ORF
PROTEIN	510	YDL058W	0.9880	2	1	1	LKGEITSLQTETESTHENLTEK	YDL058W	USO1 SGDID:S000002216,'Essential protein involved in intracellular protein transport, coiled-coil protein necessary for transport from ER to Golgi; required for assembly of the ER-to-Golgi SNARE complex', Chr IV from 345665-351037, Verified ORF
PROTEIN	511	YBL087C	1.0000	149	5	2	ISLGLPVGAIMNCADNSGAR LNRLPAASLGDMVMATVK LPAASLGDMVMATVK LPAASLGDMVMATVKK NLYIIAVK	YBL087C,YER117W	RPL23A SGDID:S000000183,'Protein component of the large (60S) ribosomal subunit, identical to Rpl23Bp and has similarity to E. coli L14 and rat L23 ribosomal proteins', Chr II from 60735-60694,60189-59818, reverse complement, Verified ORF
PROTEIN	512	YPL245W	0.9093	2	1	1	VAAPQNVLNWIDQISVAGK	YPL245W	YPL245W SGDID:S000006166,'Hypothetical protein', Chr XVI from 85586-86950, Uncharacterized ORF
PROTEIN	513	YGR118W	0.9959	51	1	2	VSGVSLLALWK	YPR132W,YGR118W	RPS23A SGDID:S000003350,'Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit, required for translational accuracy; nearly identical to Rps23Bp and similar to E. coli S12 and rat S23 ribosomal proteins; deletion of both RPS23A and RPS23B is lethal', Chr VII from 726978-727042,727363-727735, Verified ORF
PROTEIN	514	YDR369C	0.9239	3	4	1	GSFGASNNGDGDDDDDDGPK GSFGASNNGDGDDDDDDGPKFTFKR SATSRSRGSFGASNNGDGDDDDDDGPK SRGSFGASNNGDGDDDDDDGPK	YDR369C	XRS2 SGDID:S000002777,'Protein required for DNA repair; component of the Mre11 complex, which is involved in double strand breaks, meiotic recombination, telomere maintenance, and checkpoint signaling', Chr IV from 1217572-1215008, reverse complement, Verified ORF
PROTEIN	515	YDR436W	0.9913	3	3	1	GDDGGESPSMAK IYVSPPSPTGDFVHGSCADGDNGSRTNTMVEMK NSTSMHSTSSFNSYENALTDDDDDR	YDR436W	PPZ2 SGDID:S000002844,'Serine/threonine protein phosphatase Z, isoform of Ppz1p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance', Chr IV from 1334813-1336945, Verified ORF
PROTEIN	516	YDR127W	1.0000	43	16	1	DFASSGGYVLHLHR FDKFETESAQLVK FGINVETSTTEPYTYYIPK FLTSLAALVNSTSSQK FVGTAVNFEDNLR IEYLNNEGSLPIK ILVAYGLPVSPDEK ITQTATSTTVSGPPVGTLKPLK LDIMQYMDELTDAAK LKPLIESLPSEFNIIGIESTK MQQRPIAPLVDSLR SPILHNTGYEILGLPHK VIGAVNTVIPLGNKK VIGAVNTVIPLGNKKFK VLNNVLTPVTSDLLPNSAAPGQLTVAQINK VVQVPTSLLAMVDSSIGGK	YDR127W	ARO1 SGDID:S000002534,'Pentafunctional arom protein, catalyzes steps 2 through 6 in the biosynthesis of chorismate, which is a precursor to aromatic amino acids', Chr IV from 704481-709247, Verified ORF
PROTEIN	517	YJR009C	0.9999	14	19	1	DWRGGRTASGNIIPSSTGAAK ELDTAQK ELDTAQKHIDAGAK IVSNASCTTNCLAPLAK KNVEVVALNDPFISNDYSAYMFK KVVITAPSSTAPMFVMGVNEEK KVVITAPSSTAPMFVMGVNEEKYTSDLK LTGMAFR LVSWYDNEYGYSTR NVEVVALNDPFISNDYSAYMFK TASGNIIPSSTGAAK VAINGFGR VINDAFGIEEGLMTTVHSMTATQK VLPELQGK VPTVDVSVVDLTVK VVDLVEHVAK VVDLVEHVAKA VVITAPSSTAPMFVMGVNEEK VVITAPSSTAPMFVMGVNEEKYTSDLK	YJR009C	TDH2 SGDID:S000003769,'Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall ', Chr X from 454596-453598, reverse complement, Verified ORF
PROTEIN	518	YCR053W	1.0000	161	13	1	AGEIVNNWFQELK DNDKSIQYISLSTAHPAK FADAVNNALSGFSNYSFEK FADAVNNALSGFSNYSFEKDVLPEELK FADAVNNALSGFSNYSFEKDVLPEELKK FVVPSGNFGDILAGYFAK LAIATNENDILDR LSFQDLAFAIMR LYIAQEEIPDADLK LYIAQEEIPDADLKDLIK QITVVGATSGDTGSAAIYGLR SIQYISLSTAHPAK VAATLSPAMDILISSNFER	YCR053W	THR4 SGDID:S000000649,'Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway', Chr III from 216693-218237, Verified ORF
PROTEIN	519	YPR010C	1.0000	47	15	1	AGALHGIAQDSTPWIFNEDDTPADYFGEQLAK FRVVFQASPDQSDLEVGQEVLDRIVLVHLGK FVGGNETTTVAIPFVLK GQYPGLYLFGGHSR LSVSVEQVSIAKPMSNDGVSSAVER MTIGMFVESLAGK NHPMAIIRPSFANR PSFANR SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVK STGPVNSLTMQPVK SVRPDQTSQTNVLHYLNDGQVTFR TPGLPIDLEIGYVPPSTR TQVLQYLGDKFR VIFDGKPLNSEDEISNSGYLGNK VVFQASPDQSDLEVGQEVLDR	YPR010C	RPA135 SGDID:S000006214,'RNA polymerase I subunit A135', Chr XVI from 581193-577582, reverse complement, Verified ORF
PROTEIN	520	YEL022W	0.9999	7	5	1	AIFKQVGPSIVSTLFNIYVVASDDHISTR GDIFTQKFFATNQGKEFLK IFSKELWLNIVNIILTLYEDLILSPDIFPDLQK LTPLELLNFDR SSNIAASVFGNESNITADLIK	YEL022W	GEA2 SGDID:S000000748,'Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs), involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; similar to but not functionally redundant with Gea1p', Chr V from 111421-115800, Verified ORF
PROTEIN	521	YGL027C	0.9915	8	2	1	TFTHCLPSGMDDYPR TSHLSLQIPDKEVWK	YGL027C	CWH41 SGDID:S000002995,'Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress', Chr VII from 446148-443647, reverse complement, Verified ORF
PROTEIN	522	YMR072W	1.0000	23	4	1	IIGDKWQSLDQSIK IIGDKWQSLDQSIKDK RPTSAYFLYLQDHR SQVFAQHPDKSQLDLMK	YMR072W	ABF2 SGDID:S000004676,'Mitochondrial DNA-binding protein involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation', Chr XIII from 411568-412119, Verified ORF
PROTEIN	523	YMR280C	0.9284	2	4	1	LLDLPGIASWHTLKLFDMSINLLLKAPNVK PTSTSLNDPTAISFEQDEAPGLPAVKALK QNPENSKNNQFHQK STQLATLVSLSIPRSTEEILFIPQLLTR	YMR280C	CAT8 SGDID:S000004893,'Zinc cluster transcriptional activator necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements', Chr XIII from 831328-827027, reverse complement, Verified ORF
PROTEIN	524	YNL108C	1.0000	17	2	1	GPYPPPPTGIDNDVPLSEHGVEQAHELANYISK GVGEWYKPDRPIIPEPATHEVMSK	YNL108C	YNL108C SGDID:S000005052,'Hypothetical protein', Chr XIV from 419828-419016, reverse complement, Uncharacterized ORF
PROTEIN	525	YEL042W	0.9817	3	3	1	FDVCTSPPTLLDEK TEQNYPELADAVK TFKESNDIYIFSYFYDRTR	YEL042W	GDA1 SGDID:S000000768,'Guanosine diphosphatase located in the Golgi, involved in the transport of GDP-mannose into the Golgi lumen by converting GDP to GMP after mannose is transferred its substrate', Chr V from 73771-75327, Verified ORF
PROTEIN	526	YKL085W	1.0000	82	10	1	DDLFAINASIVR DLAAATAESAPNAAILVISNPVNSTVPIVAQVLK DVIEPSFVDSPLFK FISEVENTDPTQER GVATDLSHIPTNSVVK IHPIGELSSEEEEMLQK KLFGVTTLDSIR SEGIEFFASPVTLGPDGIEK VNVIGGHSGITIIPLISQTNHK VTVLGAGGGIGQPLSLLLK	YKL085W	MDH1 SGDID:S000001568,'Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle', Chr XI from 278767-279771, Verified ORF
PROTEIN	527	YNL138W	1.0000	39	10	1	DGMDFADAMAQSTK ESDPNAVEWVK FGIQVNHSLPQISIDK GGFQSQLTFLR GGIGAVFAELNQGENITK IDTVVLDALQLLK KPDYSSQTFADSLRPINENIIK LEDVTIYQEGYIQNK PINENIIK YTMQGYNLVK	YNL138W	SRV2 SGDID:S000005082,'CAP (cyclase-associated protein) subunit of adenylyl cyclase complex; N-terminus binds adenylyl cyclase and facilitates activation by RAS; C-terminus binds ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis', Chr XIV from 366743-368323, Verified ORF
PROTEIN	528	YGL173C	1.0000	43	16	1	DLIYSFNPQVDNLYK EYITIPLDSSEIR FGFITKPAETQDKK GPIPIEEEFPLNSK GWEYSNLTLNLLKEYRQTFPDFFFR HLNKVIYTRWPYLR IGPMEAIATVFPVTGLVR KLIGSIKPWLMEQLQEK LIEAMQPYLR LIEAMQPYLRKLSPEEK LIGSIKPWLMEQLQEK LSPDLPDEEIPTLELPK MDLDSINPDETEEEFQNR NMHLHPLFLSK SSENVQVDLANFEK VGNDIPVLEDLFPDTSTK	YGL173C	KEM1 SGDID:S000003141,'Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies involved in mRNA decay; plays a role in microtubule-mediated processes, filamentous growth, ribosomal RNA maturation, and telomere maintenance', Chr VII from 180119-175533, reverse complement, Verified ORF
PROTEIN	529	YLR355C	1.0000	636	18	1	AAIEDGWVPGK AQALAVAIGSGYVYQTTFER DLTHVEPPKDLDVILVAPK DNGLNVIIGVR ENGHSPSEAFNETVEEATQSLYPLIGK GALDWYPIFK GINSSYAVWNDVTGK GSYVMNLLSDAAQSETWPAIKPLLTK LLDYFK NALKPVFQDLYESTK NDTFALIGYGSQGYGQGLNLR NLFTVEDAIK NLFTVEDAIKR QINFGGTVETVYER RGALDWYPIFK RGSYVMNLLSDAAQSETWPAIKPLLTK SLEFNSQPDYR TLYFSHGFSPVFK	YLR355C	ILV5 SGDID:S000004347,'Acetohydroxyacid reductoisomerase, mitochondrial protein involved in branched-chain amino acid biosynthesis, also required for maintenance of wild-type mitochondrial DNA', Chr XII from 839252-838065, reverse complement, Verified ORF
PROTEIN	530	YGR218W	0.9933	13	3	1	IGGLLKPSELDD TTADLQPQQVHTFYK VLVEPLLNAVLEDYMNNVPDAR	YGR218W	CRM1 SGDID:S000003450,'Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus', Chr VII from 932544-935798, Verified ORF
PROTEIN	531	YOR234C	0.9995	26	4	1	IEGVATPQEAQFYLGK IEGVATPQEAQFYLGKR IFLYPSNI VNNPNVSLIK	YOR234C	RPL33B SGDID:S000005760,'Ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Ap and has similarity to rat L35a; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable', Chr XV from 779406-779388,778860-778556, reverse complement, Verified ORF
PROTEIN	532	YCL030C	1.0000	112	11	1	AEEEKLTGPIHLDVVK DKGNSALLEYTEKFDGVK FITAQNITPEGLENIGR HGLVGLESLLK ILGPGNQFVTAAK IQEIQDAVHNQALQLPR IVLAGGAQAVAAMAYGTETIPK KIQEIQDAVHNQALQLPR LFNDSALLDAK LVANDVSLKDVENNLNMK TSEIMHLVNPIIENVR	YCL030C	HIS4 SGDID:S000000535,'Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase, phosphoribosyl-AMP cyclohydrolase, and histidinol dehydrogenase activities; catalyzes the second, third, ninth and tenth steps in histidine biosynthesis', Chr III from 68333-65934, reverse complement, Verified ORF
PROTEIN	533	YER105C	0.9995	6	4	1	ETFTASASLGGNRLRNR SDMGIFLELNYCWITSDNK SFIIGHHPLNTHDTGPLSTQK YVENTALLDTTDEIKEIVPLTR	YER105C	NUP157 SGDID:S000000907,'Abundant subunit of the nuclear pore complex (NPC), present on both sides of the NPC, has similarity to Nup170p', Chr V from 372009-367834, reverse complement, Verified ORF
PROTEIN	534	YKL157W	1.0000	40	13	1	FTGILNDNMAGFYR GFDQSLAQSLDTITSK IGDVTSSEIISEEEQQVTTFAFPK IYLDPISNDEK KADEINQIFDAISYSK SFVVWDQIINSISSMK SSHPIEVPVKKADEINQIFDAISYSK TFGIQYPLPK TIELEDPTFFK VNSEQSGIYITSYTDER VWEQYVTDTLQHALSLDSLRSSHPIEVPVKK WLGEETFIK YLSTADVKPDEDKTIYPVFLALK	YKL157W	APE2 SGDID:S000001640,'Zinc-dependent metallopeptidase yscII, may have a role in obtaining leucine from dipeptide substrates; sequence coordinates have changed since RT-PCR analysis showed that the adjacent ORF YKL158W comprises the 5' exon of APE2/YKL157W', Chr XI from 154996-155276,155660-158186, Verified ORF
PROTEIN	535	YER014W	0.9958	4	4	1	FLLDPSDKLVQVPNSISTTVKFLLNPLGK LQESYGQTVSVGGMGFSR SPGVPDVIVDGFNDALQLSK VAVVGGGVSGLCFTYFLSKLR	YER014W	HEM14 SGDID:S000000816,'Protoporphyrinogen oxidase, a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX', Chr V from 182599-184218, Verified ORF
PROTEIN	536	YNL189W	1.0000	6	3	1	GLNINENADFIEK KPQPDWSVVSQALPTLAK RLVELLSHESTLVQTPALR	YNL189W	SRP1 SGDID:S000005133,'Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p to mediate import of nuclear proteins, binds the nuclear localization signal of the substrate during import; may also play a role in regulation of protein degradation', Chr XIV from 284261-285889, Verified ORF
PROTEIN	537	YER049W	1.0000	8	4	1	EIEDSQPYNWGTIHELVNDDLLR ESMTSVISDSVK FRPGMDFTLATK VNQSGDLANLSGLDWDDLSR	YER049W	YER049W SGDID:S000000851,'Hypothetical protein', Chr V from 251727-253661, Uncharacterized ORF
PROTEIN	538	YGL181W	0.8971	4	2	1	CGECGNFYPTWCSVNLGVFLCGR YDEIKPEDFGSRMDDFDGESDR	YGL181W	GTS1 SGDID:S000003149,'Protein containing a zinc-finger in the N-terminus and a long Gln-rich region in the C-terminus; regulates ultradian rhythm, cell size, cell cycle, lifespan, sporulation, heat tolerance, and multidrug transport', Chr VII from 157912-159102, Verified ORF
PROTEIN	539	YDL226C	1.0000	21	7	1	FQETSSYGFQAFSNFTK GGNEPLTEWFK MEKGGNEPLTEWFK RSATPANSSNGANFQK SAGSSNTLSLENFQADPLGTLSR SFEDVNETVIKPHVQQWQSGELSEETKR SITMDQFKPEELLR	YDL226C	GCS1 SGDID:S000002385,'ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport; shares functional similarity with Glo3p', Chr IV from 52174-51116, reverse complement, Verified ORF
PROTEIN	540	YDR394W	1.0000	7	3	1	ELLKPSMSVALHR ENAPSIIFIDEVDSIATK YVILQSDLEEAYATQVK	YDR394W	RPT3 SGDID:S000002802,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B', Chr IV from 1261673-1262959, Verified ORF
PROTEIN	541	YBR223C	0.8968	1	2	1	SVRYSAEMENMAPVNSNNDSDDCVIVSESK WSSSGWFHFQYLQKK	YBR223C	TDP1 SGDID:S000000427,'Tyrosyl-DNA Phosphodiesterase I, hydrolyzes 3'-phosphotyrosyl bonds to generate 3'-phosphate DNA and tyrosine, involved in the repair of DNA lesions created by topoisomerase I', Chr II from 670292-668658, reverse complement, Verified ORF
PROTEIN	542	YMR079W	1.0000	58	10	1	DYGTDTILQDFHYDEKPLIAK EASYISQNYYPER GGLYLSDIGPWR GGLYLSDIGPWRDPK IFILGSSYQK KDYGTDTILQDFHYDEKPLIAK LFKPFLDPVTVSK LLEDAGFIER SEVDESKGGLYLSDIGPWRDPK YIGPEGEAPEAFSMK	YMR079W	SEC14 SGDID:S000004684,'Phosphatidylinositol/phosphatidylcholine transfer protein involved in coordinate regulation of PtdIns and PtdCho metabolism, products of which are regulators in Golgi to plasma membrane transport; functionally homologous to mammalian PITPs', Chr XIII from 424988-424996,425153-426058, Verified ORF
PROTEIN	543	YKR081C	0.9997	7	2	1	NLHDIMVDLSALK TFGYKIYDMIELMVADNFK	YKR081C	RPF2 SGDID:S000001789,'Essential protein involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles', Chr XI from 592182-591148, reverse complement, Verified ORF
PROTEIN	544	YMR264W	1.0000	12	2	1	APMGANAAVDNNAAGGGEFNDPR YSLENTGSVEETVER	YMR264W	CUE1 SGDID:S000004877,'Endoplasmic reticulum membrane protein that recruits the ubiquitin-conjugating enzyme Ubc7p to the ER where it functions in protein degradation; contains a CUE domain that binds ubiquitin to facilitate intramolecular monoubiquitination', Chr XIII from 795804-796415, Verified ORF
PROTEIN	545	YLR401C	1.0000	6	5	1	GIAHIKPEYIVPLK RFFCEFMSFFHRYVPMGICER RLVNETDVAAITLHGR RSIVGDDNSTVK SADWDYVSQVADTLR	YLR401C	DUS3 SGDID:S000004393,'Dihydrouridine synthase, member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region', Chr XII from 924448-922442, reverse complement, Uncharacterized ORF
PROTEIN	546	YER155C	1.0000	11	5	1	AVINLLLMFPLLDHFIKFLKVFNQFGLSFTK LGAVQTILQDFIK QQTNNQAQAEALHQK RYVGAKSCSVSISK TILDVFPGFLLDEPMLK	YER155C	BEM2 SGDID:S000000957,'Rho GTPase activating protein (RhoGAP) involved in the control of cytoskeleton organization and cellular morphogenesis; required for bud emergence', Chr V from 482843-476340, reverse complement, Verified ORF
PROTEIN	547	YAL030W	0.9999	4	2	1	MCLALVIIILLVVIIVPIAVHFSR TAELQAEIDDTVGIMR	YAL030W	SNC1 SGDID:S000000028,'Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins', Chr I from 87287-87388,87502-87753, Verified ORF
PROTEIN	548	YER156C	0.9908	7	3	1	GFFETFNEK VSSSDLDLLYDK VSTVPINSTSFQFR	YER156C	YER156C SGDID:S000000958,'Hypothetical protein', Chr V from 484336-483320, reverse complement, Uncharacterized ORF
PROTEIN	549	YNL118C	1.0000	6	6	1	DSSHELLNILHGNK ILLVQGTESDSWSFPR QNNNDETAHSNSQALLDLLK QNSSVGMQNKYRQEIHIGDSDAYEVFESSSDEEDGK TNLNASAESNSVEWGPGK VPKVKILK	YNL118C	DCP2 SGDID:S000005062,'Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex, which removes the 5' cap structure from mRNAs prior to their degradation; member of the Nudix hydrolase family', Chr XIV from 405566-402654, reverse complement, Verified ORF
PROTEIN	550	YNL037C	1.0000	42	8	1	DIGGSSSTTDFTNEIINK ENTEGEFSGLEHESVPGVVESLK FAFDFAK FTVTLIPGDGVGK GLWHTPADQTGHGSLNVALR GQNVANPTAMILSSTLMLNHLGLNEYATR TIFEAENIPIDWETINIK YGGRFTVTLIPGDGVGKEITDSVR	YNL037C	IDH1 SGDID:S000004982,'Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle', Chr XIV from 559003-557921, reverse complement, Verified ORF
PROTEIN	551	YNR050C	1.0000	25	9	1	AGITVMNEIGLDPGIDHLYAVK ALVDMGMLKDDANEIFSKPIAWNEALK FGIEWADGTTETR GPGLLAPYSPEINDPIMK ILSGFAWLGLFSDAK TKTDVVTSSYISPALR VGGYSSMAATVGYPVAIATK VLADNDVVISLIPYTFHPNVVK YQGFPEFVK	YNR050C	LYS9 SGDID:S000005333,'Saccharopine dehydrogenase (NADP+, L-glutamate-forming); catalyzes the formation of saccharopine from alpha-aminoadipate 6-semialdehyde, which is the seventh step in lysine biosynthesis pathway', Chr XIV from 715390-714050, reverse complement, Verified ORF
PROTEIN	552	YJL109C	0.9907	4	3	1	SVVISQVILNTMTALVSK VFLMFWANQALLIPSPYAK VVENVLGEPFDR	YJL109C	UTP10 SGDID:S000003645,'Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr X from 217227-211918, reverse complement, Verified ORF
PROTEIN	553	YPL207W	0.9129	2	3	1	DDEPIIYEYDENADSEEDEEEGNGSDELGDVEDIGGK GGGCCSSK WEVDEPEYILENALK	YPL207W	YPL207W SGDID:S000006128,'Hypothetical protein', Chr XVI from 159908-162340, Uncharacterized ORF
PROTEIN	554	YBR079C	1.0000	99	13	1	DPFDIFASTASK EVDKLQETDTANYEAMK LATLPAPLDLSAWDIEK LIQGSTEGLVSVGAVAR LLELSNVLHDVDSFNNASYMEK NLVMVYDDYLK PSTLANYYENLVK QAALQSLHDFITAR SGNNLVDLSDADTLQR TAGGSSPATPATPATPATPTPSSGPK VFFVSGDPLLHTTAWK VTFAKDPFDIFASTASK WATPSTVEPVVFK	YBR079C	RPG1 SGDID:S000000283,'Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation; part of a subcomplex (Prt1p-Rpg1p-Nip1p) that stimulates binding of mRNA and tRNA(i)Met to ribosomes', Chr II from 398271-395377, reverse complement, Verified ORF
PROTEIN	555	YHR077C	1.0000	6	5	1	FIATNSKYMPEIVSEFINYLDNGFR GALQSLFKNFIDATFARATELHK IPVISKPVSVQKPLLLK KSEEPSSSKETYEELSK VLGGLYSYRR	YHR077C	NMD2 SGDID:S000001119,'Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance', Chr VIII from 255758-255753,255639-252376, reverse complement, Verified ORF
PROTEIN	556	YMR307W	1.0000	39	2	1	ALNDADIYVIADLAAPATSINR DDPTWTVDLFNSYK	YMR307W	GAS1 SGDID:S000004924,'Beta-1.3-glucanosyltransferase, required for cell wall assembly; localizes to the cell surface via a glycosylphosphatidylinositol (GPI) anchor', Chr XIII from 887002-888681, Verified ORF
PROTEIN	557	YDL195W	1.0000	38	9	1	AIQNLYPNDIAQR DNTVLLWNPESAEQLSQFPAR ISGLESNTTLSEALK LSMDGTEEFLK VATATGSDNDPSILIWDLR VATPLSGGVPPAPLPK VIDDVNEEDWNLLEK VPSLVATSESPR YAPPSQPSMASPFVNK	YDL195W	SEC31 SGDID:S000002354,'Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles, in complex with Sec13p; required for ER-derived transport vesicle formation', Chr IV from 107209-111030, Verified ORF
PROTEIN	558	YLL048C	1.0000	9	5	1	IDNIDISGVDLQR SITIIPQDPTLFSGTIK TGKLNVVIGPTGSGKTSLLMALLGEMYLLNGK TNLDPYDEFSDR VNLISEEQLQQGATR	YLL048C	YBT1 SGDID:S000003971,'Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport; similar to mammalian bile transporters', Chr XII from 46264-41279, reverse complement, Verified ORF
PROTEIN	559	YBR003W	0.9610	2	2	1	DLGKPSGADLKLGIATAPVLFAWK PASSISPLHILHGIKPLNPLTK	YBR003W	COQ1 SGDID:S000000207,'Hexaprenyl pyrophosphate synthetase, catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis', Chr II from 242811-244232, Verified ORF
PROTEIN	560	YDR310C	0.9928	3	2	1	FHQIPSSPSNPVSQPAPVR LVDIDNEGSNANSDSLK	YDR310C	SUM1 SGDID:S000002718,'Transcriptional repressor required for mitotic repression of middle sporulation-specific genes; involved in telomere maintenance, regulated by the pachytene checkpoint', Chr IV from 1084312-1081124, reverse complement, Verified ORF
PROTEIN	561	YGL148W	1.0000	38	4	1	DSFDPEFQHLLNTITR GFEIGSGFQGVSVPGSK TATYDGEEGILAAK TLGTPIAMMIK	YGL148W	ARO2 SGDID:S000003116,'Bifunctional chorismate synthase and flavin reductase, catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids', Chr VII from 226404-227534, Verified ORF
PROTEIN	562	YBR181C	1.0000	298	12	2	EAAAEYAQLLAK EDDVRDFVIR FFGLSKEDDVR FFGLSKEDDVRDFVIR GAIVGPDLAVLALVIVK GEQELEGLTDTTVPK IGQEVDGEAVGDEFK IGQEVDGEAVGDEFKGYVFK KFFGLSKEDDVR KGEQELEGLTDTTVPK KGEQELEGLTDTTVPKR RIGQEVDGEAVGDEFK	YBR181C,YPL090C	RPS6B SGDID:S000000385,'Protein component of the small (40S) ribosomal subunit; identical to Rps6Ap and has similarity to rat S6 ribosomal protein', Chr II from 592769-592764,592411-591707, reverse complement, Verified ORF
PROTEIN	563	YGL039W	0.9795	5	2	1	IATGEPGSGSTFLTK NCCKCDNR	YGL039W	YGL039W SGDID:S000003007,'Oxidoreductase, catalyzes NADPH-dependent reduction of the bicyclic diketone bicyclo[2.2.2]octane-2,6-dione (BCO2,6D) to the chiral ketoalcohol (1R,4S,6S)-6-hydroxybicyclo[2.2.2]octane-2-one (BCO2one6ol)', Chr VII from 423967-425013, Verified ORF
PROTEIN	564	YNL231C	0.9863	3	2	1	EVLHILQTHYPER NELDSLYGGDLK	YNL231C	PDR16 SGDID:S000005175,'Phosphatidylinositol transfer protein (PITP) controlled by the multiple drug resistance regulator Pdr1p, localizes to lipid particles and microsomes, controls levels of various lipids, may regulate lipid synthesis, homologous to Pdr17p', Chr XIV from 217043-215988, reverse complement, Verified ORF
PROTEIN	565	YOR187W	1.0000	16	6	1	DLNKPFLMPVEDIFSISGR GGANFLDYAAIDKAPEER LLDAVDEYIPTPER SKPHVNIGTIGHVDHGK SKPHVNIGTIGHVDHGKTTLTAAITK TTVTGIEMFR	YOR187W	TUF1 SGDID:S000005713,'Mitochondrial translation elongation factor Tu; comprises both GTPase and guanine nucleotide exchange factor activities, while these activities are found in separate proteins in S. pombe and humans', Chr XV from 684031-685344, Verified ORF
PROTEIN	566	YDL084W	1.0000	158	9	1	AAEAGETGAATSATEGDNNNNTAAGDKK DFLLKPELSR FLQNPLEIFVDDEAK GLAISFVSSKEDEEVLAK GSYVGIHSTGFKDFLLKPELSR INLAINYDLTNEADQYLHR LLNASNFPAITVHGHMK LTLHGLQQYYIK TAVFYGGTPISK	YDL084W	SUB2 SGDID:S000002242,'Component of the TREX complex required for nuclear mRNA export; DEAD-box RNA helicase involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56', Chr IV from 305237-306577, Verified ORF
PROTEIN	567	YNL121C	1.0000	30	4	1	FGDIDTATATPTELSTQPAK LAISLEHTGIFK LQQEDIDEAITLFEESADLAR NPTVENFIEATNLLEK	YNL121C	TOM70 SGDID:S000005065,'Component of the TOM (translocase of outer membrane) complex responsible for recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins', Chr XIV from 400539-398686, reverse complement, Verified ORF
PROTEIN	568	YMR308C	1.0000	35	3	1	LGILLPSLLNSLPR LLGFLPSSDAMAIFNR TLLQIVQAFASPDNQIR	YMR308C	PSE1 SGDID:S000004925,'Karyopherin/importin that interacts with the nuclear pore complex; acts as the nuclear import receptor for specific proteins, including Pdr1p, Yap1p, Ste12p, and Aft1p', Chr XIII from 892220-888951, reverse complement, Verified ORF
PROTEIN	569	YMR309C	1.0000	84	15	1	AQQQNWGTPNIFIK DQLDSADYVDNLIDGLSTILSK DQLDSADYVDNLIDGLSTILSKQNNIAVQK DYVLFAAK ENEDSMAK ILGSIFSFVER IMETAAWNIIPAQFK LLDEMQDVYNK LRDEQSIYNLILR LSFQGPPETLR SLEHYDKLSFQGPPETLR SLLNIDPHSSDYLIR SWALLPNMETVLNSLTER VVAQVEDAVNNTQQADLK VVEVLQSVIAELEIPAKLNDEK	YMR309C	NIP1 SGDID:S000004926,'Subunit of the eukaryotic translation initiation factor 3 (eIF3), involved in the assembly of preinitiation complex and start codon selection', Chr XIII from 895425-892987, reverse complement, Verified ORF
PROTEIN	570	YDL182W	1.0000	71	16	1	AILANPSTYEILDPHDFGMK AILANPSTYEILDPHDFGMKR ALDDFGVDYIELTSPVASEQSR EGEQFANAFFDTEK LIDVSVLGIGER LTGWNAIKARVDQLNLNLTDDQIK NDSDVPELATIPAAK PGDYLSNVNNFQLIDSTLR PGDYLSNVNNFQLIDSTLREGEQFANAFFDTEKK QVYELIRTLKSVVSCDIECHFHNDTGCAIANAYTALEGGAR SDLVDLLNIYK SLNIDDVDSIIK SVVSCDIECHFHNDTGCAIANAYTALEGGAR VAVETGVDGVDVVIGTSK VDQLNLNLTDDQIK VDQLNLNLTDDQIKEVTAK	YDL182W	LYS20 SGDID:S000002341,'Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; highly similar to the other isozyme, Lys21p', Chr IV from 133438-134724, Verified ORF
PROTEIN	571	YLR231C	0.9997	7	2	1	GSFPSDYYAFYNQCK VFQYLHDHGVIGDAR	YLR231C	BNA5 SGDID:S000004221,'Kynureninase, required for biosynthesis of nicotinic acid from tryptophan via kynurenine pathway', Chr XII from 607121-605760, reverse complement, Verified ORF
PROTEIN	572	YDL208W	1.0000	20	4	1	MPAVLPFAKPLASK NKEEEYKESFNEVVK RPTSVVFIVPGSNK RPTSVVFIVPGSNKK	YDL208W	NHP2 SGDID:S000002367,'Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing', Chr IV from 87513-87983, Verified ORF
PROTEIN	573	YAR071W	1.0000	10	3	2	FSYGQDLETYYQTGPGYDVVR NLEMETTLANSVNVLNPYTGEMNAK SIMTTWYK	YHR215W,YAR071W	PHO11 SGDID:S000000094,'One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface by the secretory pathway; induced by phosphate starvation and coordinately regulated by PHO4 and PHO2', Chr I from 225451-226854, Verified ORF
PROTEIN	574	YPR032W	0.9845	9	1	1	IFPLPTNVPIVNILPIPR	YPR032W	SRO7 SGDID:S000006236,'Protein with roles in exocytosis and cation homeostasis; functions in docking and fusion of post-Golgi vesicles with plasma membrane; homolog of Sro77p and Drosophila lethal giant larvae tumor suppressor; interacts with SNARE protein Sec9p', Chr XVI from 634120-637221, Verified ORF
PROTEIN	575	YJL173C	0.9476	5	1	1	VDPTEISNVNAPVFR	YJL173C	RFA3 SGDID:S000003709,'Subunit of heterotrimeric Replication Factor A (RF-A), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination', Chr X from 96527-96159, reverse complement, Verified ORF
PROTEIN	576	YDR298C	1.0000	28	6	1	LFGVEGTYATALYQAAAK LGHLLLNPALSLK LGHLLLNPALSLKDR NLDGYVVNLLK NSSIDAAFQSLQK SLKLENVVKPEIK	YDR298C	ATP5 SGDID:S000002706,'Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; homologous to bovine subunit OSCP (oligomycin sensitivity-conferring protein)', Chr IV from 1058810-1058172, reverse complement, Verified ORF
PROTEIN	577	YHR199C	0.9980	5	3	1	APILINNLLDSGIR EPLIGKLLFAHYLAAVDPPSPEAR VVPVLTGLALASIFAK	YHR199C	YHR199C SGDID:S000001242,'The authentic, non-tagged protein was localized to the mitochondria', Chr VIII from 498422-497490, reverse complement, Uncharacterized ORF
PROTEIN	578	YHR027C	1.0000	27	7	1	HLALEIGEVYNDQVEKDAEDETSSDGSK ITGWITQSTPVLLNHGER KITGWITQSTPVLLNHGER LKEDDSSLYEASLNALK LLSDVSDFEGWGHEYIR LSEHFLYLAK SSLADVLSILAMTYSENGK	YHR027C	RPN1 SGDID:S000001069,'Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein?protein interactions', Chr VIII from 164704-161723, reverse complement, Verified ORF
PROTEIN	579	YGL221C	1.0000	14	3	1	FVEFNKDISLEQIVK SYALETVSGETDDLIGYGR VPYVQVASLAAPSAWNQLK	YGL221C	NIF3 SGDID:S000003189,'Protein of unknown function, similar to Listeria monocytogenes major sigma factor (rpoD gene product)', Chr VII from 82291-81425, reverse complement, Verified ORF
PROTEIN	580	YLR167W	1.0000	147	8	1	ECSNPTCGAGVFLANHKDR LAVLSYYK LIFAGK RECSNPTCGAGVFLANHK RECSNPTCGAGVFLANHKDR TITLEVESSDTIDNVK TLSDYNIQK TLSDYNIQKESTLHLVLR	YLR167W	RPS31 SGDID:S000004157,'Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B', Chr XII from 498949-499407, Verified ORF
PROTEIN	581	YJR051W	0.9213	2	1	1	LPPGFEIVQALSK	YJR051W	OSM1 SGDID:S000003812,'Fumarate reductase, catalyzes the reduction of fumarate to succinate, required for the reoxidation of intracellular NADH under anaerobic conditions; mutations cause osmotic sensitivity', Chr X from 529776-531281, Verified ORF
PROTEIN	582	YMR230W	1.0000	140	2	2	EYLNLPEHIVPGTYIQER IHQYLFQEGVVVAK	YOR293W,YMR230W	RPS10B SGDID:S000004843,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps10Ap and has similarity to rat ribosomal protein S10', Chr XIII from 732413-732464,732875-733140, Verified ORF
PROTEIN	583	YJR148W	1.0000	30	7	1	ELVTAPLDGTILEGVTR ERLEPSEWTISER EVAQWINGIQYGETEHGNWSR GEQINIPLLPGEQTGPLAK ITTTQHASKPKPNSELVFGK LEPSEWTISER SFTDHMLTAEWTAEK	YJR148W	BAT2 SGDID:S000003909,'Cytosolic branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed during stationary phase and repressed during logarithmic phase', Chr X from 705660-706790, Verified ORF
PROTEIN	584	YLR409C	0.9959	5	2	1	LPFFLQLSGEK NIHRESYGGVTQATFLNGQPIIVTSGGDNSLK	YLR409C	UTP21 SGDID:S000004401,'Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis of large-scale protein-protein interaction data', Chr XII from 937231-934412, reverse complement, Uncharacterized ORF
PROTEIN	585	YDR121W	0.9845	2	1	1	VKEHDEIEEQGDALQDVEESSEKK	YDR121W	DPB4 SGDID:S000002528,'Shared subunit of DNA polymerase epsilon and of ISW2/yCHRAC chromatin accessibility complex; involved in both chromosomal DNA replication and in inheritance of telomeric silencing', Chr IV from 693582-694172, Verified ORF
PROTEIN	586	YOR176W	0.9998	6	3	1	AVAFSQYPHFSYSTTGSSINELWR LVWQSQVGPKPWLGAQTAEIAEFLGPK SHLQSNQLYSNQLPLDFALGK	YOR176W	HEM15 SGDID:S000005702,'Ferrochelatase, a mitochondrial inner membrane protein, catalyzes the insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; Yfh1p mediates the use of iron by Hem15p', Chr XV from 662402-663583, Verified ORF
PROTEIN	587	YDR098C	0.9951	9	3	1	FGFFDILR FGFFDILRDESVR LVNAAPVMLFMK	YDR098C	GRX3 SGDID:S000002505,'Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; monothiol glutaredoxin subfamily member along with Grx4p and Grx5p; protects cells from oxidative damage', Chr IV from 645032-644175, reverse complement, Verified ORF
PROTEIN	588	YBR121C	1.0000	219	22	1	ADHLVEEVLEAR AFNLMFETAIGPSGQLK AVKLDDDVVKEYEEILAK DAPKVESHLLNMSQDDLASK DAPKVESHLLNMSQDDLASKAELLK DITYNGASWEEGTK DVQEAGSTEPIVK EFLMAEIEHFVDPLDK EYVPSVIEPSFGIGR GYLRPETAQGQFLNFNK IDGYSGPELGELMEK IYQFLMK LDDDVVKEYEEILAK MVDNETLGYFIAR NDELGTPFGVTIDFESAK SVLSFPPLVAPTK VDGVDGEVELDDK VDGVDGEVELDDKLVK VESHLLNMSQDDLASK VESHLLNMSQDDLASKAELLK WEIDLTK YDIGNPVTGETLESPR	YBR121C	GRS1 SGDID:S000000325,'Cytoplasmic and mitochondrial glycyl-tRNA synthase that ligates glycine to the cognate anticodon bearing tRNA; transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation', Chr II from 483361-481358, reverse complement, Verified ORF
PROTEIN	589	YNR035C	1.0000	19	6	1	MLHLQPQNLLIQK QIQSAPQVLYSHEPPLELK QIQSAPQVLYSHEPPLELKR TIILSFPFELAISK TLNEAIEALR VFLQEFVDAR	YNR035C	ARC35 SGDID:S000005318,'Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches; required for cortical localization of calmodulin', Chr XIV from 694049-693021, reverse complement, Verified ORF
PROTEIN	590	YOR232W	1.0000	23	2	1	DLLESVDNFGHALNAFK DLLESVDNFGHALNAFKEEDLQK	YOR232W	MGE1 SGDID:S000005758,'Protein of the mitochondrial matrix involved in protein import into mitochondria; acts as a cochaperone and a nucleotide release factor for Ssc1p; homolog of E. coli GrpE', Chr XV from 774574-775260, Verified ORF
PROTEIN	591	YMR092C	0.9999	9	3	1	GITALTVNPLISGSYDGR ILLYDLQSR SMTVGDDGSVVFYQGPPFK	YMR092C	AIP1 SGDID:S000004698,'Actin cortical patch component, interacts with the actin depolymerizing factor cofilin; required to restrict cofilin localization to cortical patches; contains WD repeats', Chr XIII from 453478-451631, reverse complement, Verified ORF
PROTEIN	592	YOR317W	1.0000	32	12	1	AANEHETAPRRNYQCR AIFTDNSLLPSLIKPVQAAQDVK DSSINIENYLEDAK HSNVVAGVGGASLNVLK IFWTAYNTK IGLKPNDDDKLHLYAATSHK LHIPGGGALGNLVFK LHIPGGGALGNLVFKK MFLGAQSQGIPVVTAYDTLGEK NEEETSQALTSDGWFK PVGIIVPNHAPLTKLAK TKPVGIIVPNHAPLTK	YOR317W	FAA1 SGDID:S000005844,'Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids; involved in the activation of imported fatty acids; localized to both lipid particles and mitochondrial outer membrane; essential for stationary phase', Chr XV from 909340-911442, Verified ORF
PROTEIN	593	YGR162W	1.0000	19	4	1	DATPIEDVFSFNYPEGIEGPDIK IGLEAEIETTTDETDDGTNTVSHILNVLK QTGDDQQESQQQRGYTNYNNGSNYTQK SDEAEAEVEAEAGDAGTK	YGR162W	TIF4631 SGDID:S000003394,'Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that also contains eIF4E (Cdc33p); associates with the poly(A)-binding protein Pab1p, also interacts with eIF4A (Tif1p); homologous to Tif4632p', Chr VII from 824064-826922, Verified ORF
PROTEIN	594	YDL066W	1.0000	59	10	1	ATDTLIPGPGSLELVYKPSDPTTAQPQTLK EPIVIPRIPRLVPR FANILESATLNTVQQDGIMTK GEETSTNSIASIFAWSR GSGVAMAMYNTDESIEGFAHSSFK KYGVGIKCATITPDEAR LILPYLDVDLK LNLFLSTK NILGGTVFREPIVIPR SAYVTTEEFLDAVEKR	YDL066W	IDP1 SGDID:S000002224,'Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate to alpha-ketoglutarate; not required for mitochondrial respiration and may function to divert alpha-ketoglutarate to biosynthetic processes', Chr IV from 334835-336121, Verified ORF
PROTEIN	595	YJL076W	0.9598	3	2	1	KVRPSLSSLSDLVSR NSPLGDAMPHNVHLAELPK	YJL076W	NET1 SGDID:S000003612,'Core subunit of the RENT complex, which is a complex involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure', Chr X from 295162-298731, Verified ORF
PROTEIN	596	YDL111C	0.9106	1	1	1	DDALVVETITSLLNK	YDL111C	RRP42 SGDID:S000002269,'Protein involved in rRNA processing; component of the exosome 3-)5 exonuclease complex with Rrp4p, Rrp41p, Rrp43p and Dis3p', Chr IV from 264110-263313, reverse complement, Verified ORF
PROTEIN	597	YJL123C	1.0000	19	4	1	FDQVLSSQVEGGIR IHLVHDLVNYPSLQYNIESK ISDLFISILPIAIPQK LAFANLENAVK	YJL123C	YJL123C SGDID:S000003659,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to COPI-coated vesicles (early Golgi); YJL123C is a non-essential gene', Chr X from 189361-187925, reverse complement, Uncharacterized ORF
PROTEIN	598	YNL071W	1.0000	44	7	1	DIPVNKPIAVYVEDK DIPVNKPIAVYVEDKADVPAFK LLQSTQGIPSYIVSSK LSINDLLVK NVDVSVAVATPTGLLTPIVK TVIENPLEMLL VPDANAYWLPNENVIR	YNL071W	LAT1 SGDID:S000005015,'Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex, which catalyzes the oxidative decarboxylation of pyruvate to acetyl-CoA', Chr XIV from 491524-492972, Verified ORF
PROTEIN	599	YHR119W	0.9131	2	3	1	EHDEEDENMTSSSSEEEEEEAPDK EKDDEERLPCLCGAPNCK HESSGCFIMGFKFEVILNK	YHR119W	SET1 SGDID:S000001161,'Histone methyltransferase, subunit of the COMPASS (Set1C) complex which methylates histone H3 on lysine 4; required in transcriptional silencing near telomeres and at the silent mating type loci; contains a SET domain', Chr VIII from 346046-349288, Verified ORF
PROTEIN	600	YLR052W	1.0000	3	1	1	FHNADGLNQQGSSTPSTATDANAASTASTHTNTTTFK	YLR052W	IES3 SGDID:S000004042,'Subunit of the INO80 chromatin remodeling complex', Chr XII from 247202-247954, Verified ORF
PROTEIN	601	YOR230W	1.0000	35	7	1	NTAAWHPVIENLVGTVDDDSLVSIYKPYTEESE SLTFSNVVVPDKK SSTPSTYEHISSLRPK TSDKPIWVLGEPK VPIHIVQELMGPATSYASIHSLTR VPIHIVQELMGPATSYASIHSLTRPGDLPEK YNPDDTIAPPQDATEESQTK	YOR230W	WTM1 SGDID:S000005756,'Transcriptional repressor involved in regulation of meiosis and silencing; contains WD repeats', Chr XV from 770801-772114, Verified ORF
PROTEIN	602	YBR169C	0.9985	4	3	1	AKLDDEYSDFASDAEKEK ILIAAEKLKK YEELASLGNIIR	YBR169C	SSE2 SGDID:S000000373,'Member of the heat shock protein 70 (HSP70) family; may be involved in protein folding; localized to the cytoplasm; highly homologous to the heat shock protein Sse1p', Chr II from 575991-573910, reverse complement, Verified ORF
PROTEIN	603	YNR043W	1.0000	60	7	1	DASLPTLSQWK DVSSTQGMQLTVATSELFK FTTEQLEAFNHQFESSNFTAR LNLPTNSSISVTLSQDDLR LYQLPQSTSEISR TLTSAATAPEFER VILTQVGSGPQETNESLIDAK	YNR043W	MVD1 SGDID:S000005326,'Mevalonate pyrophosphate decarboxylase, essential enzyme involved in the biosynthesis of isoprenoids and sterols, including ergosterol; acts as a homodimer', Chr XIV from 701897-703087, Verified ORF
PROTEIN	604	YLR083C	0.9845	2	1	1	YNELNLDDDFQEDSGWK	YLR083C	EMP70 SGDID:S000004073,'Protein whose 24kDa cleavage product is found in endosome-enriched membrane fractions, predicted to be a transmembrane protein', Chr XII from 296095-294092, reverse complement, Verified ORF
PROTEIN	605	SHUFF_YNL220W	0.9752	8	3	1	FPEENVDYVKVKIPK GHNKKESFNGADVNK VILLIVVR	SHUFF_YNL220W	ADE12 SGDID:S000005164,'Adenylosuccinate synthase, catalyzes the first committed step in the 'de novo' biosynthesis of adenosine', Chr XIV from 234414-235715, Verified ORF
PROTEIN	606	YGR082W	0.9650	4	1	1	ALTVYPQPADLLGIYQR	YGR082W	TOM20 SGDID:S000003314,'Component of the TOM (translocase of outer membrane) complex responsible for recognition and initial import steps for all mitochondrially directed proteins; acts as a receptor for incoming precursor proteins', Chr VII from 644048-644599, Verified ORF
PROTEIN	607	YNL209W	1.0000	1325	31	1	ARFEDLNAALFK AVITVPAYFNDAQR DAGAISGLNVLR ENTLLGEFDLK FEDLNAALFK IEAALSDALAALQIEDPSADELR IEAALSDALAALQIEDPSADELRK IINEPTAAAIAYGLGAGK IINEPTAAAIAYGLGAGKSEKER LESYVASIEQTVTDPVLSSK LLSDFFDGK LLSDFFDGKQLEK MVNQAEEFK MVNQAEEFKAADEAFAK QRLESYVASIEQTVTDPVLSSK RTFTTVSDNQTTVQFPVYQGER RTLSSVTQTTVEVDSLFDGEDFESSLTR SINPDEAVAYGAAVQGAILTGQSTSDETK SKIEAALSDALAALQIEDPSADELR SKIEAALSDALAALQIEDPSADELRK SQIDEVVLVGGSTR SSNITISNAVGR STLEPVEQVLK STLEPVEQVLKDAK STSGNTHLGGQDFDTNLLEHFK TFSPQEISAMVLTK TFTTVSDNQTTVQFPVYQGER TGLDISDDAR TLSSVTQTTVEVDSLFDGEDFESSLTR VIDVDGNPVIEVQYLEETK VTPSFVAFTPQER	YNL209W	SSB2 SGDID:S000005153,'Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, functions with J-protein partner Zuo1p; may be involved in the folding of newly-synthesized polypeptide chains; member of the HSP70 family; homolog of SSB1', Chr XIV from 252060-253901, Verified ORF
PROTEIN	608	YDR037W	1.0000	243	20	1	AAAEGVANLHLDEATGEMVSK ELELNFSRPWK EVLLFPTLKPDVLR EVLLFPTLKPDVLREEVK FEVFVATK FEVFVATKEICNAYTELNDPFDQR FHVSISNPEFLAK FIEVETPMMNVIAGGATAK FPSGDQLHTAETGEFLK FPSGDQLHTAETGEFLKK GDIVGVEGYVGR IAPELFLK INMIEELEK KKTDLFADLDPSQYFETR KTDLFADLDPSQYFETR LAMFLTDSNTIR LAMFLTDSNTIREVLLFPTLKPDVLR LECPPPLTNAR TDLFADLDPSQYFETR YLDLIMNK	YDR037W	KRS1 SGDID:S000002444,'Lysyl-tRNA synthetase; also identified as a negative regulator of general control of amino acid biosynthesis ', Chr IV from 525437-527212, Verified ORF
PROTEIN	609	YPR016C	1.0000	20	4	1	GLLVPTQTTDQELQHLR LQDAQPESISGNLR RGLLVPTQTTDQELQHLR TQFENSNEIGVFSK	YPR016C	TIF6 SGDID:S000006220,'Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 (eIF6); may be involved in the biogenesis and or stability of 60S ribosomal subunits', Chr XVI from 593066-592329, reverse complement, Verified ORF
PROTEIN	610	YLR060W	1.0000	173	14	1	FVPLNQTQEFTGDK FVPLNQTQEFTGDKLIEFYK GYWIEEDDSVK LSNANFIAKPLPINK NSGFEIIQGLLGK QQLFDLLGK SLVAMGTHDLDSIEGPFHYR STEQIRPFATAAVLR SYASFIALQDK TEWIADYGAAASGR TTLLPGILK VFETGDVVFK VFETGDVVFKDDKLER YVHIIEDSPVFPVIMDSK	YLR060W	FRS1 SGDID:S000004050,'Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate the active enzyme; evolutionarily distant from mitochondrial phenylalanyl-tRNA synthetase based on protein sequence, but substrate binding is similar', Chr XII from 260980-262767, Verified ORF
PROTEIN	611	YNL178W	1.0000	488	12	1	ALPDAVTIIEPK ALPDAVTIIEPKEEEPILAPSVK DYRPAEETEAQAEPVEA EEEPILAPSVK ELAEEGYSGVEVR FADGFLIHSGQPVNDFIDTATR GLSAVAQAESMK INELTLLVQK LVADGVFYAELNEFFTR RINELTLLVQK RINELTLLVQKR YAPGTIVLYAER	YNL178W	RPS3 SGDID:S000005122,'Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins', Chr XIV from 302682-303404, Verified ORF
PROTEIN	612	YDR483W	1.0000	13	3	1	KLEQSALNSEASEDSEAMDEESK TTMDYITPSFANK WGDAPVHSIAAALFLPK	YDR483W	KRE2 SGDID:S000002891,'Alpha1,2-mannosyltransferase of the Golgi involved in protein mannosylation', Chr IV from 1421149-1422477, Verified ORF
PROTEIN	613	YMR080C	0.9880	5	2	1	ILVCAPSNVAVDHLAAK SREDVESSVSNLALHNLVGR	YMR080C	NAM7 SGDID:S000004685,'ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for efficient translation termination at nonsense codons; involved in telomere maintenance', Chr XIII from 429626-426711, reverse complement, Verified ORF
PROTEIN	614	YDR345C	1.0000	8	4	1	GANYDADALMHDDQPFYK GLTLEEVNDMYAEGVLPWK SSENSNADLPSNSSQVMNMPEEK VAPDHPFIQQELEVIEASVEEAR	YDR345C	HXT3 SGDID:S000002753,'Low affinity glucose transporter of the major facilitator superfamily, expression is induced in low or high glucose conditions', Chr IV from 1164654-1162951, reverse complement, Verified ORF
PROTEIN	615	YOR131C	1.0000	8	2	1	EFRPTKPQPDPLLHIASK SIDILHFIDTLPTEK	YOR131C	YOR131C SGDID:S000005657,'Hypothetical protein', Chr XV from 572839-572183, reverse complement, Uncharacterized ORF
PROTEIN	616	YFR024C-A	0.9854	6	3	1	IRPPPAVDPLFR LAPTNSGGSGGK NRWADDEYDDYDDDYESGYRR	YFR024C-A	LSB3 SGDID:S000002968,'Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization', Chr VI from 203421-203375,203256-201948, reverse complement, Verified ORF
PROTEIN	617	YPR110C	1.0000	16	3	1	DFEVNISSLDAR EANFDLINIDTSIANAFR VTNTTSTDFPGFSK	YPR110C	RPC40 SGDID:S000006314,'RNA polymerase subunit, common to RNA polymerase I and III', Chr XVI from 746833-745826, reverse complement, Verified ORF
PROTEIN	618	YBL032W	0.9928	7	2	1	EEPQENHDNKEEQS IPELYVGAIIGR	YBL032W	HEK2 SGDID:S000000128,'RNA binding protein with similarity to hnRNP-K that localizes to the cytoplasm and to subtelomeric DNA; required for the proper localization of ASH1 mRNA; involved in the regulation of telomere position effect and telomere length', Chr II from 160187-161332, Verified ORF
PROTEIN	619	YBL022C	0.9962	7	4	1	DGPSAGVTMATSFLSLALNK DYVGPPVYTTDR RPLFPGFYK TIIFPKDNLNDWEELPDNVK	YBL022C	PIM1 SGDID:S000000118,'Mitochondrial ATP-dependent protease involved in intramitochondrial proteolysis; involved in degradation of misfolded proteins in mitochondria; required for bigenesis and maintenance of mitochondria', Chr II from 181278-177877, reverse complement, Verified ORF
PROTEIN	620	YPR052C	1.0000	17	3	1	ALSAYMFFANENR RYESEKELYNATLA SENPDITFGQVGK	YPR052C	NHP6A SGDID:S000006256,'High-mobility group non-histone chromatin protein, functionally redundant with Nhp6Bp; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to certain promoters', Chr XVI from 665971-665690, reverse complement, Verified ORF
PROTEIN	621	YMR049C	1.0000	31	8	1	HEEVMPLTAVPEPK LLAEEEGDGEEDYDSSEFSDDTTSLTDR LNIDPNSLIPELPSPK LQTIVDPNIYSK NEQTDDSINPYEPLIDWFTR SLDLYLAPR TLSIDPSGLWLATGSDDGTVR VINSLGVLDAIWHPR	YMR049C	ERB1 SGDID:S000004652,'Protein required for maturation of the 25S and 5.8S ribosomal RNAs; constituent of 66S pre-ribosomal particles; homologous to mammalian Bop1', Chr XIII from 370516-368093, reverse complement, Verified ORF
PROTEIN	622	YNR017W	0.9377	2	1	1	QSLGFEPNINNIISGPGGMHVDTAR	YNR017W	MAS6 SGDID:S000005300,'Essential protein of the mitochondrial inner membrane, component of the mitochondrial import system', Chr XIV from 662915-663583, Verified ORF
PROTEIN	623	YNL096C	1.0000	99	9	1	ALVLFVPVPALSAYHK HVIFLAER ILSQAPSELELQVAK LESFQAVYNK QIVFEIPSQTN TFIDLESSSPELK VLEDMVFPTEIVGK VLEDMVFPTEIVGKR VLLDSKDVQQIDYK	YNL096C	RPS7B SGDID:S000005040,'Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Ap; interacts with Kti11p; deletion causes hypersensitivity to zymocin; has similarity to rat S7 and Xenopus S8 ribosomal proteins', Chr XIV from 444317-444174,443828-443400, reverse complement, Verified ORF
PROTEIN	624	YLL034C	0.9998	4	3	1	NTANMIDPLPLSVVQQFIR PELYEK QESQGEEGENNEGEEDEDIFESMFFAK	YLL034C	RIX7 SGDID:S000003957,'Putative ATPase of the AAA family, required for export of pre-ribosomal large subunits from the nucleus; distributed between the nucleolus, nucleoplasm, and nuclear periphery depending on growth conditions', Chr XII from 73145-70632, reverse complement, Verified ORF
PROTEIN	625	YHR019C	1.0000	175	11	1	EATGVDELTTAGSQDHPFK IAEGSDPSLLLDQR IDDMDELMAGFK KMTDTIGVPIFLTR MTDTIGVPIFLTR QLSALNITIKEDESLPAAIK SVQYVLEDPIAGPLVK TEDNEYQEISASALK TEDNEYQEISASALKK TPAYALFASQQK VTESVDVLMPNVGEITGGSMR	YHR019C	DED81 SGDID:S000001061,'Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA', Chr VIII from 143551-141887, reverse complement, Verified ORF
PROTEIN	626	YLR075W	1.0000	145	6	1	EFPEYFAAQA IYDLGK KWGFTNLDRPEYLK VDIGQIIFSVR WGFTNLDRPEYLK WGFTNLDRPEYLKK	YLR075W	RPL10 SGDID:S000004065,'Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subunits; regulates translation initiation; has similarity to rat L10 ribosomal protein and to members of the QM gene family', Chr XII from 282928-283593, Verified ORF
PROTEIN	627	YKL033W-A	0.9991	6	3	1	AFGAHVIWVPHPEAHAVLGDTEALLAGK GKPFPDIWQLGLK LPITLDEYDER	YKL033W-A	YKL033W-A SGDID:S000007242,'Putative protein of unknown function; similar to uncharacterized proteins from other fungi', Chr XI from 374148-374858, Uncharacterized ORF
PROTEIN	628	YFR031C-A	1.0000	135	8	2	ASGNYVIIIGHNPDENK ASGNYVIIIGHNPDENKTR ASLNVGNVLPLGSVPEGTIVSNVEEKPGDR GVIGVIAGGGR GVIGVIAGGGRVDKPLLK KASLNVGNVLPLGSVPEGTIVSNVEEKPGDR LREEIFIANEGVHTGQFIYAGK PLLKAGRAFHK	YFR031C-A,YIL018W	RPL2A SGDID:S000002104,'Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E. coli L2 and rat L8 ribosomal proteins', Chr VI from 221406-221403,221255-220495, reverse complement, Verified ORF
PROTEIN	629	YDR012W	1.0000	34	13	1	FVIWTEAAFTK GPLVVYAEDNGIVK IINSSEIQSAIRPAGQATQK IINSSEIQSAIRPAGQATQKR IPEIPLVVSTDLESIQK LDQVWGSETVASSK NVPGVETANVASLNLLQLAPGAHLGR PQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNK RGPLVVYAEDNGIVK TGTKPAAVFAETLK TGTKPAAVFAETLKHD VGYTLPSHIISTSDVTR YATASAIAATAVASLVLAR	YDR012W	RPL4B SGDID:S000002419,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarity to E. coli L4 and rat L4 ribosomal proteins', Chr IV from 471850-472938, Verified ORF
PROTEIN	630	YIL074C	1.0000	13	5	1	GIAVFNSPFSNSR GTVVDIPSLIQAVK MLSAPQFAAMK QFSDSHGEIAYLMADISSVNQSEIKDIYEK SDFVTLHVPATPETEK	YIL074C	SER33 SGDID:S000001336,'3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis; isozyme of Ser3p', Chr IX from 222487-221078, reverse complement, Verified ORF
PROTEIN	631	YDL145C	1.0000	113	14	1	DSNLVGQNIISYLQK EDFGSMLLNTFYNNSTK ELPWIISASDDQTIR FALVILPK GIGQPWDAFR GLDFHPTQPIFVSAGDDYTIK GVNWASFHPTLPLIVSGSDDR KLELINSMHETIR LPAVLVAAGAFDAAVQALSK NSKLPAVLVAAGAFDAAVQALSK SSIFAEGGSLPLAYAVAK TIVAAGPGSVLVIHPR TNALQVAMSQHFK VEETVRTIVAAGPGSVLVIHPR	YDL145C	COP1 SGDID:S000002304,'Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secretory pathway', Chr IV from 198177-194572, reverse complement, Verified ORF
PROTEIN	632	YPR063C	0.9845	3	1	1	GNTETTIETTTEVETETAKQ	YPR063C	YPR063C SGDID:S000006267,'Hypothetical protein', Chr XVI from 678317-678277,678190-677809, reverse complement, Uncharacterized ORF
PROTEIN	633	YKL024C	1.0000	5	3	1	DYSFVHLSAGDLLR EGQIVPQEITLALLR ETSMPVIEYFETK	YKL024C	URA6 SGDID:S000001507,'Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines, converting uridine monophosphate (UMP) into uridine-5'-diphosphate (UDP)', Chr XI from 392783-392169, reverse complement, Verified ORF
PROTEIN	634	YMR012W	1.0000	64	20	1	ALEHITVTQGIFTK DANTGEEVTEDFVNDINVK DNIFYSYVSDVSGNYEGK ELDSQIVHYEQNLK FNEMVHEVFSSFK FVEPPTTFSLSDLTIIPR ILAQTPVPGLLATMGNK IQTVLDVLAMIPSSK IVYDADFDSVLEK LGNLFAALK LQLILKPYSAR NFNDEFQAIK NFNDEFQAIKDLTTSTLQDR QWVNGLSSLIMDLKQKK SLSFAPYNPVPPFYR SVDELLTFIEGDSSNSK TIEGDSQLSDEMSIK VSGIDSFEMMR YILDLANTYPLDINFAR YLGKIIELSQKELDSQIVHYEQNLK	YMR012W	CLU1 SGDID:S000004614,'eIF3 component of unknown function; deletion causes defects in mitochondrial organization but not in growth or translation initiation, can rescue cytokinesis and mitochondrial organization defects of the Dictyostelium cluA- mutant', Chr XIII from 291133-294966, Verified ORF
PROTEIN	635	YIR034C	0.9997	4	2	1	EASEFFSHDLLPSLELLPQRK LSVISIDHLPSLLPR	YIR034C	LYS1 SGDID:S000001473,'Saccharopine dehydrogenase (NAD+, L-lysine-forming), catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway', Chr IX from 420733-419612, reverse complement, Verified ORF
PROTEIN	636	YPL048W	1.0000	93	9	1	ASPFLKDEYKDFK GQDYVPAFDVAPDWESYDYAK IVDIFENR LTEAMAINYYLVK STFVLDDWK STFVLDDWKR SVDSAMDAVDKIVDIFENR TQLLGADDDLNAQAQIIR VVTPDAAAEQFAR	YPL048W	CAM1 SGDID:S000005969,'Translational cofactor elongation factor-1 gamma, participates in the regulation of GTP-binding protein EF-1 alpha, may play a redundant role in the regulation of protein synthesis or another GTP-dependent process', Chr XVI from 464398-465645, Verified ORF
PROTEIN	637	YGL120C	1.0000	47	6	1	ELIEQSYPEILR IRVESLLVSPISK QHPLPSEEPLVHHDAGEFK SNLSSTVLELK TLATDILMGLLK YNLELNTTDYESPK	YGL120C	PRP43 SGDID:S000003088,'RNA helicase in the DEAH-box family, involved in release of the lariat-intron from the spliceosome', Chr VII from 283943-281640, reverse complement, Verified ORF
PROTEIN	638	YAL003W	1.0000	308	7	1	AFQSAYPEFSR AIEMEGLTWGAHQFIPIGFGIK IETLKQLNASLADKSYIEGTAVSQADVTVFK QLNASLADK QLNASLADKSYIEGTAVSQADVTVFK SIVTLDVKPWDDETNLEEMVANVK SYIEGTAVSQADVTVFK	YAL003W	EFB1 SGDID:S000000003,'Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site', Chr I from 142176-142255,142622-143162, Verified ORF
PROTEIN	639	YBL015W	1.0000	12	2	1	AIAGHLVEFFR VKEAHELIPLFK	YBL015W	ACH1 SGDID:S000000111,'Acetyl-coA hydrolase, primarily localized to mitochondria; required for acetate utilization and for diploid pseudohyphal growth', Chr II from 194125-195705, Verified ORF
PROTEIN	640	YDR174W	1.0000	23	4	1	AGLPPLSSTEITQEISK DAIIAAPVK DSLVSSLFELSK QAYNVELENYQR	YDR174W	HMO1 SGDID:S000002581,'Chromatin associated high mobility group (HMG) family member involved in genome maintenance; rDNA-binding component of the Pol I transcription system; associates with a 5'-3' DNA helicase and Fpr1p, a prolyl isomerase', Chr IV from 812107-812847, Verified ORF
PROTEIN	641	YLR293C	1.0000	51	5	2	FDVWDTAGQEK LVLVGDGGTGK NLQYYDISAK NVPNWHR SNYNFEKPFLWLAR	YLR293C,YOR185C	GSP1 SGDID:S000004284,'GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Prp20p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; yeast Gsp2p homolog', Chr XII from 721432-720773, reverse complement, Verified ORF
PROTEIN	642	YGR279C	0.9760	10	1	1	SASEVASDLAQLTDFPVIR	YGR279C	SCW4 SGDID:S000003511,'Cell wall protein with similarity to glucanases; scw4 scw10 double mutants exhibit defects in mating', Chr VII from 1049964-1048804, reverse complement, Verified ORF
PROTEIN	643	YGL123W	1.0000	217	10	1	AAFVAIGNTYGFLTPNLWAEQPLPVSPLDIYSDEASAQK AVVVVGDSNGHVGLGIK EFQIIDTLLPGLQDEVMNIKPVQK FKAVVVVGDSNGHVGLGIK GWVPVTK GYWGTNLGQPHSLATK ITTIEEIFLHSLPVK KLLQLAGVEDVYTQSNGK LLQLAGVEDVYTQSNGK RGYWGTNLGQPHSLATK	YGL123W	RPS2 SGDID:S000003091,'Protein component of the small (40S) subunit, essential for control of translational accuracy; has similarity to E. coli S5 and rat S2 ribosomal proteins', Chr VII from 277623-278387, Verified ORF
PROTEIN	644	SHUFF_YLR384C	0.9360	6	4	1	CVKPSRLVDDEYNDLLSCMFSVTVLQYLR LSSLVTDDEMNNTEGSTASIGMKEESMFK LTLPEPEKVIAIILSKLK TALDLIVIYRAETRLPGIPNYGALAVDSELNYSVR	SHUFF_YLR384C	IKI3 SGDID:S000004376,'Subunit of RNA polymerase II elongator histone acetyltransferase complex, involved in maintaining its structural integrity; negatively regulates exocytosis independent of transcription, homolog of human familial dysautonomia (FD) protein', Chr XII from 892900-888851, reverse complement, Verified ORF
PROTEIN	645	YDR165W	1.0000	23	6	1	FIEYNLNENSFVVNNEK KEEIYPLYNVSSLR KEEIYPLYNVSSLRK NLSTFDYNSLIKPYLNDQHLAPPR SNEFDSAIIQSVQGDSNLVTK VPSPGLGAPPIYSYIR	YDR165W	TRM82 SGDID:S000002572,'Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p that catalyzes 7-methylguanosine modification of tRNA', Chr IV from 784868-786202, Verified ORF
PROTEIN	646	YER057C	1.0000	30	2	1	LVEGSIADKAEQVIQNIK VNNLIFLSGQIPVTPDNK	YER057C	HMF1 SGDID:S000000859,'Member of the p14.5 protein family with similarity to Mmf1p, functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro', Chr V from 271124-270735, reverse complement, Verified ORF
PROTEIN	647	YLR337C	0.9958	3	2	1	APALPGHVPPPPVPPVLSDDSK SAPIVGGGVVSSASGSSGTVSSK	YLR337C	VRP1 SGDID:S000004329,'Proline-rich, actin-associated protein involved in cytoskeletal organization and cytokinesis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP)', Chr XII from 805106-802653, reverse complement, Verified ORF
PROTEIN	648	YDL102W	0.9886	2	2	1	AEDPLFVLENNIQVDSR GILPIILDELISAR	YDL102W	CDC2 SGDID:S000002260,'Catalytic subunit of DNA polymerase delta; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)', Chr IV from 276872-280165, Verified ORF
PROTEIN	649	YBR126C	1.0000	9	4	1	AQLTSSSGGNIIVVSNR FVNVGAFPIGIDVDKFTDGLKK GVPQKLHAMEVFLNEHPEWR NSSTGQYEYAMSSGGLVTALEGLKK	YBR126C	TPS1 SGDID:S000000330,'Synthase subunit of trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storage carbohydrate trehalose; also found in a monomeric form; expression is induced by the stress response and repressed by the Ras-cAMP pathway', Chr II from 490386-488899, reverse complement, Verified ORF
PROTEIN	650	YML010W	1.0000	15	3	1	APPQLFNPTMALR FLLPSVDTATIWGVR LLIPVQELPLLLKPNK	YML010W	SPT5 SGDID:S000004470,'Protein that forms a complex with Spt4p and mediates both activation and inhibition of transcription elongation; Spt4p-Spt5p complex also plays a role in pre-mRNA processing', Chr XIII from 247677-250868, Verified ORF
PROTEIN	651	SHUFF_YOR330C	0.9821	12	5	1	DCFFSQEDHQASTLQAFDQVSTCFTHLANQTGEEK DSCTTYEGK GGEVVVNNWLLEIPEK SELLAYSPNSALLETLQSK SLNLERANLGPTMEDDEARLSLK	SHUFF_YOR330C	MIP1 SGDID:S000005857,'Catalytic subunit of the mitochondrial DNA polymerase', Chr XV from 943382-939618, reverse complement, Verified ORF
PROTEIN	652	YPL237W	1.0000	21	6	1	EGTPSANSSIQQEVGLPYSELLSR FFNILR SVSADAEAEKEPTDDIAEALGELSLK SVSADAEAEKEPTDDIAEALGELSLKK TIFSNIQDIAEK YILEYVTCKTCK	YPL237W	SUI3 SGDID:S000006158,'Beta subunit of the translation initiation factor eIF2, involved in the identification of the start codon; proposed to be involved in mRNA binding', Chr XVI from 100496-101353, Verified ORF
PROTEIN	653	YHR021C	0.9161	7	2	2	LSEGTSFR SYFLDVK	YKL156W,YHR021C	RPS27B SGDID:S000001063,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps27Ap and has similarity to rat S27 ribosomal protein', Chr VIII from 148662-148660,148109-147864, reverse complement, Verified ORF
PROTEIN	654	YGR128C	0.9998	2	2	1	AYTGSDEFLSQYK LSALQDNDITSFDDIFFK	YGR128C	UTP8 SGDID:S000003360,'Nucleolar protein required for export of tRNAs from the nucleus; also copurifies with the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr VII from 750096-747955, reverse complement, Verified ORF
PROTEIN	655	YOR206W	0.9997	8	2	1	DPEFYKYLEENDK KSPNLAAFDFEHNIK	YOR206W	NOC2 SGDID:S000005732,'Protein that forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes, as well as a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors', Chr XV from 727513-729645, Verified ORF
PROTEIN	656	YGL135W	1.0000	171	9	2	AGKFPTPVSHNDDLYGK FPTPVSHNDDLYGK FPTPVSHNDDLYGKVTDVR KYNAFIASEVLIK LLGPQLSK NFLETVELQVGLK NWQNVGSLVVK RNFLETVELQVGLK YNAFIASEVLIK	YPL220W,YGL135W	RPL1B SGDID:S000003103,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl1Bp and has similarity to E. coli L1 and rat L10a ribosomal proteins; rpl1a rpl1b double null mutation is lethal', Chr VII from 254646-255299, Verified ORF
PROTEIN	657	YGR204W	1.0000	139	22	1	AALEAGAFEAVTSNHWAEGGK AVIEASNQPVDFHFLYDVNSSVEDK GVPTGFTFPIR KAALEAGAFEAVTSNHWAEGGK LLTPVPSDIDISR LNIDPDTITIK MYGGAAIDILPEAQR QFGVPVVVAINKFETDTEGEIAAIR QFGVPVVVAINKFETDTEGEIAAIRK QMEESSKPLQIPPLPLK SDIVGSPVAELLK SHGGAPDVKPGQPLPSAYTEENIEFVEK SIQGHVPGFAPNLAIIQVGNRPDSATYVR SSGLTPNAVVLVATVR STTTMGLVQALTAHLGK STTTMGLVQALTAHLGKPAIANVR TNPDDLTPEEINK TQYSLSHDATLKGVPTGFTFPIR TVVIDVGTNYVADPSKK VLAEKDVDGFGPTNIGELNKK YILVSGITPTPLGEGK YVDQLNEDPHTHGIIVQLPLPAHLDEDR	YGR204W	ADE3 SGDID:S000003436,'Cytoplasmic trifunctional enzyme C1-tetrahydrofolate synthase, involved in single carbon metabolism and required for biosynthesis of purines, thymidylate, methionine, and histidine', Chr VII from 905939-908779, Verified ORF
PROTEIN	658	SHUFF_YKR095W	0.9580	2	4	1	FDEVEAQEEQNNDNNSQDPSDLANK KSLATNYTNILKVLNAVALQK SIEQLESEEENTDIQNER SLATNYTNILKVLNAVALQKK	SHUFF_YKR095W	MLP1 SGDID:S000001803,'Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs', Chr XI from 619447-625074, Verified ORF
PROTEIN	659	YJR016C	1.0000	294	17	1	AMQFNTIGVSDGISMGTK APSLPEGQEIIKPLSHPIK FSGGSHGFLIGHIVPEAAEGGPIGLVR GAPGMPEMLKPSSALMGYGLGK GQGASQAMLYATGFK GQGASQAMLYATGFKK IDLLVSDKEMAQR ISDTTPLIGDFKPSGK KAPSLPEGQEIIKPLSHPIK NIDIVSAFQSYGEYISK NMPGVMMAMGR PLSHPIK TMELGILPR VFEEEGAFIEALER YLYENNMLHGNTMTVTGDTLAER YSYIITEPK YVMADLINVGGTQSVIK	YJR016C	ILV3 SGDID:S000003777,'Dihydroxyacid dehydratase, catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids', Chr X from 466123-464366, reverse complement, Verified ORF
PROTEIN	660	YDR176W	0.9693	1	2	1	AAAALGLFNEEGLESTGEDFLK RPFDSETENRATENENTQR	YDR176W	NGG1 SGDID:S000002583,'Transcriptional regulator involved in glucose repression of Gal4p-regulated genes; component of transcriptional adaptor and histone acetyltransferase complexes, the ADA complex, the SAGA complex, and the SLIK complex', Chr IV from 814449-816557, Verified ORF
PROTEIN	661	YHR196W	1.0000	5	2	1	SSEEILPVLLGIQGR TLDDLIMALTTDGK	YHR196W	UTP9 SGDID:S000001239,'Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr VIII from 491931-493658, Verified ORF
PROTEIN	662	YOR046C	1.0000	48	12	1	ALPLLLHNPPR ITSQLIVPDSFEK LADIQADPNSPLYSAK LKSEGHEVSILHGDLQTQER NSFNILSAIQK QEDSNLISSEYEVK QINAQVIVGTPGTVLDLMR RDPADLLASLK SFDELGLAPELLK VLITTNVLAR VPTDDWDEVEK YFGDIEMTR	YOR046C	DBP5 SGDID:S000005572,'Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family involved in mRNA export from the nucleus', Chr XV from 415908-414460, reverse complement, Verified ORF
PROTEIN	663	YER089C	0.9999	14	3	1	ALIDTFINTDVK IVAADGFVEMDR TSGPIDLASLEALLGATGGVK	YER089C	PTC2 SGDID:S000000891,'Type 2C protein phosphatase; dephosphorylates Hog1p to limit maximal osmostress induced kinase activity; dephosphorylates Ire1p to downregulate the unfolded protein response; dephosphorylates Cdc28p; role in DNA checkpoint inactivation', Chr V from 337336-335942, reverse complement, Verified ORF
PROTEIN	664	YCR051W	1.0000	20	4	1	AMVREQMLGQGSMAGSGDEPDSK QLEQIITGDNAEEELER SGVADVHGVDGVQGEGVIDSK YTLENDPEEGADEATLQR	YCR051W	YCR051W SGDID:S000000647,'Hypothetical protein', Chr III from 214067-214735, Uncharacterized ORF
PROTEIN	665	YNL313C	0.9966	3	2	1	GLLQMQSLVEELDLK QKVDLNEGYEEDKLLPLALR	YNL313C	YNL313C SGDID:S000005257,'Protein required for cell viability', Chr XIV from 48021-45307, reverse complement, Uncharacterized ORF
PROTEIN	666	SHUFF_YOR338W	0.9976	6	2	1	LVLLLKSRQVIPR SEDSYDCK	SHUFF_YOR338W	YOR338W SGDID:S000005865,'Hypothetical protein', Chr XV from 956895-957986, Uncharacterized ORF
PROTEIN	667	YOR063W	1.0000	372	12	1	AGMTTIVR GDDEANGATSFDR HGHLGFLPR KAHLAEIQLNGGSISEK KTITPMGGFVHYGEIK PVALTSFLGYK SKPVALTSFLGYK SLTTVWAEHLSDEVK SLTTVWAEHLSDEVKR TITPMGGFVHYGEIK TITPMGGFVHYGEIKNDFIMVK TVAVDSVFEQNEMIDAIAVTK	YOR063W	RPL3 SGDID:S000005589,'Protein component of the large (60S) ribosomal subunit, has similarity to E. coli L3 and rat L3 ribosomal proteins; involved in the replication and maintenance of killer double stranded RNA virus', Chr XV from 444688-445851, Verified ORF
PROTEIN	668	YML110C	0.9999	6	2	1	FGDTESTMDIVDINPDMLK LVGDVFSSVANR	YML110C	COQ5 SGDID:S000004578,'2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase, involved in ubiquinone (Coenzyme Q) biosynthesis; located in mitochondria', Chr XIII from 50954-50031, reverse complement, Verified ORF
PROTEIN	669	YOR332W	1.0000	103	7	1	APLEEIVISNDYLNK DEYKPILQSLIVEALLK DLVSGGVVVSNASDKIEINNTLEER DVDLIESMKDDIMR EQSLDGIFEETK EQSLDGIFEETKEK LLSEEALPAIR	YOR332W	VMA4 SGDID:S000005859,'Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane', Chr XV from 943653-944354, Verified ORF
PROTEIN	670	YMR318C	1.0000	43	6	1	AVSISYSALGSIK FTLVGYDKEFSD FVTTYSQPYEDGYVSQGGYANYVR IVSISIPEQHEMLSLKPYGLK IWVETLPVGEAGVHEAFER VGIVGLGGIGSMGTLISK	YMR318C	ADH6 SGDID:S000004937,'NADPH-dependent cinnamyl alcohol dehydrogenase family member with broad substrate specificity; may be involved in fusel alcohol synthesis or in aldehyde tolerance', Chr XIII from 912141-911059, reverse complement, Verified ORF
PROTEIN	671	YGL078C	1.0000	18	5	1	ELASTFMNNPIK FPKPTPIQAVAWPYLLSGK ITQIVEVVDPR SNLLLATDVAAR TFAFGVPAISHLMNDQK	YGL078C	DBP3 SGDID:S000003046,'Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis', Chr VII from 361862-360291, reverse complement, Verified ORF
PROTEIN	672	YCL057W	0.9999	5	2	1	IPESLINSLIK VESPSVSNFVEPFMK	YCL057W	PRD1 SGDID:S000000562,'Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria; with Cym1p, involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteins', Chr III from 24768-26906, Verified ORF
PROTEIN	673	YER006W	1.0000	42	8	1	DPGIPSNFPYK EFDLDGLFSSLDK GGIPNLASAGLSVLNDWR QAPIAANESTIVSEWSK SIVVGVIGYPNVGK SKKDPGIPSNFPYK SKVEHEAELALLNALPAK SVIDASDVILYVLDAR	YER006W	NUG1 SGDID:S000000808,'GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits from the nucleus', Chr V from 162722-164284, Verified ORF
PROTEIN	674	YJL008C	1.0000	52	11	1	APQGPRPGNWDQED ELDEMVVGEITDKNDKNELLK GTVLLHNAQEMLDFSK GTVLLHNAQEMLDFSKGEEK GVDIDGESDEGVKDIREENIYDMLATK IIITNDAATMLR LGAPTPEELGLVETVK LPQNPNAGLFK QFAVAFEVVPR TLAETAGLDVNEVLPNLYAAHNVTEPGAVK TPGLLQLAIK	YJL008C	CCT8 SGDID:S000003545,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr X from 421579-419873, reverse complement, Verified ORF
PROTEIN	675	YOR272W	0.9992	2	2	1	EKDELLHVQDTPMYAPISLK LTSQQQAQEDDDDEVNIEDGK	YOR272W	YTM1 SGDID:S000005798,'Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit', Chr XV from 832812-834194, Verified ORF
PROTEIN	676	YOL040C	1.0000	125	3	1	LAAPENEKPAPVR LLEMSTEDFVK NMIIVPEMIGSVVGIYNGK	YOL040C	RPS15 SGDID:S000005400,'Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S19 and rat S15 ribosomal proteins', Chr XV from 253576-253148, reverse complement, Verified ORF
PROTEIN	677	YLL018C	1.0000	216	13	1	AVEESAEPAQVILGEDGKPLSK AYLAQSPQFNK EIGDFEDLSTENEK FPLEIRPFYTMPDPANPK FVDLDEAKDSDKEVLFR IYTISETPEALPILLEDASR KQYPVEEFKLPK LLGAPSEGGSSVFEVTYFK QQGATLAFLTLR QQLIVADFER SEAEAEAAGLPVVNLDTR VYEIGPVFR YSNSYDFFMR	YLL018C	DPS1 SGDID:S000003941,'Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation', Chr XII from 111574-109901, reverse complement, Verified ORF
PROTEIN	678	YKL127W	1.0000	17	4	1	FKEILGTDEPTVR KLVIGQGGLLSTPAASHIIR LLFDSLNGITGPYGK LVIGQGGLLSTPAASHIIR	YKL127W	PGM1 SGDID:S000001610,'Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism', Chr XI from 203185-204897, Verified ORF
PROTEIN	679	YDR382W	1.0000	260	7	1	AVVESVGAEVDEAR AVVESVGAEVDEARINELLSSLEGK GSLEEIIAEGQK GSLEEIIAEGQKK INELLSSLEGK INELLSSLEGKGSLEEIIAEGQK YLAAYLLLVQGGNAAPSAADIK	YDR382W	RPP2B SGDID:S000002790,'Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm', Chr IV from 1239484-1239816, Verified ORF
PROTEIN	680	YNL102W	0.9845	2	1	1	NGTSIDDYEGDESDGDRIYDEIDEKEYR	YNL102W	POL1 SGDID:S000005046,'Catalytic subunit of the DNA polymerase alpha-primase complex, required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis', Chr XIV from 430089-434495, Verified ORF
PROTEIN	681	YLR259C	1.0000	279	17	1	AAVEEGILPGGGTALVK DRYDDALNATRAAVEEGILPGGGTALVK GFISPYFITDPK GSIDITTTNSYEK GVETLAEAVAATLGPK GYDASKSEYTDMLATGIIDPFKVVR ISSIQDILPALEISNQSR KISSIQDILPALEISNQSR LIDEYGDDFAK NVLIEQPFGPPK QIIENAGEEGSVIIGK SEYTDMLATGIIDPFK SSKVEFEKPLLLLSEK TLEDELEVTEGMR TNEAAGDGTTSATVLGR VEFEKPLLLLSEK VLDEVVVDNFDQK	YLR259C	HSP60 SGDID:S000004249,'Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; similarity to groEL', Chr XII from 665004-663286, reverse complement, Verified ORF
PROTEIN	682	YKL073W	0.8983	7	2	1	FPQNTLLHLKPLLGK IPIVQDQLIK	YKL073W	LHS1 SGDID:S000001556,'Molecular chaperone of the endoplasmic reticulum lumen, involved in polypeptide translocation and folding; member of the Hsp70 family; localizes to the lumen of the ER; regulated by the unfolded protein response pathway', Chr XI from 296074-298719, Verified ORF
PROTEIN	683	YCL040W	1.0000	30	9	1	DGSGVGAALCALVA ETELSLLQSLR GVLLAADLGGTNFR IPDDLLDDENVTSDDLFGFLAR LGFTFSYPVDQTSLNSGTLIR LSTNPGFHLFEK NILVDLHSQGLLLQQYR SKIPDDLLDDENVTSDDLFGFLAR VSGMFLGEVLR	YCL040W	GLK1 SGDID:S000000545,'Glucokinase, catalyzes the phosphorylation of glucose at C6 in the first irreversible step of glucose metabolism; one of three glucose phosphorylating enzymes; expression regulated by non-fermentable carbon sources', Chr III from 50838-52340, Verified ORF
PROTEIN	684	YPL145C	1.0000	73	8	1	ALYTISGQWSGSSK DFDYSVTPEEGALVPEKDDTFLK EHCLIDPEVESPELAR IPAEHLNVKPLEEQHPLESR KAWYDVAGAIK KPLNPFLGELFVGK LGDFNLIAK PLEEQHPLESR	YPL145C	KES1 SGDID:S000006066,'Member of the oxysterol binding protein family, which includes seven yeast homologs; involved in negative regulation of Sec14p-dependent Golgi complex secretory functions, peripheral membrane protein that localizes to the Golgi complex', Chr XVI from 279698-278394, reverse complement, Verified ORF
PROTEIN	685	YDR098C-A	1.0000	11	4	13	FLQNSNLGGIIPTVNGKPVR KYVRPPPMLTSPNDFPNWVK STTEPIQLNNKHDLHLRPGTY YVRPPPMLTSPNDFPNWVK	YML040W,YPR158C-C,YLR227W-A,YGR027W-A,YLR157C-A,YDR098C-A,YLR256W-A,YGR038C-A,YOL103W-A,YJR026W,YPL257W-A,YDR365W-A,YER137C-A	YDR098C-A SGDID:S000007390,'TyA Gag protein; the main structural constituent of virus-like particles (VLPs)', Chr IV from 651123-649801, reverse complement, transposable_element_gene
PROTEIN	686	YDR172W	1.0000	16	6	1	HINAPFMLPIAAK IKGVEEEDISPGFVLTSPK NFNYNNNLQGYQAGFQPQSQGMSLNDFQK STMGGNLLYLTGSVDKR TDVVFMPVSGYSGANLKDHVDPK TIEVGKAYFETEK	YDR172W	SUP35 SGDID:S000002579,'Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a dominant cytoplasmically inherited protein aggregate that alters translational fidelity and creates a nonsense suppressor phenotype', Chr IV from 808321-810378, Verified ORF
PROTEIN	687	YNL085W	0.9949	3	4	1	LLEPTRWGEVFLKLNELNIDSK NDALSLVATEFNTYK VIFPNSVPIESK WYAANEPTTLTNR	YNL085W	MKT1 SGDID:S000005029,'Protein that forms a complex with Pbp1p that may mediate posttranscriptional regulation of HO endonuclease; involved in propagation of M2 dsRNA satellite of L-A virus', Chr XIV from 467133-469625, Verified ORF
PROTEIN	688	SHUFF_YJR092W	0.9596	3	2	1	PLSEMSEESTHNCEANMDEVNSNK RLLKISTVK	SHUFF_YJR092W	BUD4 SGDID:S000003852,'Protein involved in bud-site selection and required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute an axial landmark for next round of budding; potential Cdc28p substrate', Chr X from 598650-602996, Verified ORF
PROTEIN	689	YLR044C	1.0000	1640	23	1	AQYNEIQGWDHLSLLPTFGAK EVIDTILALVK IYEVEGMR KLIDLTQFPAFVTPMGK LIDLTQFPAFVTPMGK LKQVNVNTVFGLPGDFNLSLLDK LLQTPIDMSLKPNDAESEK LLTTIADAAK MIEIMLPVFDAPQNLVEQAK MSANISETTAMITDIATAPAEIDR NATFPGVQMK NPVILADACCSR PVYLGLPANLVDLNVPAK QLLLHHTLGNGDFTVFHR QVNVNTVFGLPGDFNLSLLDK TPANAAVPASTPLK TTYVTQRPVYLGLPANLVDLNVPAK VATTGEWDK VATTGEWDKLTQDK WAGNANELNAAYAADGYAR WGLKPYLFVLNNDGYTIEK YGGVYVGTLSKPEVK YLFER	YLR044C	PDC1 SGDID:S000004034,'Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde; subject to glucose-, ethanol-, and autoregulation; involved in amino acid catabolism', Chr XII from 234082-232391, reverse complement, Verified ORF
PROTEIN	690	YFR010W	1.0000	13	3	1	SVLPIVLLNTLR VVFPFQLDVADMLTPEYAAEK VYPITLSTDATSADLK	YFR010W	UBP6 SGDID:S000001906,'Ubiquitin-specific protease situated in the base subcomplex of the 26S proteasome, releases free ubiquitin from branched polyubiquitin chains; deletion causes hypersensitivity to cycloheximide and other toxic compounds', Chr VI from 165060-166559, Verified ORF
PROTEIN	691	YML105C	0.9997	6	3	1	EIPYGPDFDNIEFK MNEIVPLHSPFLMGHPMTK SQDQENPAFLPGTNNNSNSNNNSSNEK	YML105C	SEC65 SGDID:S000004573,'Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER; interacts with Srp54p; homolog of mammalian SRP19', Chr XIII from 58687-57866, reverse complement, Verified ORF
PROTEIN	692	YKL035W	1.0000	70	11	1	EGNTFLDLSVR FENELDSFFTLFR FGPNPLIK FTNFNTNNLWINLK GGTLISYDGQVR ILNHMIETGAEYIMELTDK QYDSDVPLLLMNSFNTDKDTEHLIK SPNPDEVVK SPNPDEVVKYEIISQQPENVSNLSK THSTYAFESNTNSVAASQMR YEIISQQPENVSNLSK	YKL035W	UGP1 SGDID:S000001518,'UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p', Chr XI from 369534-371033, Verified ORF
PROTEIN	693	YGL171W	0.9976	7	2	1	AADYSVINGNDENHKEDNNESQIVKELDFFR GNVSGIDIPLPIGSFEDLISR	YGL171W	ROK1 SGDID:S000003139,'ATP-dependent RNA helicase of the DEAD box family; required for 18S rRNA synthesis', Chr VII from 182396-184090, Verified ORF
PROTEIN	694	YKL180W	1.0000	169	7	1	ETAQAINGWELTK FVQGLLQNAAANAEAK INKYESSPSHIELVVTEK INKYESSPSHIELVVTEKEEAVAK LYVSHIQVNQAPK YESSPSHIELVVTEKEEAVAK YLEQVLDHQR	YKL180W	RPL17A SGDID:S000001663,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the components of the outer kinetochore DASH complex', Chr XI from 109274-109582,109889-110134, Verified ORF
PROTEIN	695	YGR037C	1.0000	91	7	1	AVNELPTKPSTDELLELYALYK EYIALVDQLIAK MVSQLFEEKAKAVNELPTK QATVGDNDKEKPGIFNMK SQEDAEKEYIALVDQLIAK WEAWENLK YKWEAWENLK	YGR037C	ACB1 SGDID:S000003269,'Acyl-CoA-binding protein, transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes', Chr VII from 559998-559735, reverse complement, Verified ORF
PROTEIN	696	YML123C	1.0000	6	3	1	LALESIDDEGFGWQQVK TLEEINELYHDEIDPATLNFR YQLDVNAKLELAAAAQEQDGEK	YML123C	PHO84 SGDID:S000004592,'High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter; regulated by Pho4p and Spt7p; mutation confers resistance to arsenate; exit from the ER during maturation requires Pho86p', Chr XIII from 25801-24038, reverse complement, Verified ORF
PROTEIN	697	YBR191W	0.9996	34	2	2	AQGVAVQLK IVSTEGNVPQTLAPVPYETFI	YBR191W,YPL079W	RPL21A SGDID:S000000395,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl21Bp and has similarity to rat L21 ribosomal protein', Chr II from 606265-606275,606664-607135, Verified ORF
PROTEIN	698	YMR229C	1.0000	42	15	1	DFGNFEKLLPGAVFLGNITK DSEASSANSDEARAGLIEHVNFKTLK FYKPMQYVLGK GGASALTPLELK LDNTVNVTGLAHITEIADKKPEDLSALFGVGDR LGKVHSSRVGEIENSENLSSR LLPGAVFLGNITK QVANEAASDVLFGNESVK SLFEGLVADAPK SLVNIEDNELPLVSTYENAK SWDDLSIGSIVK TNDIPIGELLPSCEITSVSSSGIELK VASIDREHGFVNAIGK VDIAEVFDTYEEITDK VLGYSPVDDIYQLSTDPK	YMR229C	RRP5 SGDID:S000004842,'Protein required for the synthesis of both 18S and 5.8S rRNA; C-terminal region is crucial for the formation of 18S rRNA and N-terminal region is required for the 5.8S rRNA; component of small ribosomal subunit (SSU) processosome', Chr XIII from 731122-725933, reverse complement, Verified ORF
PROTEIN	699	YBR218C	1.0000	54	11	1	AGITWIGPPAEVIDSVGDK EANYLLGDIVK EGDDVADAFQR LLHYLADLAVNGSSIK NAGTAEFLVDNQNR NFLAPAEPDEEIEVTIEQGK SAGGNGVRLDGGNAYAGATISPHYDSMLVK SLVPNIPFQMLLR SNPSVPHLHDAQGNVINVTK VFDALNDLEQLK VVGDLAQFMVSNK	YBR218C	PYC2 SGDID:S000000422,'Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate; highly similar to isoform Pyc1p but differentially regulated; mutations in the human homolog are associated with lactic acidosis', Chr II from 662244-658702, reverse complement, Verified ORF
PROTEIN	700	YOR361C	1.0000	55	11	1	AGKVVNMEFPIDEATGKTK DFSFAPEGVK EWSAQFEEQDAMEADTAMR IFNIAGNLVK NFAWRPRPASILSNAER SDLQFYDMDYPGEK TFANTVSWSPAGR TSVFWNSMFNEEDSLVESR VVNMEFPIDEATGK YNSDDFDTEFREPDMPTFVPSSSLK YVTAWSSSLK	YOR361C	PRT1 SGDID:S000005888,'Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation; part of a subcomplex (Prt1p-Rpg1p-Nip1p) that stimulates binding of mRNA and tRNA(i)Met to ribosomes', Chr XV from 1017650-1015359, reverse complement, Verified ORF
PROTEIN	701	YGL026C	1.0000	161	17	1	AQFIAATDAQALLGFK DTPLAVGFGVSTR EHFQSVGSVADGVVIGSK EILDEFDENHKHPIR FHSATLTAGRPGVFHGVK FWVTNLK GDKDVQSVAEVLPK GFDEAVADPTFWEDFK INNALAQVLLAK LLGVEAGGDGVDTK MGTTGVQSSVASDLDELISR NALVTFMTAGYPTVK SLYSYIGRPSSLHK TMKPDQHLVINISGR TTYYVVGSAIGPHPYPTLVR TYVLQDSDGQVHDTHSVSAGLDYPGVGPELAYWK VLSKDEFFAFQK	YGL026C	TRP5 SGDID:S000002994,'Tryptophan synthase involved in tryptophan biosynthesis, regulated by the general control system of amino acid biosynthesis', Chr VII from 448540-446417, reverse complement, Verified ORF
PROTEIN	702	YBR143C	1.0000	35	6	1	ATGQEMDVVSEEPLIEWLAANYK KVAEVAVQNFITNDKVNVK LSVLSAITSTQQK MLTDEYGTASNIK NFGATLEFITDK SSEGAQFVTGFGGIGAMLR	YBR143C	SUP45 SGDID:S000000347,'Polypeptide release factor involved in translation termination; mutant form acts as a recessive omnipotent suppressor', Chr II from 532176-530863, reverse complement, Verified ORF
PROTEIN	703	YOR326W	1.0000	9	6	1	ASTNETLINILEGLEK DTVSDGHLEVLK ILATNPIMEAFGNAK LGILSLLDEESR LISQYQVADYESPIPQEILR LLEDTEILNQEITEGLLK	YOR326W	MYO2 SGDID:S000005853,'One of two type V myosins, involved in polarized distribution of mitochondria; required for mitochondrion and vacuole inheritance and nuclear spindle orientation; moves multiple cargo; reversibly phosphorylated in vivo', Chr XV from 925718-930442, Verified ORF
PROTEIN	704	YJR064W	1.0000	10	6	1	DVDFDLIK GFAQALDTIPMTLAENSGLDPIGTLSTLK HKLDISSVEEYQK LDISSVEEYQK LINGVILDKDFSHPQMPK WVGGQELEHIAISTNGR	YJR064W	CCT5 SGDID:S000003825,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr X from 555829-557517, Verified ORF
PROTEIN	705	SHUFF_YGL201C	0.9880	2	2	1	AVTELNLLIDQTKTDEEK TDYELFEFPDMEESEGFRNTAAFR	SHUFF_YGL201C	MCM6 SGDID:S000003169,'Protein involved in DNA replication; component of the Mcm2-7 hexameric complex that binds chromatin as a part of the pre-replicative complex', Chr VII from 120911-117858, reverse complement, Verified ORF
PROTEIN	706	YOR276W	0.9993	5	1	1	KKGSGEDDEEETETTPTSTVPVATIAQETLK	YOR276W	CAF20 SGDID:S000005802,'Phosphoprotein of the mRNA cap-binding complex involved in translational control, repressor of cap-dependent translation initiation, competes with eIF4G for binding to eIF4E', Chr XV from 841332-841817, Verified ORF
PROTEIN	707	YLR335W	1.0000	15	6	1	HAADSQNNKPSFVFGQAAAKPSLEK LKALNLQFKAK SSDSNDSNPSFSFSIPSK TTANLPANSSTSPAPSIPSTGFK VDDLVLGKPLADLRPLFTR YEPLAPGNDNLIKAPTVAADGKLVTYIVK	YLR335W	NUP2 SGDID:S000004327,'Protein involved in nucleocytoplasmic transport, binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization', Chr XII from 797430-799592, Verified ORF
PROTEIN	708	YDR129C	1.0000	52	8	1	AIDLDDKGWVEK ALENTNYAVDLGR GFSLVGIEGSDIVDGNK KFPILTQEDLFSTIEK LINDSVPDTIDTR LLEDDETLEQFLR TGAAPQTTFNVAPNSTPIVSTAATGLQHK VELDDYVGLVAK	YDR129C	SAC6 SGDID:S000002536,'Fimbrin, actin-bundling protein; cooperates with Scp1p (calponin/transgelin) in the organization and maintenance of the actin cytoskeleton', Chr IV from 715376-715356,715244-713337, reverse complement, Verified ORF
PROTEIN	709	YLL026W	1.0000	73	10	1	AGANSMIQNVVDSDTISETAAR ALTILTLAQK DLSSEVVGQMDAIK GADTNTPLEYLSK IIDDDVPTILQGAK ILDSALVTAAQLAK IPQQQPAPAEITPSYALGK LFSLDLAALTAGAK QKEASLQEELEPLR YFAIPDIK	YLL026W	HSP104 SGDID:S000003949,'Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responsive to stresses including: heat, ethanol, and sodium arsenite; involved in [PSI+] propagation', Chr XII from 88622-91348, Verified ORF
PROTEIN	710	YER083C	0.9998	6	2	1	ITGQASSHLNAESPLDAPSAAK LVKLVSLVPEGVIPVANLKGK	YER083C	GET2 SGDID:S000000885,'Subunit of the GET complex; required for meiotic nuclear division and for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion; may be involved in cell wall function', Chr V from 327027-326170, reverse complement, Verified ORF
PROTEIN	711	YNL281W	0.8988	2	1	1	IELTQVSSITGDSNVSQR	YNL281W	HCH1 SGDID:S000005225,'Heat shock protein regulator that binds to Hsp90p and may stimulate ATPase activity; originally identified as a high-copy number suppressor of a HSP90 loss-of-function mutation; GFP-fusion protein localizes to the cytoplasm and nucleus', Chr XIV from 108467-108928, Verified ORF
PROTEIN	712	YOR153W	1.0000	48	10	1	AVQSELDWMER ESYANHLAEVAMATYGLSHTR GLDSATALEFIR GSITAAEDKHEFSQSIIYQTK ILNNVDGWVKPGTLTALMGASGAGK LDPNSENFSSAAWVK NLSASGASADVAYQSTVVNIPYK QTTADFLTSVTSPSER TMIDYFESHGAHK TTLLDCLAERVTMGVITGDILVNGIPR	YOR153W	PDR5 SGDID:S000005679,'Short-lived membrane ABC (ATP-binding cassette) transporter, actively exports various drugs, expression regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth', Chr XV from 619841-624376, Verified ORF
PROTEIN	713	YBL027W	1.0000	201	5	2	ALVEHIIQAK KVWLDPNETSEIAQANSR LAASVVGVGK LPSQVVWIR VWLDPNETSEIAQANSR	YBR084C-A,YBL027W	RPL19B SGDID:S000000123,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Bp and has similarity to rat L19 ribosomal protein; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal', Chr II from 168426-168427,168812-169379, Verified ORF
PROTEIN	714	YML103C	0.9728	2	2	1	APEQFIENFLTNDTFEK LHIVYSLLVNPDIDLETYSFIDNDR	YML103C	NUP188 SGDID:S000004571,'Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex and of the nuclear envelope, also involved in nuclear envelope permeability, interacts with Pom152p and Nic96p', Chr XIII from 67549-62582, reverse complement, Verified ORF
PROTEIN	715	YIL051C	1.0000	180	5	1	ANNFVYVSGQIPYTPDNKPVQGSISEK LAPPAAASYSQAMK NFAEFNSVYAK NILAESNSSLDNIVK VNVFLADMK	YIL051C	MMF1 SGDID:S000001313,'Mitochondrial protein involved in maintenance of the mitochondrial genome', Chr IX from 258279-257842, reverse complement, Verified ORF
PROTEIN	716	YPL129W	1.0000	8	2	1	LNEDDLVGVVQMVTDNK VIYHLHPTFANPNR	YPL129W	TAF14 SGDID:S000006050,'Subunit (30 kDa) of TFIID, TFIIF, and SWI/SNF complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, contains a YEATS domain', Chr XVI from 305297-305305,305411-306136, Verified ORF
PROTEIN	717	SHUFF_YMR224C	0.9957	1	4	1	EDKEEQTEWEFESNFGFFPFSMEFTNDIEEK ISIDEITKVIDIIIITHSR KLQASTVDKSVVLSTLVR MTDFCDSTNDDGMSAPANNPSHITVDTEK	SHUFF_YMR224C	MRE11 SGDID:S000004837,'Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-strand breaks and in telomere stability, exhibits nuclease activity that appears to be required for RMX function; widely conserved', Chr XIII from 720652-718574, reverse complement, Verified ORF
PROTEIN	718	YJR059W	0.9768	3	3	1	MLPLPIANPNDFLPEDMK RKNNASVGFSNGSVSSHK SNSMASHHFPNENIVYNPYGISPNHAR	YJR059W	PTK2 SGDID:S000003820,'Putative serine/threonine protein kinase involved in regulation of ion transport across plasma membrane; enhances spermine uptake', Chr X from 545702-548158, Verified ORF
PROTEIN	719	YOR095C	1.0000	20	7	1	AYFGNSDGSVEVTEK IDALESLGNPLEDAKR IIGIGSGSTVVYVAER LLVGVVETGLFIDNASK LQLGSIEQYPR QGVPIEIVPSSYVR VKNDLLEQLHAEK	YOR095C	RKI1 SGDID:S000005621,'Ribose-5-phosphate ketol-isomerase, catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis', Chr XV from 504329-503553, reverse complement, Verified ORF
PROTEIN	720	YMR116C	1.0000	376	10	1	AAEPHAVSLAWSADGQTLFAGYTDNVIR ADDDSVTIISAGNDK AMYTLSAQDEVFSLAFSPNR DGEIMLWNLAAK GTLEGHNGWVTSLATSAGQPNLLLSASR LWDVATGETYQR VFSLDPQYLVDDLRPEFAGYSK VVPNEKADDDSVTIISAGNDK VWQVMTAN YWLAAATATGIK	YMR116C	ASC1 SGDID:S000004722,'WD repeat protein (G-beta like protein) involved in translation regulation; required for repression of Gcn4p activity in the absence of amino-acid starvation; core component of the ribosome; ortholog of mammalian RACK1', Chr XIII from 500687-500151,499877-499455, reverse complement, Verified ORF
PROTEIN	721	YCL054W	1.0000	5	2	1	DIDIATVEAMTLAHQLALGQK DSAADADDLESELNAMYSDYK	YCL054W	SPB1 SGDID:S000000559,'AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the putative tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants', Chr III from 31449-33974, Verified ORF
PROTEIN	722	YBR149W	0.9999	8	3	1	AIGVSNFSIEYLER TMYAADGDYLETYK VWPVLWDEVDR	YBR149W	ARA1 SGDID:S000000353,'Large subunit of NADP+ dependent arabinose dehydrogenase, involved in carbohydrate metabolism; small subunit is unidentified', Chr II from 539981-541015, Verified ORF
PROTEIN	723	YNL112W	1.0000	39	10	1	AGATGTAISFFTEQNK EANQNIPPELLK GGRNSDRNSYNDR LIDMLEIGK MLDMGFEPQIR QTLMWSATWPK SNYNQPQELIKPNWDEELPK SNYNQPQELIKPNWDEELPKLPTFEK SPIMVATDVAAR VTYLVLDEADR	YNL112W	DBP2 SGDID:S000005056,'Essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated mRNA decay and rRNA processing', Chr XIV from 413641-414913,415916-416283, Verified ORF
PROTEIN	724	YDR226W	1.0000	171	8	1	FHAAHLATGDMLR IFNPPKEDMKDDVTGEALVQR LAAYHAQTEPIVDFYK LAAYHAQTEPIVDFYKK MVLIGPPGAGK RLAAYHAQTEPIVDFYK TGIWAGVDASQPPATVWADILNK TIPQAEKLDQMLK	YDR226W	ADK1 SGDID:S000002634,'Adenylate kinase, required for purine metabolism; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence', Chr IV from 916482-917150, Verified ORF
PROTEIN	725	YJL080C	1.0000	172	33	1	AEYGVEMDFLQK APIEIPLEK APSATYAGYVWGADTR AQETGEVELEITGSR DLPSLGSNAAFANVK EAADVIINVPR EVDVPASIYEYVSER FHGSLIGPHGTYR FNMIVGPGGSNIK FTIEEVGAPTSSEEGDITMR IFESILNSPSSK ISLPSIQSLPTAETVTIHISAK ITITGAPENVEK KLTKPINAVIEVPSK LIMEDISEQEGHLQIK LTYEPIDLSSILSDGEEK LTYEPIDLSSILSDGEEKEVTK LTYEPIDLSSILSDGEEKEVTKDTSNDSAK MVINVPAEHVPR NIQEAFTLDLQSQLSITKPELSR RFNMIVGPGGSNIKK RVESIVAEASDFVTEVLK SGDIVILGPR SVDIPNADSENKDITVQGPQK SYVVESLDISK TFLVSGVAANVHEAK TFLVSGVAANVHEAKR TKFTIEEVGAPTSSEEGDITMR TVEVTLTGLEYNLTHAK TYEFSEEVQDSLFKPSSATWK VESIVAEASDFVTEVLK VSWGPNMKPAVSNSPSPSPSAPSLTTGLGAK YNVFINFPR	YJL080C	SCP160 SGDID:S000003616,'Essential RNA-binding G protein effector of mating response pathway, predominantly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins', Chr X from 289143-285475, reverse complement, Verified ORF
PROTEIN	726	YGR275W	0.9845	5	1	1	ATGAPSANQGDEALSVDDIR	YGR275W	RTT102 SGDID:S000003507,'Component of both the SWI/SNF and RSC chromatin remodeling complexes, suggested role in chromosome maintenance; possible weak regulator of Ty1 transposition', Chr VII from 1043282-1043755, Verified ORF
PROTEIN	727	YPL225W	1.0000	7	3	1	FDDEIYENFMER HGLNDWIVGQK KIEDYNFGTLLR	YPL225W	YPL225W SGDID:S000006146,'Hypothetical protein', Chr XVI from 126006-126446, Uncharacterized ORF
PROTEIN	728	YLR386W	0.9659	2	3	1	AAALELEKLVKQCVLEGDYDR AVSEEDEYSSDMIR IYAINPDTRVFLVDWLK	YLR386W	VAC14 SGDID:S000004378,'Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; activator of Fab1p', Chr XII from 893628-896270, Verified ORF
PROTEIN	729	YPR145W	1.0000	134	12	1	AFDTTGEPDAKPYLPEEILWR ASTPMFLLSR DPIGITTLYMGR DTAEAVISDEMFASPK IPSTPIDYMAIR KAFDTTGEPDAKPYLPEEILWR LHTAGWTSLHSFAIGLPNAPDLQAAR LKFDALFPQK RIPSTPIDYMAIR STMAWGLEAR TVYFASELK YFTPDWLDEK	YPR145W	ASN1 SGDID:S000006349,'Asparagine synthetase, isozyme of Asn2p; catalyzes the synthesis of L-asparagine from L-aspartate in the asparagine biosynthetic pathway', Chr XVI from 822616-824334, Verified ORF
PROTEIN	730	YER133W	0.9476	6	1	1	GVSFTFGPDVVNR	YER133W	GLC7 SGDID:S000000935,'Catalytic subunit of type 1 serine/threonine protein phosphatase, involved in many processes including glycogen metabolism, sporulation, and mitosis; interacts with multiple regulatory subunits; predominantly isolated with Sds22p', Chr V from 432491-432667,433193-433954, Verified ORF
PROTEIN	731	YNL244C	1.0000	25	4	1	KTLTTVQGVPEEYDLKR SFDPFADTGDDETATSNYIHIR TLTTVQGVPEEYDLK TLTTVQGVPEEYDLKR	YNL244C	SUI1 SGDID:S000005188,'Translation initiation factor eIF1; component of a complex involved in recognition of the initiator codon; modulates translation accuracy at the initiation phase', Chr XIV from 187497-187171, reverse complement, Verified ORF
PROTEIN	732	YJL111W	1.0000	63	7	1	AQDAEVGDGTTSVTILAGELMK EAKPFLEEGISSHLIMK FVWEPALVK INALNSATEATNLILSVDETITNK LIVAGGGATEMEVSK LPIGDLATQFFADR TFSYAGFEQQPK	YJL111W	CCT7 SGDID:S000003647,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr X from 207795-209447, Verified ORF
PROTEIN	733	YNL135C	1.0000	27	4	1	GFPGLIPPNSTLVFDVELLK GWDVGIPK ISPGDGATFPK LTIPGPYAYGPR	YNL135C	FPR1 SGDID:S000005079,'Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin; also binds to the nonhistone chromatin binding protein Hmo1p and may regulate its assembly or function', Chr XIV from 372228-371884, reverse complement, Verified ORF
PROTEIN	734	YHL015W	1.0000	96	4	1	QLENVSSNIVK TWETYEMR YIDLEAPVQIVK YIDLEAPVQIVKR	YHL015W	RPS20 SGDID:S000001007,'Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; has similarity to E. coli S10 and rat S20 ribosomal proteins', Chr VIII from 75409-75774, Verified ORF
PROTEIN	735	SHUFF_YPR158W-B	0.9549	2	5	1	ENIMTTDGANPNDK IPIVKVVVAKIHDAR NHEGLDLHSEWYSPCQAKSSLK NMNNYHALTNPLTK VHVRIAVLIGQTDIFMVDLIKPSTIER	SHUFF_YPR158W-B	YPR158W-B SGDID:S000007364,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr XVI from 844705-846009,846011-849976, transposable_element_gene
PROTEIN	736	YLR264W	1.0000	46	4	2	ENDILVLMESER GPVRENDILVLMESER TPVTLAK VEFLEDTSR	YLR264W,YOR167C	RPS28B SGDID:S000004254,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps28Bp and has similarity to rat S28 ribosomal protein', Chr XII from 673133-673336, Verified ORF
PROTEIN	737	YOR209C	1.0000	17	3	1	AQDLIMQGIMK NAGLALTDTFGTDDFLK SFRPPYSDAYVGVR	YOR209C	NPT1 SGDID:S000005735,'Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD+ biosynthesis; required for silencing at rDNA and telomeres and has a role in silencing at mating-type loci; localized to the nucleus', Chr XV from 737727-736438, reverse complement, Verified ORF
PROTEIN	738	SHUFF_YPL221W	0.9924	3	3	1	KRAINLGIVLNLVINAAIIDVLNLR RAINLGIVLNLVINAAIIDVLNLRTWR SAQLISLNIIGLRKTLLVVQSLDK	SHUFF_YPL221W	YPL221W SGDID:S000006142,'Putative protein of unknown function; required for uptake of FAD into endoplasmic reticulum', Chr XVI from 133042-135423, Uncharacterized ORF
PROTEIN	739	YKL120W	0.9999	10	2	1	LGFYEPIR TGAGSSVQLPIYNTAK	YKL120W	OAC1 SGDID:S000001603,'Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, and thiosulfate; member of the mitochondrial carrier family', Chr XI from 216988-217962, Verified ORF
PROTEIN	740	YMR142C	1.0000	238	8	1	AAGLTAAYAR APEAEQVLSAAATFPIAQPATDVEAR DGKAPEAEQVLSAAATFPIAQPATDVEAR IAPRPLDLLR IAPRPLDLLRPVVR IIVFPR NQEIFDANVQR PLDLLRPVVR	YMR142C	RPL13B SGDID:S000004750,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential for viability; has similarity to rat L13 ribosomal protein', Chr XIII from 551206-551203,550800-550205, reverse complement, Verified ORF
PROTEIN	741	YDL040C	1.0000	10	4	1	FINCKTVKYFLR FIPLTFLQDKEELSK GLDLYSVGEKDDAASYVANAIR SVAAYPSDQDNDVFGEK	YDL040C	NAT1 SGDID:S000002198,'Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p); N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing', Chr IV from 381435-378871, reverse complement, Verified ORF
PROTEIN	742	YPL019C	1.0000	124	18	1	DFDNIQNFIVEEK ELPFNNSEEYSPLLYR FINNFIFK FPYSVMEIK FWVHDDNIMEVK HLPALVYASVPNENDDFVDNLESDVR ISYLYEFLR LANDVYPPWK LKELPFNNSEEYSPLLYR LLDKPDIFLEK LLDKPDIFLEKR LNFTGFIK LSHFSNLEDASFK NPENWHRDDIDSNIPNPLR TAFQIPGDQSIR TFTENTETGNSSFEEIR VINQDNSQMPNYEWIK VTIDSNIMYIR	YPL019C	VTC3 SGDID:S000005940,'Vacuolar membrane protein involved in vacuolar polyphosphate accumulation; functions as a regulator of vacuolar H+-ATPase activity and vacuolar transporter chaperones; involved in non-autophagic vacuolar fusion', Chr XVI from 517016-514509, reverse complement, Verified ORF
PROTEIN	743	YPL085W	1.0000	20	7	1	ASNITAANSLPLANLPLAENILPEIITHR IIESSAPPPPPIVK KQDIADQETAENLFTSSTEPSENKIR SFPGPLGSAKLKK SYSEETSEDIFHGHDK TGLGTPNQQVSVPNIVSPKPPVVK TSPSPTGPNPNNSPSPSSPISR	YPL085W	SEC16 SGDID:S000006006,'COPII vesicle coat protein required for ER transport vesicle budding and autophagosome formation; Sec16p is bound to the periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p', Chr XVI from 387064-393651, Verified ORF
PROTEIN	744	YJL130C	1.0000	355	47	1	AANSVSQDSSYTDFSFTIAGTAHNAHSVTQSASK AAYALGGLGSGFANNEK AGLLGVESIELTPHIISK AIMGLPLTPYPVEK AIMGLPLTPYPVEKLPDDYVAVK ATGYPLAYTAAK DELVEELPR DGTVLQGYSFGAEK EEGIYTILINPNIATIQTSKGLADK EELPSLVLR EIGFPVIVR ELFSNAIDEINEK ELTSMDEAESFAEK ELVAPGAIQNLIR EYGITPFVK FLDSNEVAIR ILGTSPDMIDSAENR ISSFGTKEELPSLVLR ITAVAELLNQWPTEK ITGPYNIQFIAK IVNVNPLVSSVK KAGLLGVESIELTPHIISK KTPVFGICLGHQLIAR KVLVLGSGGLSIGQAGEFDYSGSQAIK LAGADPVLGVEMASTGEVATFGHSK LAVDYSVPLVTNVK LGLNIPLNEVK LLIEAISR LTIDDIVLR MLDQIGVDQPAWK NDLESYLNQAVEVSR SAFDVPEWVDPNVQNLVSK SISGPVITDVASLK SLLATGFKLPK SQAANSVDEALAAVK TITLPGLINIATYVPNASHVIK VFAIANAFAK VGYPVLVRPSYVLSGAAMNTVYSK VLGTPIDTIITTEDR VLGTPIDTIITTEDRELFSNAIDEINEK VPQFSFPR VTALFLPLR VVGVNLIELATK VVYNGETLVLSGELVSPGAK VYFVPVTAEFVR WLQNEGIPAVYGVDTR YTQVLKPIAFPGGLLEDNVK	YJL130C	URA2 SGDID:S000003666,'Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP', Chr X from 172286-165642, reverse complement, Verified ORF
PROTEIN	745	YHR063C	0.9732	3	2	1	FTNALVVPLFR LPWTEEEMIQK	YHR063C	PAN5 SGDID:S000001105,'2-dehydropantoate 2-reductase, part of the pantothenic acid pathway, structurally homologous to E. coli panE', Chr VIII from 225171-224032, reverse complement, Verified ORF
PROTEIN	746	YGL049C	0.9992	3	2	1	AAEKAEEQAPKEEIAPLVPSANR EAPKPTGEANEVVIDGKSGASVK	YGL049C	TIF4632 SGDID:S000003017,'Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) that also contains eIF4E (Cdc33p); associates with the poly(A)-binding protein Pab1p, also interacts with eIF4A (Tif1p); homologous to Tif4631p', Chr VII from 409607-406863, reverse complement, Verified ORF
PROTEIN	747	YGR094W	1.0000	286	28	1	ASYPVYVSEYDDVK AYNPANVESSWYDWWIK DINLDILR EAFTLSPELTK EVEPIPEFIDK FIQHPFLPR ILVSLDDPALK ILVSLDDPALKAYNPANVESSWYDWWIK KIPIITDKEAVDMEFGTGAVK LDNTVAEIEGLEATIENLK LDNTVAEIEGLEATIENLKR LGDDYQPPATEGLSGNESLVEK LIIATTRPETIFGDTAVAVHPDDDR LIIATTRPETIFGDTAVAVHPDDDRYK LLQGNLDPR SANAYDLVLNITK SANAYDLVLNITKEAR SGDIIEPLLKPQWWVSQSEMAK SKLDNTVAEIEGLEATIENLKR SLGNVIDPLDVITGIK SLLSEYNILK TAEDQKDSIVSLIK TGEVIINPLKEDGSPK TGVFEPEFTADGK TLLSVPGYDEK TVLFLPGFDHAGIATQSVVEK VEFGVLTSFAYPVIGSDEK VFVESNHEEYFK	YGR094W	VAS1 SGDID:S000003326,'Mitochondrial and cytoplasmic valyl-tRNA synthetase', Chr VII from 672190-675504, Verified ORF
PROTEIN	748	YOL058W	0.9999	5	3	1	EVSVTKPLDVFLAASNLAR KAHVDLEGLTLDK LIVDPMDAPDQPQDLTIDFER	YOL058W	ARG1 SGDID:S000005419,'Arginosuccinate synthetase, catalyzes the formation of L-argininosuccinate from citrulline and L-aspartate in the arginine biosynthesis pathway; potential Cdc28p substrate', Chr XV from 219210-220472, Verified ORF
PROTEIN	749	YHR208W	1.0000	158	7	1	DKLDPQEWDINER ELVTAPLDGTILEGVTR GLGVGTPSEALLYVITSPVGPYYK QGELLEAFGSGTAAVVSPIK QVAQWIADIQYGR TPQNTITMFRPDK YYTITEVATR	YHR208W	BAT1 SGDID:S000001251,'Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed during logarithmic phase and repressed during stationary phase', Chr VIII from 517532-518713, Verified ORF
PROTEIN	750	YLR384C	0.9973	7	3	1	DFETPGNVLDVACSFSNEIYAAINK EGQLDSASEPVTGMEHQLSWKPQGSLIASIQR EYLPFLQELQDNEPLR	YLR384C	IKI3 SGDID:S000004376,'Subunit of RNA polymerase II elongator histone acetyltransferase complex, involved in maintaining its structural integrity; negatively regulates exocytosis independent of transcription, homolog of human familial dysautonomia (FD) protein', Chr XII from 892900-888851, reverse complement, Verified ORF
PROTEIN	751	YGR116W	1.0000	11	6	1	AGITDYGNMSSEDQELER AKLESLNLESYAEELEK ENLEVPFIYAYR ISLQDIYDLEDLKK LDKDLFQHIDIQELEKENPLALGK LESLNLESYAEELEK	YGR116W	SPT6 SGDID:S000003348,'Essential protein that interacts with histones and is involved in nucleosome disassembly and reassembly during transcription elongation', Chr VII from 720413-724768, Verified ORF
PROTEIN	752	YGL234W	1.0000	165	21	1	GDKITLDTDKLPPHTQIFQAGTK GLNTGGMGAYAPAPVATPSLLK GVIIPSSIDESVQAIK GVIIPSSIDESVQAIKDIMVTK HNIPTASYDVFTNPEEAISFLQAHTDK IFDGDKGLNTGGMGAYAPAPVATPSLLK INEMAAGDVLLGLASSGVHSNGFSLVR ITLDTDKLPPHTQIFQAGTK IYVAPGNGGTATMDPSR LLLGLAHITGGGLVENIPR QNEDTLLVGATDGVGTK RPGADSDIGGFGGLFDLAQAGFR SAVTVVVAAGGYPESYAK TIDSQIVKPTIDGMR TLGEGILEPTK TNQLVPEVLEYNVR VAITYADSGVSVDNGNNLVQTIK VDMSTWEVPR VINWDITPDVANFAR VLSVTSTAQDLR WFGQAGNVPHDDILR	YGL234W	ADE5,'Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway, contains aminoimidazole ribotide synthetase and glycinamide ribotide synthetase activities',7 SGDID:S000003203, Chr VII from 56482-58890, Verified ORF
PROTEIN	753	YPR108W	0.9876	2	2	1	SQEVEYVDPTVNR VYAQLLESYK	YPR108W	RPN7 SGDID:S000006312,'Essential, non-ATPase regulatory subunit of the 26S proteasome, similar to another S. cerevisiae regulatory subunit, Rpn5p, as well as to mammalian proteasome subunits', Chr XVI from 742452-743741, Verified ORF
PROTEIN	754	YDR385W	1.0000	963	34	2	ADLMLYVSK AEPIDEEVSLAIENGIINPR AEQLYEGPADDANCIAIKNCDPK AFNMFILDPIFR AGEIVLAAR ALLELQVSKEDLYQTFAR ATYAGFLLADPK AYLPVNESFGFTGELR DSVVAAFQWATK EDLYQTFAR EEVPGWQEYYDKL EGPIFGEEMR ETVESESSQTALSK FSVSPVVQVAVEVK FYAFGR GGGQIIPTMR GQVVSEEQRPGTPLFTVK GTVAFGSGLHGWAFTIR HGMKEEVPGWQEYYDKL IKPVVVINKVDR IMADDYGWDVTDAR IMADDYGWDVTDARK IQGPNYVPGK IQGPNYVPGKKDDLFIK ISPPVVAYR LEIVLKGDEKDLEGK LWGDSFFNPK QATGGQAFPQMVFDHWSTLGSDPLDPTSK RATYAGFLLADPK RGQVVSEEQRPGTPLFTVK STAISLYSEMSDEDVK STAISLYSEMSDEDVKEIK STLTDSLVQR TVESVNVIVSTYADEVLGDVQVYPAR	YDR385W,YOR133W	EFT2 SGDID:S000002793,'Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin', Chr IV from 1243222-1245750, Verified ORF
PROTEIN	755	YBR109C	1.0000	41	3	1	EVSDGSGEINIQQFAALLSK LTDAEVDDMLR SNDSEQELLEAFK	YBR109C	CMD1 SGDID:S000000313,'Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca++ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin', Chr II from 458356-457913, reverse complement, Verified ORF
PROTEIN	756	YDR381W	1.0000	22	4	1	EFFASQVGGVQR LNLIVDPNQRPVK SLEDLDKEMADYFEK SLEDLDKEMADYFEKK	YDR381W	YRA1 SGDID:S000002789,'Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucleus; member of the REF (RNA and export factor binding proteins) family; another family member, Yra2p, can substitute for Yra1p function', Chr IV from 1236550-1236834,1237601-1237996, Verified ORF
PROTEIN	757	YGR254W	1.0000	489	21	1	AADALLLK AAQDSFAAGWGVMVSHR DGKYDLDFKNPNSDK GNPTVEVELTTEK HLADLSK IATAIEK IEEELGDNAVFAGENFHHGDKL IGLDCASSEFFK IGSEVYHNLK IGSEVYHNLKSLTK KAADALLLK LGANAILGVSLAASR NVNDVIAPAFVK RYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK SGETEDTFIADLVVGLR SIVPSGASTGVHEALEMR TAGIQIVADDLTVTNPK TSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAK VNQIGTLSESIK WLTGPQLADLYHSLMK YGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK	YGR254W	ENO1 SGDID:S000003486,'Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression is repressed in response to glucose', Chr VII from 1000932-1002245, Verified ORF
PROTEIN	758	YGR159C	1.0000	114	10	1	ALDALQGEYIDNRPVR EESKESSSSDSSSSSSSDSESEK GFGYVQFSNMEDAK GFGYVQFSNMEDAKK GGAR GYGYVDFENK KALDALQGEYIDNRPVR KEFEHIGGVIGAR LSWSIDDEWLK NEETEEPATIFVGR	YGR159C	NSR1 SGDID:S000003391,'Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis', Chr VII from 807661-806417, reverse complement, Verified ORF
PROTEIN	759	YGL040C	1.0000	7	3	1	LKDYLKPLVAK MHTAEFLETEPTEISSVLAGGYNHPLLR SVILFGVPLIPGTKDPVGTAADDPAGPVIQGIK	YGL040C	HEM2 SGDID:S000003008,'Delta-aminolevulinate dehydratase, a homo-octameric enzyme, catalyzes the conversion of delta-aminolevulinic acid to porphobilinogen, the second step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus', Chr VII from 420561-419533, reverse complement, Verified ORF
PROTEIN	760	YOR259C	1.0000	33	4	1	ALQSIGQLIGEVMK IIMATNRPDTLDPALLRPGR MSDGFNGADIRNCATEAGFFAIRDDR TLMELLTQMDGFDNLGQTK	YOR259C	RPT4 SGDID:S000005785,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for spindle pole body duplication; localized mainly to the nucleus throughout the cell cycle', Chr XV from 813708-812395, reverse complement, Verified ORF
PROTEIN	761	YBL041W	1.0000	14	1	1	AGGAAASLIMPFLDNQVNFK	YBL041W	PRE7 SGDID:S000000137,'20S proteasome beta-type subunit', Chr II from 141250-141975, Verified ORF
PROTEIN	762	YGL030W	1.0000	101	6	1	KSELEYYAMLSK LIIIAANTPVLR SELEYYAMLSK TKVYYFQGGNNELGTAVGK VGVVSILEAGDSDILTTLA VYYFQGGNNELGTAVGK	YGL030W	RPL30 SGDID:S000002998,'Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein; involved in pre-rRNA processing in the nucleolus; autoregulates splicing of its transcript', Chr VII from 439096-439098,439329-439643, Verified ORF
PROTEIN	763	YJR139C	1.0000	144	8	1	AFSSDLATWK DFSPLNVGSDWK ISGVEVESPTSFPVQSLIPKPLESVK RYTNPVVIQGAGAGAAVTAAGVLGDVIK TLPLDDLIAHLK TSPKPVILVDNTSSAYIAGFYTK YDYSHPFASLK YTNPVVIQGAGAGAAVTAAGVLGDVIK	YJR139C	HOM6 SGDID:S000003900,'Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions', Chr X from 690440-689361, reverse complement, Verified ORF
PROTEIN	764	YOR096W	1.0000	163	10	1	AELRPLQFK ALAIFVPVPSLAGFHK HVIFLAER ILEDLVFPTEIVGK ILEDLVFPTEIVGKR ILSQAPTELELQVAQAFVELENSSPELK KALAIFVPVPSLAGFHK LESFQAVYNK QIVFEIPSETH VLLDSKDVQQIDYK	YOR096W	RPS7A SGDID:S000005622,'Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Bp; interacts with Kti11p; deletion causes hypersensitivity to zymocin; has similarity to rat S7 and Xenopus S8 ribosomal proteins', Chr XV from 505795-505938,506340-506768, Verified ORF
PROTEIN	765	YBR029C	1.0000	7	3	1	AIDKLQEELHKDASESVTPVTK ITVDTVLSTILMNLNDKQIIELIDILIRFLSK SLFKFFQATFYEYPVLNFIVTNHK	YBR029C	CDS1 SGDID:S000000233,'Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); an enzyme that catalyzes that conversion of CTP + phosphate into diphosphate + CDP-diaclglyerol, a critical step in the synthesis of all major yeast phospholipids', Chr II from 297742-296369, reverse complement, Verified ORF
PROTEIN	766	YER025W	1.0000	108	14	1	EFEEGGGLPEQPLNPDFSK FAVPGGLIGVGTK GTIADGAPIVPISAQLK KLEPNEVLMVNIGSTATGAR KREFEEGGGLPEQPLNPDFSK LGDEIEIRPGIVTK LIGWATIK LNPLSAEIINR QATINIGTIGHVAHGK SFDVNKPGAEIEDLK SFDVNKPGAEIEDLKGGVAGGSILNGVFK VAFTGLEEDGETEEEK VAFTGLEEDGETEEEKR YNIDAVNEFIVK	YER025W	GCD11 SGDID:S000000827,'Gamma subunit of the translation initiation factor eIF2, involved in the identification of the start codon; binds GTP when forming the ternary complex with GTP and tRNAi-Met', Chr V from 205250-206833, Verified ORF
PROTEIN	767	YGL011C	1.0000	8	5	1	DKFFTLSAENIEER LYQVEYAFK MANLSQIYTQR TDPAGYYVGYK VVEFAITHMIDALGTEFSK	YGL011C	SCL1 SGDID:S000002979,'Alpha subunit of the 20S core complex of the 26S proteasome involved in the degradation of ubiquitinated substrates; essential for growth; detected in the mitochondria', Chr VII from 475252-474494, reverse complement, Verified ORF
PROTEIN	768	YGL238W	0.9999	13	3	1	LAENEFLMR QLETQDGFGLTLLHVIASTNLPLSTR TDSSIFPDLVPVLGIFQR	YGL238W	CSE1 SGDID:S000003207,'Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p), homolog of metazoan CAS protein, required for accurate chromosome segregation', Chr VII from 49552-52434, Verified ORF
PROTEIN	769	SHUFF_YLL040C	0.9729	5	3	1	EPQEGNPIVLLMQLSQVTTQEK ILLSLLFQK KFKTNEANFSPNK	SHUFF_YLL040C	VPS13 SGDID:S000003963,'Protein of unknown function; heterooligomeric or homooligomeric complex; peripherally associated with membranes; homologous to human COH1; involved in sporulation, vacuolar protein sorting and protein-Golgi retention', Chr XII from 63644-54210, reverse complement, Verified ORF
PROTEIN	770	YER048C	1.0000	13	4	1	FQAVGEAYQVLSDPGLR MSEVNTDELDQYER SAYNLLSTGLEAQK YLIAVK	YER048C	CAJ1 SGDID:S000000850,'Nuclear type II J heat shock protein of the E. coli dnaJ family, contains a leucine zipper-like motif, binds to non-native substrates for presentation to Ssa3p, may function during protein translocation, assembly and disassembly', Chr V from 248156-246981, reverse complement, Verified ORF
PROTEIN	771	YLR321C	0.9994	3	2	1	AQAQDIGNAVLPDLQDQHHNPFNILR FATSIVQDLGLTR	YLR321C	SFH1 SGDID:S000004313,'Subunit of the RSC chromatin remodeling complex required for kinetochore function in chromosome segregation; essential gene required for cell cycle progression; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog', Chr XII from 777864-776584, reverse complement, Verified ORF
PROTEIN	772	YIL125W	1.0000	37	12	1	FGLEGLESVVPGIK FLQLANEDPR HAVLHDQQSEAIYTPLSTLNNEK HDLDKEINLGPGILPR IEIPEPYQYTVDQK IEQLHPFPFAQLR KPLALFFSK KPNESIFSEFK NNPVPPELTLDYYGFSK SGLVLSLPHGYDGQGPEHSSGR TLVDRSVELGVEDIVLGMAHRGR YVNLSLVANPSHLESQDPVVLGR	YIL125W	KGD1 SGDID:S000001387,'Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step in the tricarboxylic acid (TCA) cycle, the oxidative decarboxylation of alpha-ketoglutarate to form succinyl-CoA', Chr IX from 122689-125733, Verified ORF
PROTEIN	773	YOR270C	1.0000	56	13	1	AIFEILNK DMEVAVASASSSASS DSAYTLGQLGLVQFR ELDSWFQDVTR FILQSGDEFFLK ILIAEGWIPR ILIAEGWIPRDELATLQAR LGIDVPSIIQVLDTNHTPPTFHR LIQMEDATDQIEVQK LIQMEDATDQIEVQKNDLEQYR NLSDLYTVLK TTSTTLESELYAIAK TVEIEQPVYDVK	YOR270C	VPH1 SGDID:S000005796,'Subunit of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p); Vph1p is located in V-ATPase complexes of the vacuole while Stv1p is located in V-ATPase complexes of the Golgi and endosomes', Chr XV from 830573-828051, reverse complement, Verified ORF
PROTEIN	774	YLR304C	1.0000	144	16	1	AIDLNKEVYDFLASATAK DKDGNEFMLKPPHGDGLPQR EVAVANNWPLDVR FLGGFAIITK GHLENISNNYMIGAINAENKK IDILGLAELAPGKPVTMR ILYGHLDDPHGQDIQR INPDDRIDILGLAELAPGKPVTMR LQLLKPFKPWDGK MKEVAVANNWPLDVR QGLLPLNFK SMIEYLEATGR TIFTVTPGSEQIR TTTDHISMAGPWLK VNQNLLEDHSFINYK WVVIGDENFGEGSSR	YLR304C	ACO1 SGDID:S000004295,'Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy', Chr XII from 737550-735214, reverse complement, Verified ORF
PROTEIN	775	YFR053C	1.0000	62	11	1	DTLPLGFTFSYPASQNK ESGNYLAIDLGGTNLR GFDIPNVEGHDVVPLLQNEISK GFDIPNVEGHDVVPLLQNEISKR GGNIPMIPGWVMEFPTGK IEDDPFENLEDTDDIFQK INEGILQR LVLLELNEK MTSGYYLGELLR TGHIAADGSVYNKYPGFK TKYDVAVDEQSPRPGQQAFEK	YFR053C	HXK1 SGDID:S000001949,'Hexokinase isoenzyme 1, a cytosolic protein that catalyzes phosphorylation of glucose during glucose metabolism; expression is highest during growth on non-glucose carbon sources; glucose-induced repression involves the hexokinase Hxk2p', Chr VI from 255036-253579, reverse complement, Verified ORF
PROTEIN	776	YNL110C	0.9920	8	3	1	DEDEIEGLAASDDEQSGTHK TLEEYSGIIYVSR YFAQFGDLK	YNL110C	NOP15 SGDID:S000005054,'Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm', Chr XIV from 418490-417828, reverse complement, Verified ORF
PROTEIN	777	YLR087C	0.9057	2	5	1	DWFFRFHGEALDVNFVPSFMDVIESTLQSMRAFQELK FTPSVMILSYESGKGIIDVLPPK GVLPDLLQVSFSSDEIILSSTALVVANILDIYNTIVR ISVECEGLEIFIYNR VYTYEDIETKSEPSFEIK	YLR087C	CSF1 SGDID:S000004077,'Protein required for fermentation at low temperature', Chr XII from 315732-306856, reverse complement, Verified ORF
PROTEIN	778	YAL012W	1.0000	227	10	1	AIHAGEHVDVHGSVIEPISLSTTFK DALGGGMISFR EASGVFDDLVR IAEFLAADKENVVAVNYPGLK ISVGIEDTDDLLEDIK ISVGIEDTDDLLEDIKQALK LVWIETPTNPTLK QSSPANPIGTYEYSR VANAHGVETSFTNDLLNDLPQLIK VANAHGVETSFTNDLLNDLPQLIKENTK	YAL012W	CYS3 SGDID:S000000010,'Cystathionine gamma-lyase, catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine;', Chr I from 130802-131986, Verified ORF
PROTEIN	779	YCL035C	1.0000	12	3	1	DLIAENEIFVASK ETGELEELLEPILAN VLVLQLNDMK	YCL035C	GRX1 SGDID:S000000540,'Hydroperoxide and superoxide-radical responsive heat-stable glutathione-dependent disulfide oxidoreductase with active site cysteine pair; protects cells from oxidative damage', Chr III from 61173-60841, reverse complement, Verified ORF
PROTEIN	780	YOL092W	0.9448	5	1	1	IDEEMAAPSSDGNAGDDNLR	YOL092W	YOL092W SGDID:S000005452,'Hypothetical protein', Chr XV from 144204-145130, Uncharacterized ORF
PROTEIN	781	YMR205C	1.0000	279	20	1	AAEENFNADDKTISDTAAVVGVK AFVVEVMGR AFVVMEGYEGLVR AIAVMTSGGDAPGMNSNVR DMLGWQSR DTEFIEHLNNFMAINSADHNEPK EFHWEDVR FDAKPAYPGHVQQGGLPSPIDR ILATLQGLEAVNAVLESTPDTPSPLIAVNENK LAEVITAEADGR LAEVITAEADGRFDAKPAYPGHVQQGGLPSPIDR NAVSTKPTPPPAPEASAESGLSSK PAYPGHVQQGGLPSPIDR QLYDYETEVSMR SEWPSLIEELLK SHATQSLVFNTSDILAVK SSPDENSTLLSNDSISLK TTDTYPSLPKPLNRPQK TTIVVVAEGAIAADLTPISPSDVHK VTPEEADLGMIAYYFQK	YMR205C	PFK2 SGDID:S000004818,'Beta subunit of heterooctameric phosphofructokinase involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes', Chr XIII from 674765-671886, reverse complement, Verified ORF
PROTEIN	782	YNL131W	1.0000	8	4	1	IVALKDIVPPGKR QTISNFFGFTSSFVR TFDLQSDANNILAQGEK TFDLQSDANNILAQGEKDAAATAN	YNL131W	TOM22 SGDID:S000005075,'Component of the TOM (translocase of outer membrane) complex responsible for initial import of mitochondrially directed proteins; acts as a receptor for precursor proteins and mediates interaction between the TOM and TIM complexes', Chr XIV from 378769-379227, Verified ORF
PROTEIN	783	YMR215W	1.0000	13	4	1	ADPSGTYDSLYLSR FIKPSSATNSESDNEVFFVK NYPNVLGFFSGNEVINDQSDYAK SIPVGYSAADNTDLR	YMR215W	GAS3 SGDID:S000004828,'Putative 1,3-beta-glucanosyltransferase, has similarity to Gas1p; localizes to the cell wall', Chr XIII from 696795-698369, Verified ORF
PROTEIN	784	YEL047C	1.0000	34	9	1	GLGGILLNPITGR LANDSPLAIEWLK LDLLAQLGGHSVAR LGADLIDMDQIQVHPTGFIDPNDR LPPGFEIVSALSNNLK SSGKLPPGFEIVSALSNNLK SSGKLPPGFEIVSALSNNLKK VCPQEDNR YNIPVTILEK	YEL047C	YEL047C SGDID:S000000773,'Fumurate ReDuctase Soluble', Chr V from 66797-65385, reverse complement, Uncharacterized ORF
PROTEIN	785	YKL016C	0.9994	3	2	1	ELKDLQSTLDNIQSARPFDELTVDDLTK RQLLELQSQPTEVDFSHYR	YKL016C	ATP7 SGDID:S000001499,'Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr XI from 407632-407108, reverse complement, Verified ORF
PROTEIN	786	SHUFF_YNL267W	0.8963	1	2	1	NTDHMEADDAAR RVSHENVLSLVWSR	SHUFF_YNL267W	PIK1 SGDID:S000005211,'Phosphatidylinositol 4-kinase; catalyzes first step in the biosynthesis of phosphatidylinositol-4,5-biphosphate; may control cytokineses through the actin cytoskeleton', Chr XIV from 140879-144079, Verified ORF
PROTEIN	787	YEL058W	0.9999	3	3	1	KLLNPVGLQDKIDLVVAK NVQFSYGTAGFR QLELAHLEHSLK	YEL058W	PCM1 SGDID:S000000784,'Essential N-acetylglucosamine-phosphate mutase, a hexosephosphate mutase involved in the biosynthesis of chitin', Chr V from 43252-44925, Verified ORF
PROTEIN	788	YJL121C	1.0000	22	4	1	AGANVIVAGTSVFTAADPHDVISFMK AKFPHLNIQVDGGLGK AKFPHLNIQVDGGLGKETIPK FMEDMMPK	YJL121C	RPE1 SGDID:S000003657,'D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress', Chr X from 191011-190295, reverse complement, Verified ORF
PROTEIN	789	YPL212C	1.0000	12	2	1	APALGLLLEAPVFEGYNK ASTSQYLGAHNFHNFTLGK	YPL212C	PUS1 SGDID:S000006133,'tRNA:pseudouridine synthase, introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA; nuclear protein that appears to be involved in tRNA export; also acts on U2 snRNA', Chr XVI from 153148-151514, reverse complement, Verified ORF
PROTEIN	790	YOL077C	1.0000	16	2	1	ENVLAADPLSNDALFK HLIQDLSGLLPHSR	YOL077C	BRX1 SGDID:S000005437,'Nucleolar protein, constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif', Chr XV from 186723-185848, reverse complement, Verified ORF
PROTEIN	791	YER090W	1.0000	72	10	1	FSHVQHLVSQVSGVLRPEK GATTEEDDALADQLR LNQTFESNVGKEGYENHVSTLK LNQTFESNVGKEGYENHVSTLKK LTDDSSPIPYPEQPPIK PTSLHPFNIYR SIFPAGTVSGAPK TGPTEGIETDPLEILEK VARPTSLHPFNIYR YSFIGISPR	YER090W	TRP2 SGDID:S000000892,'Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p', Chr V from 337945-339468, Verified ORF
PROTEIN	792	YLR380W	1.0000	11	4	1	ATIQGYDNDMRPVILVRPR FIQPQYIPR LQSSDHTQDSSEAAEAAHLYEK YLGGENDNDLDHYTPPDGSLDVHLK	YLR380W	CSR1 SGDID:S000004372,'Phosphatidylinositol transfer protein with a potential role in lipid turnover; interacts specifically with thioredoxin peroxidase (Tsa2p) and may have a role in oxidative stress resistance', Chr XII from 878282-879508, Verified ORF
PROTEIN	793	YMR303C	0.9962	3	7	1	AGHWAAISGAAGGLGSLAVQYAK EALDFFAR IGDYAGIK LPLVGGHEGAGVVVGMGENVK SISIVGSYVGNR VVGLSSLPEIYEK YVVDTSK	YMR303C	ADH2 SGDID:S000004918,'Glucose-repressible alcohol dehydrogenase II, catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1', Chr XIII from 874336-873290, reverse complement, Verified ORF
PROTEIN	794	YDL130W	0.9845	77	1	1	AAGANVDNVWADVYAK	YDL130W	RPP1B SGDID:S000002288,'Ribosomal protein P1 beta, component of the ribosomal stalk, which is involved in interaction of translational elongation factors with ribosome; accumulation is regulated by phosphorylation and interaction with the P2 stalk component', Chr IV from 229906-230019,230321-230527, Verified ORF
PROTEIN	795	YOL145C	0.9985	5	4	1	SWQRALQLNPK TRPHILNLLGR VEGYPSMEWPTSLDIPLK YNSHDAYALISLANLYVTIAR	YOL145C	CTR9 SGDID:S000005505,'Component of the Paf1p complex, which is a large complex that binds to and modulates the activity of RNA polymerase II and is required for expression of a subset of genes, including cyclin genes; contains TPR repeats', Chr XV from 52787-49554, reverse complement, Verified ORF
PROTEIN	796	YKR065C	0.9635	1	1	1	VDASSQSFSNPVPDYYGEK	YKR065C	PAM17 SGDID:S000001773,'Presequence translocase-associated motor subunit, required for stable complex formation between cochaperones Pam16p and Pam18p, promotes association of Pam16p-Pam18p with the presequence translocase', Chr XI from 565534-564941, reverse complement, Verified ORF
PROTEIN	797	YER023W	0.9903	3	2	1	AADETAAAFYPSK EQKPLVNELISQVGK	YER023W	PRO3 SGDID:S000000825,'Delta 1-pyrroline-5-carboxylate reductase, catalyzes the last step in proline biosynthesis', Chr V from 201075-201935, Verified ORF
PROTEIN	798	YJL055W	0.9935	3	3	1	ALYSESAEELGALFHK LLEFLKHSIQERFISVK LVYGGGTTGLMGK	YJL055W	YJL055W SGDID:S000003591,'Putative protein of unknown function; deletion mutants are sensitive to purine base analogs, 6-hydroxylaminopurine (HAP) and 2-amino-6-hydroxylaminopurine (AHA) and are AHA-hypermutable', Chr X from 333274-334011, Uncharacterized ORF
PROTEIN	799	YJL136C	1.0000	83	5	1	ADDHASVQINVAK AIPGEYITYALSGYVR GQLVELYVPR LAQNDGLLK NVWSYSR	YJL136C	RPS21B SGDID:S000003672,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps21Bp and has similarity to rat S21 ribosomal protein', Chr X from 157192-157169,156708-156469, reverse complement, Verified ORF
PROTEIN	800	YKR025W	0.9362	4	2	1	AEDDTGEEEEDDPVIEEFPLK ISGEEESLHVFQYANRPR	YKR025W	RPC37 SGDID:S000001733,'RNA polymerase III subunit C37', Chr XI from 487413-488261, Verified ORF
PROTEIN	801	SHUFF_YBR182C	0.9367	7	2	1	NPLINTGYHLCSAPVNSLSGFGR SPNHSMSNNFNTGSPDATVDQTAAR	SHUFF_YBR182C	SMP1 SGDID:S000000386,'Putative transcription factor involved in regulating the response to osmotic stress; member of the MADS-box family of transcription factors', Chr II from 594859-593501, reverse complement, Verified ORF
PROTEIN	802	YBR031W	1.0000	515	13	1	FVIWTEAAFTK GPLVVYAEDNGIVK IINSSEIQSAIRPAGQATQK IINSSEIQSAIRPAGQATQKR IPEIPLVVSTDLESIQK LDQVWGSETVASSK NVPGVETANVASLNLLQLAPGAHLGR PQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNK RGPLVVYAEDNGIVK TGTKPAAVFTETLK TGTKPAAVFTETLKHD VGYTLPSHIISTSDVTR YATASAIAATAVASLVLAR	YBR031W	RPL4A SGDID:S000000235,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Bp and has similarity to E. coli L4 and rat L4 ribosomal proteins', Chr II from 300166-301254, Verified ORF
PROTEIN	803	YER094C	1.0000	33	3	1	AIEPETFTQLVSSSLYER FGPYFVGPVVAGINSK RFGPYFVGPVVAGINSK	YER094C	PUP3 SGDID:S000000896,'Beta subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is subunit C10', Chr V from 349342-348725, reverse complement, Verified ORF
PROTEIN	804	YDR447C	1.0000	222	5	2	DQYVPEVSALDLSR IAGYTTHLMK KDQYVPEVSALDLSR LPLSVINVSAQR SNGVLNVDNQTSDLVK	YML024W,YDR447C	RPS17B SGDID:S000002855,'Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Ap and has similarity to rat S17 ribosomal protein', Chr IV from 1355545-1355543,1355228-1354821, reverse complement, Verified ORF
PROTEIN	805	YIL016W	0.9620	7	1	1	APVPLTLEEQIDNVSLR	YIL016W	SNL1 SGDID:S000001278,'Protein of unknown function proposed to be involved in nuclear pore complex biogenesis and maintenance as well as protein folding; has similarity to the mammalian BAG-1 protein', Chr IX from 321452-321931, Verified ORF
PROTEIN	806	YOL143C	1.0000	17	2	1	AGIDEAHSMHNHGEDWGAAAVEMAVK LGKPLDVVIPIGVLIK	YOL143C	RIB4 SGDID:S000005503,'Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, also known as DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin', Chr XV from 55103-54594, reverse complement, Verified ORF
PROTEIN	807	SHUFF_YHR199C	0.9845	1	1	1	FDGSDAGASCSLGQEPDK	SHUFF_YHR199C	YHR199C SGDID:S000001242,'The authentic, non-tagged protein was localized to the mitochondria', Chr VIII from 498422-497490, reverse complement, Uncharacterized ORF
PROTEIN	808	SHUFF_YNL014W	0.9905	3	4	1	GVVGLFDVSKANTTPQLELGSESDFIYR IIARVEEEGLVALLRALNGTNEILR PTYKVLTAHPLTYTEQVHLEVKNGSR VLILAAILVVLNTRFAEFRAK	SHUFF_YNL014W	HEF3 SGDID:S000004959,'Translational elongation factor EF-3; paralog of YEF3 and member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells', Chr XIV from 606320-609454, Verified ORF
PROTEIN	809	YHR052W	1.0000	24	3	1	EFSLTTLTNNIK GLMEIANPSELGSIFSK SPVLPLYYNQDVLDELEAK	YHR052W	CIC1 SGDID:S000001094,'Essential protein that interacts with proteasome components and has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles', Chr VIII from 210842-211972, Verified ORF
PROTEIN	810	YLR113W	1.0000	15	4	1	FVTSLPHRDPIPFSER IQDPQMTGYVSTR ITAADALAHPYSAPYHDPTDEPVADAK TVEPDAVDLLEK	YLR113W	HOG1 SGDID:S000004103,'Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors; mediates the recruitment and activation of RNA Pol II at Hot1p-dependent promoters; localization regulated by Ptp2p and Ptp3p', Chr XII from 371621-372928, Verified ORF
PROTEIN	811	YKR057W	1.0000	47	5	1	ADDHASVQINVAK AIPGEYVTYALSGYVR GQLVELYVPR LAQNDGLLK NVWSYSR	YKR057W	RPS21A SGDID:S000001765,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps21Bp and has similarity to rat S21 ribosomal protein', Chr XI from 551299-551322,551645-551884, Verified ORF
PROTEIN	812	YNR001C	1.0000	32	7	1	AIGVLPQLIIDR ANQEVLEWLFK GLVWEGSVLDPEEGIR LVSTIYEVAPGVLTK SEIPEHVIQLLDSLPK TVIGEVLLEQAYGGMR YLWDTLNAGR	YNR001C	CIT1 SGDID:S000005284,'Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate; the rate-limiting enzyme of the TCA cycle; nuclear encoded mitochondrial protein', Chr XIV from 631063-629624, reverse complement, Verified ORF
PROTEIN	813	YIL116W	0.9914	5	2	1	APYNISSLASEYALK YPDPHQLEFK	YIL116W	HIS5 SGDID:S000001378,'Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis; responsive to general control of amino acid biosynthesis; mutations cause histidine auxotrophy and sensitivity to Cu, Co, and Ni salts', Chr IX from 142925-144082, Verified ORF
PROTEIN	814	SHUFF_YNL023C	0.9890	8	3	1	FNCLFCQISTCICWCVHVYDTCSTFTTNYSCSPK QVSSTHESKECDDCENPK TENEVPDIKCICVR	SHUFF_YNL023C	FAP1 SGDID:S000004968,'Protein that binds to Fpr1p (FKBP12), conferring rapamycin resistance by competing with rapamycin for Fpr1p binding; has similarity to putative transcription factors, including D. melanogaster shuttle craft and human NFX1', Chr XIV from 591161-588264, reverse complement, Verified ORF
PROTEIN	815	SHUFF_YGR033C	0.9769	5	3	1	IGGDPPDNHK LLIWVRNQVITTISAESRLIAPLLSIGR NQVITTISAESRLIAPLLSIGRLR	SHUFF_YGR033C	TIM21 SGDID:S000003265,'Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex); may regulate protein import by binding to both the translocase of the outer membrane (TOM) and presequence-associated motor (PAM) complexes', Chr VII from 554971-554252, reverse complement, Verified ORF
PROTEIN	816	YHR047C	1.0000	25	7	1	FGQFAANLAAR GFDQTLAQALDTIR IFNIYQNPVSSEEK SSHPIEVPVNNADEINQIFDAISYSK SSHPIEVPVNNADEINQIFDAISYSKGSSLLR VWEQYVTDNLQR WLGEETFIK	YHR047C	AAP1 SGDID:S000001089,'Arginine/alanine aminopeptidase, overproduction stimulates glycogen accumulation', Chr VIII from 201303-198733, reverse complement, Verified ORF
PROTEIN	817	YAL035W	1.0000	37	8	1	EASASAEGAEAIEGDFMSTLK GPMIIGVDVLEGTLR HVDENDTLYSLVSR IQLELAEQGLNSELYFQNK LEDPSGQQPIWGR QTNVQGGEAGGITQQIGATYFPIDAIK VISLEINHQPVQEVK VVEGFGTTIDVILSNGYLREGDRIVLCGMNGPIVTNIR	YAL035W	FUN12 SGDID:S000000033,'GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2', Chr I from 76428-79436, Verified ORF
PROTEIN	818	YBR080C	0.9997	6	4	1	FEDLGVGGLDKEFTK FSNNILQMLK LISPNELSGMSESAK TWGGWSLNQDVQAK	YBR080C	SEC18 SGDID:S000000284,'ATPase required for the release of Sec17p during the 'priming' step in homotypic vacuole fusion and for ER to Golgi transport; homolog of the mammalian NSF', Chr II from 400884-398608, reverse complement, Verified ORF
PROTEIN	819	YOR243C	0.9352	5	2	1	NQLVEIFGEEDVLK QCLAENALLYSLSNQR	YOR243C	PUS7 SGDID:S000005769,'Pseudouridine synthase, catalyzes pseudouridylation at position 35 in U2 snRNA, position 13 in cytoplasmic tRNAs, and position 35 in pre-tRNA(Tyr); Asp(256) mutation abolishes activity; conserved in archaea, some bacteria, and vertebrates', Chr XV from 792242-790212, reverse complement, Verified ORF
PROTEIN	820	YNL207W	1.0000	3	3	1	IIEALSSGVENLK SHEVVPTPLIHQISGMR YEPKPDSSMLDTEGFGDGYK	YNL207W	RIO2 SGDID:S000005151,'Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA; has similarity to Rio1p', Chr XIV from 255354-256631, Verified ORF
PROTEIN	821	YER110C	1.0000	310	27	1	ALAAEDDEATREIIDR ALYELLSAADQK ANTFENISTMAR EHFLPYVEQSLK ESGYAFIANLAK ESGYAFIANLAKVYGENFAPFLKTILPEIFK ETALNTIWNVVK EVASAALSELALGTK FAASIPSVVNVLDAVIK GIPASSYVNADVLAVIQAAR IIEIFSAVFTK LGPEITVAALK LRCAVVSAIGSAAFAAGSAFIPYFK LRESGYAFIANLAK LYQENSPVITNETPR SDAFAEFAEPLVNSAYEAIK SLSAQALNHVSALIEEQETINPVQAQK SSAVGAASELALGMK SSAVGAASELALGMKEQNPFVHEMLEALVIR TILPEIFK TLQTQFYTQPTTLPALIHILQNGSDDSLK TSLLQTAFSEPK VFDNFRPVVFGLFQSK VIASIGTEELDGNKWPDLVPNLIQTASGEDVQTR VLNEQVDESYGLR VYGENFAPFLK YLNTTYNGIVAQNPVLAAVIA	YER110C	KAP123 SGDID:S000000912,'Karyopherin beta, mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1', Chr V from 382099-378758, reverse complement, Verified ORF
PROTEIN	822	YMR120C	1.0000	120	14	1	AFEHTADYDAAISDFFR DAGFPIEDVSAITHAPEMLGGR ELSASLNLPAAASFK EVSDGVIAPGYEPEALAILSK FEEIPKPFTPEER HVSPAGAAVGIPLSDVEK LTNVSLSSDAFFPFPDNVYR MSSFGDWIALSNIVDVPTAK PAQAYVSQQDSLPFK SNAIDLFVTGQIPTEEPELSEYQSK TGLLDLAR VGVTIPEAVEEIDIGGVTLLR YGANPHQKPAQAYVSQQDSLPFK YIAAPSGSVMDK	YMR120C	ADE17 SGDID:S000004727,'Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities, isozyme of Ade16p; ade16 ade17 mutants require adenine and histidine', Chr XIII from 509279-507501, reverse complement, Verified ORF
PROTEIN	823	YDR322C-A	0.9998	3	2	1	DVPANASFNLEDPNIDFER VILNAVESLK	YDR322C-A	TIM11 SGDID:S000007255,'Subunit e of mitochondrial F1F0-ATPase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; essential for the dimeric state of ATP synthase', Chr IV from 1112290-1112000, reverse complement, Verified ORF
PROTEIN	824	YML070W	1.0000	29	7	1	ASYVGDSSQVEDPGAVGLCEFLK GFALANPSITLVPEEK IALISGGGSGHEPTHAGFIGK IVGAFAEEYSSK NYTGDVLHFGLSAER SFEVTDPVNSSLK TSAPSVNDDLLHNEVTAK	YML070W	DAK1 SGDID:S000004535,'Dihydroxyacetone kinase, required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation', Chr XIII from 133475-135229, Verified ORF
PROTEIN	825	YNL054W-B	0.9999	16	19	1	AVSPTDSTPPSTHTEDSKRVSK FLQNSNLGGIIPTVNGKPVR KNIADVMTKPLPIK KYVRPPPMLTSPNDFLNWVK LDQFNYDALTFDEDLNR LSAPGQPGLYIDQDELEIDEDEYKEK LTESTVNHTNHSDDELPGHLLLDSGASR LVAISDASYGNQPYYK NIADVMTKPLPIK NIPINAIGDLQFHFQDNTK QHAGLAGLDISTLLPFGQPVIVNDHNPNSK QTNSSLGGIGDSNAYTTINSK SAPSYFISFTDETTK SPSIDTSSSESNSLHHVVPIKTSDTCPK STTEPIQLNNKHDLHLGQK TVDTTNYVILQGK YLLPSNISVPTINNVHTSESTR YQNSYEPFQYLHTDIFGPVHNLPK YVRPPPMLTSPNDFLNWVK	YNL054W-B	YNL054W-B SGDID:S000007385,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr XIV from 519457-520761,520763-524707, pseudogene
PROTEIN	826	SHUFF_YLR381W	0.9825	2	1	1	CNLNANGEFFESEHNR	SHUFF_YLR381W	CTF3 SGDID:S000004373,'Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p; may bind the kinetochore to spindle microtubules', Chr XII from 879723-881924, Verified ORF
PROTEIN	827	YDR190C	1.0000	8	6	1	ALESNIAPVVVLASNR EIVQDVTLHDLDVANAR LQVESSALDLLATMGTETSLR SDAYATEFDLETEEYVPLPK TALALAISQELGPK VEGGFVGQIEAREACGVIVDLIKAK	YDR190C	RVB1 SGDID:S000002598,'Essential protein involved in transcription regulation; component of chromatin remodeling complexes; required for assembly and function of the INO80 complex; member of the RUVB-like protein family', Chr IV from 841992-840601, reverse complement, Verified ORF
PROTEIN	828	YBL039C	1.0000	60	10	1	DSHSAEFYPDIDEK KDSHSAEFYPDIDEK LGLRPTFFQNETEWSQIKK MVDELENNGLIFVGK NHPYYIATQYHPEYTSK NHVVVFMPEIDKETMGGSMR TVQIVPHLTNAIQDWIER WVEATDLEPEAQESNK YDLEAGENKFNF YVVVSGGVISGIGK	YBL039C	URA7 SGDID:S000000135,'Major CTP synthase isozyme (see also URA8), catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis', Chr II from 145731-143992, reverse complement, Verified ORF
PROTEIN	829	YLR432W	1.0000	111	14	1	DIQFVEDNSLLVQDVMTK EQAANLIAAGADGLR ETFPDLEIIAGNVATR FGFSGFPVTEDGK FGFSGFPVTEDGKR LDGLSVQELMDSK LLIVDDNGNLVSMLSR LRLLVEAGLDVVILDSSQGNSIFQLNMIKWIK NPVTGAQGITLSEGNEILK NPVTGAQGITLSEGNEILKK TASAQLEGGVHNLHSYEK YFSESDSVLVAQGVSGAVVDK YFSESDSVLVAQGVSGAVVDKGSIK YFSESDSVLVAQGVSGAVVDKGSIKK	YLR432W	IMD3 SGDID:S000004424,'Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-gene family in S. cerevisiae, constitutively expressed', Chr XII from 1002554-1004125, Verified ORF
PROTEIN	830	YOL021C	0.9519	3	1	1	FILSDSPLELSAPIGK	YOL021C	DIS3 SGDID:S000005381,'Nucleolar exosome component, involved in rRNA processing and RNA degradation, binds Gsp1p/Ran and enhances the GEF activity of Srm1p, implicated in mitotic control, homologous to the E. coli RNase R of the RNase II family', Chr XV from 285427-282422, reverse complement, Verified ORF
PROTEIN	831	YLR325C	1.0000	47	3	1	GSSSLYTLVINDAGK LIQSLPPTLK VRGSSSLYTLVINDAGK	YLR325C	RPL38 SGDID:S000004317,'Protein component of the large (60S) ribosomal subunit, has similarity to rat L38 ribosomal protein', Chr XII from 781379-781143, reverse complement, Verified ORF
PROTEIN	832	YNL248C	1.0000	9	4	1	FTVIKPGQFGR LNSPPEILVDGILSR NRIDSDKLTDSAIDIVDSVR SVSEIEIESVQDQPSVAVGSFFK	YNL248C	RPA49 SGDID:S000005192,'RNA polymerase I subunit A49', Chr XIV from 182609-181362, reverse complement, Verified ORF
PROTEIN	833	YGL103W	1.0000	180	10	1	ETAPVIDTLAAGYGK GRIPNVPVIVK INMDKYHPGYFGK IPNVPVIVK LWTLIPEDK LWTLIPEDKR LWTLIPEDKRDQYLK PVLNLDK QQAHFWKPVLNLDK SASKETAPVIDTLAAGYGK	YGL103W	RPL28 SGDID:S000003071,'Ribosomal protein L29 of the large (60S) ribosomal subunit, has similarity to E. coli L15 and rat L27a ribosomal proteins; may have peptidyl transferase activity; can mutate to cycloheximide resistance', Chr VII from 310970-311018,311530-311930, Verified ORF
PROTEIN	834	YNL007C	1.0000	100	8	1	DGDDLIYTLPLSFK EISEAFEILNDPQKR EIYDQYGLEAAR LYDLLGVSPSANEQELK LYDLLGVSPSANEQELKK TQIDIQLKPGWK VQPVQPSQTSTYPGQGMPTPK YKVDYPISLNDAQK	YNL007C	SIS1 SGDID:S000004952,'Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p; not functionally redundant with Ydj1p due to due to substrate specificity; shares similarity with bacterial DnaJ proteins', Chr XIV from 619567-618509, reverse complement, Verified ORF
PROTEIN	835	YDL131W	0.9998	8	14	1	AILANPSTYEILDPHDFGMK AILANPSTYEILDPHDFGMKR ALDDFGVDYIELTSPVASEQSR EGEQFANAFFDTEK LIDVSVLGIGER MIVAAPDYVR NFQLIDSTLR QVYELIRTLKSVVSCDIECHFHNDTGCAIANAYTALEGGAR SDLVDLLNIYK SRVDQLNLNLTDDQIKEVTAK SVVSCDIECHFHNDTGCAIANAYTALEGGAR VAVETGVDGVDVVIGTSK VDQLNLNLTDDQIK VDQLNLNLTDDQIKEVTAK	YDL131W	LYS21 SGDID:S000002289,'Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, which is the first step in the lysine biosynthesis pathway; highly similar to the other isozyme, Lys20p', Chr IV from 227393-228715, Verified ORF
PROTEIN	836	YDR432W	1.0000	47	3	1	DFDGTGALEFPSEEILVEALER ENSLETTFSSVNTR SFANQPLEVVYSK	YDR432W	NPL3 SGDID:S000002840,'RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm; phosphorylation by Sky1p in the cytoplasm may promote release of mRNAs', Chr IV from 1328775-1330019, Verified ORF
PROTEIN	837	YGR167W	0.9665	13	2	1	ALQLINQDDADIIGGR TEQDDILETEASPAKDDDEIR	YGR167W	CLC1 SGDID:S000003399,'Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; thought to regulate clathrin function, two Clathrin heavy chains (CHC1) form the clathrin triskelion structural component', Chr VII from 832461-833162, Verified ORF
PROTEIN	838	YBR127C	1.0000	251	16	1	AIVQVFEGTSGIDVK AVVGEEALSIEDK GIYPPINVLPSLSR GYPGYMYTDLSTIYER HVLTILTDMSSYADALR ILDEFYDR IPVSEDMLGR IYPEEMISTGVSAIDTMNSIAR LALTTAEYLAYQTER LNYNTVSGVNGPLVILEK LSLEFLEK TFITQGAYEDR TSLFLNLANDPTIER TVFESLDQAWSLLR VFAEDYLDINGSPINPYAR YNEIVNLTLPDGTVR	YBR127C	VMA2 SGDID:S000000331,'Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; contains nucleotide binding sites; also detected in the cytoplasm', Chr II from 492816-491263, reverse complement, Verified ORF
PROTEIN	839	YBR017C	0.9574	2	4	1	EAGNGEDADDNEDDDDDDDDEDGDVDTQWNLRK FISNPNFSPVIR IINLTSTEVTMSNDTIHK IMLECLQDPVHEVR	YBR017C	KAP104 SGDID:S000000221,'Transportin, cytosolic karyopherin beta 2 involved in delivery of heterogeneous nuclear ribonucleoproteins to the nucleoplasm, binds rg-nuclear localization signals on Nab2p and Hrp1p, plays a role in cell-cycle progression', Chr II from 273703-270947, reverse complement, Verified ORF
PROTEIN	840	YHL039W	0.9999	12	3	1	SVLEGIDQLTSVVSQRLLFYKNFK TNLNEGFLYPIVDLLNHK VPETLLITSQQALSEFSQAANER	YHL039W	YHL039W SGDID:S000001031,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm', Chr VIII from 21780-23537, Uncharacterized ORF
PROTEIN	841	YAL021C	0.9999	4	2	1	FIGFPNDKFPSDHIPLLAR LSQYSIDEDDDIENR	YAL021C	CCR4 SGDID:S000000019,'Component of the CCR4-NOT transcriptional complex, which is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening', Chr I from 113360-110847, reverse complement, Verified ORF
PROTEIN	842	YDR189W	1.0000	16	6	1	LQGGVGSLISGIK NLLEDLAQQVSITGK SPLPDVPAIYFVSPTK TIPITNVVDAIMDPLNSSQK VLILDIKSTATISSVLR VMYGSTAITTPAEFLNEISR	YDR189W	SLY1 SGDID:S000002597,'Hydrophilic protein involved in vesicle trafficking between the ER and Golgi; SM (Sec1/Munc-18) family protein that binds the tSNARE Sed5p and stimulates its assembly into a trans-SNARE membrane-protein complex', Chr IV from 838389-840389, Verified ORF
PROTEIN	843	YLR106C	1.0000	11	9	1	ALEPIIQAIGESLDIASSR DITDLLSIIDK EDEENGPEEQAMSDEEELK FLELHFDDIPQDELEIILR LINTISDDDAPQSPR LKLPTLKQHFYEDPNLEASK PILLEGSPGVGK RFPVLIQGPTSSGK TFLINELSK	YLR106C	MDN1 SGDID:S000004096,'Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP-dependent remodeling of 60S subunits and subsequent export from nucleoplasm to cytoplasm', Chr XII from 363739-349007, reverse complement, Verified ORF
PROTEIN	844	YPR133W-A	0.9459	11	1	1	MFGLPQQEVSEEEKR	YPR133W-A	TOM5 SGDID:S000006433,'Small mitochondrial outer membrane protein crucial to a binding relay for the import of proteins into mitochondria; subunit on the outer mouth of the TOM channel that accepts precursors from the receptors Tom20p and Tom22p', Chr XVI from 797553-797705, Verified ORF
PROTEIN	845	YIL021W	0.9999	4	2	1	DNVDFILSNVDLAMANSLR LGLIPLQSMDIEQLEYSR	YIL021W	RPB3 SGDID:S000001283,'RNA polymerase II third largest subunit B44, part of central core; similar to prokaryotic alpha subunit', Chr IX from 312903-313859, Verified ORF
PROTEIN	846	YCL028W	1.0000	7	3	1	AAGGGSSFMNTLMADSK LALLATVMTHSSNK LTSAAQSNPNDEQMSTIESLIQK	YCL028W	RNQ1 SGDID:S000000533,'[PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate', Chr III from 70150-71367, Verified ORF
PROTEIN	847	YLR175W	1.0000	46	7	1	EYVPLDNAEQSTSSSQETK EYVPLDNAEQSTSSSQETKETEEEPK SGHYTPIPAGSSPLKR SIIQPLETLLVGYK SLENLTGALFQRPPLISAVK SLENLTGALFQRPPLISAVKR SYISSGVINLDKPSNPSSHEVVAWIK	YLR175W	CBF5 SGDID:S000004165,'Component of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), probable rRNA pseudouridine synthase, binds to snoRNP Nop10p and also interacts with ribosomal biogenesis protein Nop53p', Chr XII from 506136-507587, Verified ORF
PROTEIN	848	YNL103W	0.9707	13	3	1	ENNSNNNKNINTNDSQEAPILK KYSDNEDDEYDDADLHGFEK YSDNEDDEYDDADLHGFEKK	YNL103W	MET4 SGDID:S000005047,'Lecine-zipper transcriptional activator, responsible for the regulation of the sulfur amino acid pathway, requires different combinations of the auxiliary factors Cbf1p, Met28p, Met31p and Met32p', Chr XIV from 427737-429755, Verified ORF
PROTEIN	849	YCL037C	1.0000	91	8	1	DGFAPLSLISK EDSAPVAAGESESSL EGDNVTGEAKEPSPLDKYFVR EIVANEAATVNVAEGTLAAK LAPTEIPVSTISIEDLDATR LQQQFYPVQPVLMAINNIAR QVNLTPAPLPTSSPWK VVNMSFGGDTNLILAALR	YCL037C	SRO9 SGDID:S000000542,'Cytoplasmic RNA-binding protein that associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif', Chr III from 58678-57374, reverse complement, Verified ORF
PROTEIN	850	YBR229C	0.9622	2	2	1	LGRNLVVLIDPHLKK VDAESIAHDPLENVLHATIIK	YBR229C	ROT2 SGDID:S000000433,'Glucosidase II catalytic subunit required for normal cell wall synthesis; mutations in rot2 suppress tor2 mutations, and are synthetically lethal with rot1 mutations', Chr II from 679216-676352, reverse complement, Verified ORF
PROTEIN	851	YLR222C	1.0000	6	4	1	DDIINLWDFNMKKK ILATPVLDEINIIDLTPGSR IWNLENGELEATLANHK LQVEQEQSLQNYMSK	YLR222C	UTP13 SGDID:S000004212,'Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr XII from 581773-579320, reverse complement, Verified ORF
PROTEIN	852	YKL117W	1.0000	23	4	1	DLESEYWPR ENDEEDEEEEIEPEVK MSDKVINPQVAWAQRSSTTDPER VINPQVAWAQR	YKL117W	SBA1 SGDID:S000001600,'Co-chaperone that binds to and regulates Hsp90 family chaperones; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins', Chr XI from 219968-220618, Verified ORF
PROTEIN	853	YGL209W	0.9985	4	2	1	FEIPEEQEEDTNNSSSGSNEEEHESLDHESSK FEIPEEQEEDTNNSSSGSNEEEHESLDHESSKSR	YGL209W	MIG2 SGDID:S000003177,'Protein containing zinc fingers, involved in repression, along with Mig1p, of SUC2 (invertase) expression by high levels of glucose; binds to Mig1p-binding sites in SUC2 promoter', Chr VII from 95862-97010, Verified ORF
PROTEIN	854	YLR438W	1.0000	48	7	1	AAQLGSSFIAQLK AFHNDVYAQFAK ALTEQAQTLTLSSR LAPPLVISEEDLQTGVETIAK LHFGPFVPNVASGHSVHK VAIAALEVIR YGHAEDFVPILESPEGK	YLR438W	CAR2 SGDID:S000004430,'L-ornithine transaminase (OTAse), catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive', Chr XII from 1012498-1013772, Verified ORF
PROTEIN	855	YBL092W	0.9838	3	3	1	LALEA TFLVANVK TYAAEIAHNISAK	YBL092W	RPL32 SGDID:S000000188,'Protein component of the large (60S) ribosomal subunit, has similarity to rat L32 ribosomal protein; overexpression disrupts telomeric silencing', Chr II from 45975-46367, Verified ORF
PROTEIN	856	YHR170W	0.9999	6	2	1	MIDFLNAVVPIK TSDLGVNDQVYYVR	YHR170W	NMD3 SGDID:S000001213,'Protein involved in nuclear export of the large ribosomal subunit; acts as a Crm1p-dependent adapter protein for export of nascent ribosomal subunits through the nuclear pore complex', Chr VIII from 443829-445385, Verified ORF
PROTEIN	857	YGL206C	1.0000	121	17	1	AEDPSNYENVIDIAEQAGK ASEFAVSLLQNPETASQIDIEK FIETYVQQVNPSK FSDLIGPSTLIK GGLPGADDLFQK HANLNNTQIINFVANK IADLFFSQNHIQQGTSLLLDALKGDTPDQGHLQTR IHEIENLLAGSNVANLDHVGDK IHEIENLLAGSNVANLDHVGDKLFENK IIEIDHDASLPSQYQK ILLPFLEQSLSQGIQDQAVYNALAK INTPELWSQIGTAQLDGLR IPDAIESYIK LASTLVYLGDYQAAVDTAR LNKEETIELARPVLQQDR SDNLPLIKPFLINVLPK VLIEDIMSLDR	YGL206C	CHC1 SGDID:S000003174,'Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; two heavy chains form the clathrin triskelion structural component; the light chain (CLC1) is thought to regulate function', Chr VII from 107508-102547, reverse complement, Verified ORF
PROTEIN	858	YOL086C	1.0000	971	18	1	ANELLINVK ANGTTVLVGMPAGAK ATDGGAHGVINVSVSEAAIEASTR EALDFFAR GLVKSPIKVVGLSTLPEIYEK GVIFYESHGK GVIFYESHGKLEYK IGDYAGIK LEYKDIPVPKPK LPLVGGHEGAGVVVGMGENVK SANLMAGHWVAISGAAGGLGSLAVQYAK SIGGEVFIDFTK SIGGEVFIDFTKEK SISIVGSYVGNR VLGIDGGEGKEELFR VVGLSTLPEIYEK YSGVCHTDLHAWHGDWPLPVK YVVDTSK	YOL086C	ADH1 SGDID:S000005446,'Alcohol dehydrogenase, fermentative isozyme active as homo- or heterotetramers; required for the reduction of acetaldehyde to ethanol, the last step in the glycolytic pathway', Chr XV from 160594-159548, reverse complement, Verified ORF
PROTEIN	859	YBR244W	1.0000	19	1	1	FSSLTKPSSLDQEIQSLLSK	YBR244W	GPX2 SGDID:S000000448,'Phospholipid hydroperoxide glutathione peroxidase induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress', Chr II from 707523-708011, Verified ORF
PROTEIN	860	YNL016W	0.9213	9	1	1	QYFQVGGPIANIK	YNL016W	PUB1 SGDID:S000004961,'Poly(A)+ RNA-binding protein, abundant mRNP-component protein hypothesized to bind a pool of non-translatable mRNAs; not reported to associate with polyribosomes', Chr XIV from 602908-604269, Verified ORF
PROTEIN	861	YFL026W	0.9553	3	2	1	LYDLYPR TFVSETADDIEKNQFYQLPTPTSSK	YFL026W	STE2 SGDID:S000001868,'Receptor for alpha-factor pheromone; seven transmembrane-domain GPCR that interacts with both pheromone and a heterotrimeric G protein to initiate the signaling response that leads to mating between haploid a and alpha cells', Chr VI from 82578-83873, Verified ORF
PROTEIN	862	YKR095W	1.0000	3	3	1	LSSITDEADEDNENLSAK LVDLLESQLNAVKEELNSIR TDMLENELNNAALLLEHTSNEK	YKR095W	MLP1 SGDID:S000001803,'Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs', Chr XI from 619447-625074, Verified ORF
PROTEIN	863	SHUFF_YJR027W	0.9542	9	3	1	ISDNPNDNGVGGTLSFLLSQR SARVNNSVQSLVSMSIIELRHGTPGK SPSDYHMYNNSCNAQNSIK	SHUFF_YJR027W	YJR027W SGDID:S000003788,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr X from 472675-473976,473978-477943, transposable_element_gene
PROTEIN	864	SHUFF_YGL037C	0.9416	2	2	1	DFGNDDFK DWESSMGMNDCGGR	SHUFF_YGL037C	PNC1 SGDID:S000003005,'Nicotinamidase that converts nicotinamide to nicotinic acid as part of the NAD(+) salvage pathway, required for life span extension by calorie restriction; PNC1 expression responds to all known stimuli that extend replicative life span', Chr VII from 427953-427303, reverse complement, Verified ORF
PROTEIN	865	YOR042W	0.9999	7	3	1	EQHHEDSEEEDSWSQFVEKDLPELTDR VSNWISDAYR VVAETTYIDTPDTETK	YOR042W	CUE5 SGDID:S000005568,'Protein containing a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern', Chr XV from 408425-409660, Uncharacterized ORF
PROTEIN	866	YLR150W	1.0000	236	7	1	EAQADAAAEIAEDAAEAEDAGK EAQADAAAEIAEDAAEAEDAGKPK ELSAEKEAQADAAAEIAEDAAEAEDAGKPK EYLEFDATFVESNTR NIDVSNLPSLA TAQLSLQDYLNQQANNQFNK TAQLSLQDYLNQQANNQFNKVPEAK	YLR150W	STM1 SGDID:S000004140,'Protein that binds G4 quadruplex and purine motif triplex nucleic acid; acts with Cdc13p to maintain telomere structure; interacts with ribosomes and subtelomeric Y' DNA; multicopy suppressor of tom1 and pop2 mutations', Chr XII from 440468-441289, Verified ORF
PROTEIN	867	YCR088W	1.0000	141	12	1	AEAPKPEVPEDEPEGEPDVK AEAPKPEVPEDEPEGEPDVKDLK ASFAANFAAVANNLFK DFDQAPLKPNQSSYKPIGK FEGLAASEKEEEEMENK GLFPSNYVSLGN GSDPDTTWLIISPNAK NVASGAPVQKEEPEQEEIAPSLPSR QEEAPEQAPEEEIEEEAEEAAPQLPSR SKFEGLAASEKEEEEMENK SPAQLWAER VNDNNDDDDWNEPELK	YCR088W	ABP1 SGDID:S000000684,'Actin-binding protein of the cortical actin cytoskeleton, important for activation of the Arp2/3 complex that plays a key role actin in cytoskeleton organization', Chr III from 265065-266843, Verified ORF
PROTEIN	868	YCL043C	1.0000	167	14	1	AAEEADADAELADEEDAIHDEL ADIADADVFEK AIESLVKDFLK DFLKGDASPIVK EQFPLFAIHDMTEDLK GLMNFVSIDAR GVVIEGYPTIVLYPGGK HFNDYDFVSAENADDDFK LAPTYQELADTYANATSDVLIAK SLDSLFDFIK SQEIFENQDSSVFQLVGK TAEAIVQFMIK YGLPQLSEEAFDELSDK YGLPQLSEEAFDELSDKIVLESK	YCL043C	PDI1 SGDID:S000000548,'Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, essential for the formation of disulfide bonds in secretory and cell-surface proteins, unscrambles non-native disulfide bonds', Chr III from 50221-48653, reverse complement, Verified ORF
PROTEIN	869	YFR034C	0.9863	2	2	1	LAVALHELASLIPAEWK TSSSAEGVVVASESPVIAPHGSSHSR	YFR034C	PHO4 SGDID:S000001930,'Basic helix-loop-helix (bHLH) transcription factor; binds cooperatively with Pho2p to the PHO5 promoter; function is regulated by phosphorylation at multiple sites and by phosphate availability', Chr VI from 225946-225008, reverse complement, Verified ORF
PROTEIN	870	YKR090W	0.9350	2	2	1	ENELSGQWHRECFKCIECGIK QSNVEYSNNEGMGSQETFR	YKR090W	PXL1 SGDID:S000001798,'LIM domain-containing protein that localizes to sites of polarized growth, required for selection and/or maintenance of polarized growth sites, may modulate signaling by the GTPases Cdc42p and Rho1p; has similarity to metazoan paxillin', Chr XI from 608588-610708, Verified ORF
PROTEIN	871	YBR249C	1.0000	51	4	1	ELASGLSFPVGFK GLINDPDVNNTFNINK ILGYDPLASPALLQVQIPATPTSLETAK ILGYDPLASPALLQVQIPATPTSLETAKR	YBR249C	ARO4 SGDID:S000000453,'3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by tyrosine', Chr II from 717989-716877, reverse complement, Verified ORF
PROTEIN	872	YGR085C	1.0000	107	5	2	EDTVSWFK LVLNISVGESGDR NFSATGNFGFGIDEHIDLGIK TTKEDTVSWFK VLEQLSGQTPVQSK	YPR102C,YGR085C	RPL11B SGDID:S000003317,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of proteins and RNA of the 60S subunit; has similarity to E. coli L5 and rat L11', Chr VII from 648911-648387, reverse complement, Verified ORF
PROTEIN	873	YPR148C	0.9980	4	2	1	FVQESLGTVSDISK KLETLINQDFKK	YPR148C	YPR148C SGDID:S000006352,'Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern', Chr XVI from 828136-826829, reverse complement, Uncharacterized ORF
PROTEIN	874	YMR131C	0.9997	7	3	1	AFSTPGYQIPK NYPQSILLTTATQSSR QFTPSNADAVQPVAQYDFHK	YMR131C	RRB1 SGDID:S000004738,'Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p', Chr XIII from 534697-533162, reverse complement, Verified ORF
PROTEIN	875	YMR109W	1.0000	12	4	1	EPMFEAAYDFPGSGSPSELPLK QANIPPPPPPPPPSSKPK RPPGIFAAMNDSVATAHADSNAADQAFAQR TELITHLKRLNDK	YMR109W	MYO5 SGDID:S000004715,'One of two type I myosins; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization', Chr XIII from 486586-490245, Verified ORF
PROTEIN	876	YNL251C	0.9998	3	2	1	DCCDYQHGYSIIPMHR TLPSHTSVGTVAPPQAHTITEYGSR	YNL251C	NRD1 SGDID:S000005195,'RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit (Rpo21p), required for transcription termination and 3' end maturation of nonpolyadenylated RNAs', Chr XIV from 174316-172589, reverse complement, Verified ORF
PROTEIN	877	YMR105C	0.9845	6	1	1	LVIGQHGLLSTPAASHIMR	YMR105C	PGM2 SGDID:S000004711,'Phosphoglucomutase, catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase', Chr XIII from 477605-475896, reverse complement, Verified ORF
PROTEIN	878	YPL262W	1.0000	19	7	1	ERMPLPLVHAFGVLK LDDHFPLVVFQTGSGTQSNMNANEVISNR LITDAAYSFR MPLPLVHAFGVLK MPLPLVHAFGVLKK SAAIVNESLGGLDPK TLSFLAQGGTAVGTGLNTKPGFDVK	YPL262W	FUM1 SGDID:S000006183,'Fumarase, converts fumaric acid to L-malic acid in the TCA cycle; cytosolic and mitochondrial localization determined by the N-terminal mitochondrial targeting sequence and protein conformation', Chr XVI from 47336-48802, Verified ORF
PROTEIN	879	YBR221C	1.0000	35	8	1	ELEDFAFPDTPTIVK GPNGAAVGVGAQHSQDFSPWYGSIPGLK NVQFSLEAAEILQK SIRPLDTEAIIK VLVPYSAEDAR VTGADVPTPYAK VVDTPITEYGFTGLAVGAALK YGVSAEVINLR	YBR221C	PDB1 SGDID:S000000425,'E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, which is an evolutionarily-conserved multi-protein complex found in mitochondria', Chr II from 666248-665148, reverse complement, Verified ORF
PROTEIN	880	YDR378C	0.9835	7	3	1	ASTEGSVTTEFLSDIIGK FNSDVFLR GTQVMYISEQKI	YDR378C	LSM6 SGDID:S000002786,'Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA', Chr IV from 1229601-1229341, reverse complement, Verified ORF
PROTEIN	881	YNL307C	0.9989	4	3	1	AIFQGQEPLLQLR ILAHQFFNELR LQYFFTHLSPQDNK	YNL307C	MCK1 SGDID:S000005251,'Protein serine/threonine/tyrosine (dual-specificity) kinase involved in control of chromosome segregation and in regulating entry into meiosis; related to mammalian glycogen synthase kinases of the GSK-3 family', Chr XIV from 57573-56446, reverse complement, Verified ORF
PROTEIN	882	YMR295C	0.9845	8	1	1	TASVADPILDAVQEAQPFEQAADTFHDNMNR	YMR295C	YMR295C SGDID:S000004910,'Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud', Chr XIII from 858889-858296, reverse complement, Uncharacterized ORF
PROTEIN	883	YDR472W	0.9999	3	1	1	LSNASNSPGMLANSSTATSASANER	YDR472W	TRS31 SGDID:S000002880,'One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates vesicle docking and fusion; involved in endoplasmic reticulum (ER) to Golgi membrane traffic', Chr IV from 1403314-1404165, Verified ORF
PROTEIN	884	YIL142W	1.0000	34	10	1	AVVSSASEAAEVLLR FGINTFINR GATDQTLDEAER ILSQDKDHFAELATNAILR LASAAALDALTK LKGSTNLEHIQIIK LSAFVGAIAVGDLVK QLPTILADNAGFDSSELVSK TMFREDLIHIAK VQDDEVGDGTTSVTVLSAELLR	YIL142W	CCT2 SGDID:S000001404,'Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr IX from 83302-84885, Verified ORF
PROTEIN	885	YPR004C	0.9999	7	1	1	LLSPLADVLHAAIGATR	YPR004C	YPR004C SGDID:S000006208,'Electron transfer flavoprotein complex subunit ETF-alpha; contains a FAD binding domain; interacts with YFH1, the yeast frataxin homolog', Chr XVI from 565038-564004, reverse complement, Verified ORF
PROTEIN	886	YMR031C	1.0000	12	4	1	ETYLSQLTSQQVLTLAR IASGLISPVLGEVSER LIGMTSEEYLTQNK YGVYQSPAQSYSIGVSDAHAASDK	YMR031C	YMR031C SGDID:S000004633,'Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern', Chr XIII from 334742-332211, reverse complement, Uncharacterized ORF
PROTEIN	887	YER070W	1.0000	40	5	1	AAPIVDDEETEFDIYNSK DLVDLGIWDEGMK IADQATENVADISNLK INGQVAERPQHLIMR VLSGEFQVVNPYLLR	YER070W	RNR1 SGDID:S000000872,'Ribonucleotide-diphosphate reductase (RNR), large subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits', Chr V from 298948-301614, Verified ORF
PROTEIN	888	YOL039W	1.0000	158	5	1	AILESVGIEIEDEK AILESVGIEIEDEKVSSVLSALEGK SVDELITEGNEK VSSVLSALEGK YLAAYLLLNAAGNTPDATK	YOL039W	RPP2A SGDID:S000005399,'Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm', Chr XV from 254296-254616, Verified ORF
PROTEIN	889	YLR447C	1.0000	17	2	1	LYPLATFHLAQAQDFEGVR SINIALNSLQSSDIDPDLK	YLR447C	VMA6 SGDID:S000004439,'Subunit D of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found in the endomembrane system; stabilizes VO subunits; required for V1 domain assembly on the vacuolar membrane', Chr XII from 1027890-1026853, reverse complement, Verified ORF
PROTEIN	890	YGL014W	0.9845	2	1	1	ESPTTYGAAYPYGGPLLQPNPIMPGHPHNISSPIYGIR	YGL014W	PUF4 SGDID:S000002982,'Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors', Chr VII from 466146-468812, Verified ORF
PROTEIN	891	YMR217W	1.0000	141	15	1	FHAILVDNGVLR GMNDSTVWMSHGDKLHGLPTGYK HLGELLGIPHDLVWR HPFPGPGIAIR IIGNTFIHVFER ISELGWTPK KIIGNTFIHVFER KLVGPTAEVIGAVSGGVDSTVASK LIEPLRELFK LIEPLRELFKDEVR LMTEAIGDRFHAILVDNGVLR LVGPTAEVIGAVSGGVDSTVASK QNWTMENFIDTEINR THHNVGGLLENMK VTYDITSKPPATVEWE	YMR217W	GUA1 SGDID:S000004830,'GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation', Chr XIII from 701789-703366, Verified ORF
PROTEIN	892	YML074C	1.0000	42	8	1	GWDIGVAGMSVGGER IEEVQEEDEEDNDGEEEQEEEEEEEQKEEVKPEPK IIIPAPYAYGK ITMAALNPEAIDEENKPSTLR QALPGIPANSELTFDVK RIIIPAPYAYGK VFDKNTSGKPFAFK VLEGGIVIEDR	YML074C	FPR3 SGDID:S000004539,'Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase); FK506 binding protein; phosphorylated by casein kinase II (Cka1p-Cka2p-Ckb1p-Ckb2p) and dephosphorylated by Ptp1p', Chr XIII from 121324-120089, reverse complement, Verified ORF
PROTEIN	893	YDR032C	1.0000	58	5	1	ALGGAPKPDYPIATQDTLTEYDAFLFGIPTR FGNFPAQWK GIEAAGGSADIYQVEETLSPEVVK NVFAELTNMDEVHGGSPWGAGTIAGSDGSR SPSALELQVHEIQGK	YDR032C	PST2 SGDID:S000002439,'Protein of unknown function with similarity to members of a family of flavodoxin-like proteins; induced by oxidative stress in a Yap1p dependent manner; GFP-fusion protein localizes to the cytoplasm in a punctate pattern', Chr IV from 504692-504096, reverse complement, Verified ORF
PROTEIN	894	YJL014W	1.0000	18	6	1	GVSDLAQHYLLK IVDMVSYGIWEPEVIK LLSQLRAKHAQGNFTTGIDGDK MLLDPMGGLVLTNDGHAILR NIHPVIIIQALKK NVMLSPSLSPGGGATEMAVSVK	YJL014W	CCT3 SGDID:S000003551,'Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo', Chr X from 407474-409078, Verified ORF
PROTEIN	895	YOR126C	0.9253	1	1	1	AFQQEGGDAWQQLLTDGLHFSGK	YOR126C	IAH1 SGDID:S000005652,'Isoamyl acetate-hydrolyzing esterase, required in balance with alcohol acetyltransferase to maintain optimal amounts of isoamyl acetate, which is particularly important in sake brewing', Chr XV from 560678-559962, reverse complement, Verified ORF
PROTEIN	896	YLR340W	1.0000	335	7	1	AGAVAPEDIWVR GFLSDLPDFEK GNVGFVFTNEPLTEIK GTIEIVSDVK SLFVVGVDNVSSQQMHEVR SLFVVGVDNVSSQQMHEVRK TSFFQALGVPTK	YLR340W	RPP0 SGDID:S000004332,'Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphorylated on serine 302', Chr XII from 805887-806825, Verified ORF
PROTEIN	897	YEL032W	0.9910	3	2	1	IPTPAIYPTEDTEGNKLTTEYGYSTFIDHQR TLILGNTVYPLHAR	YEL032W	MCM3 SGDID:S000000758,'Protein involved in DNA replication; component of the Mcm2-7 hexameric complex that binds chromatin as a part of the pre-replicative complex', Chr V from 86937-89852, Verified ORF
PROTEIN	898	YOR108W	0.9991	5	7	1	APYGGELVVSAFSGSHQDAIKK ATIHTYLATSDMFR EIEVSFPSASQTDFDFTR IPYLPLDPK LSVQNYSEHSLGSGSATQAASFINLSYIK SEEITKLFKETYNYNNNEHIYVTLLNYEVK SLGLDVPRPMQVDFSNTLQK	YOR108W	LEU9 SGDID:S000005634,'Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), catalyzes the first step in the leucine biosynthesis pathway; the minor isozyme, responsible for the residual alpha-IPMS activity detected in a leu4 null mutant', Chr XV from 523028-524842, Verified ORF
PROTEIN	899	YDR388W	1.0000	17	6	1	AIVAELQETLKPDLALVEEK AQAQVEVAQQEYDYYNDLLK IPYFDLNSDIVESYIAK MGEQTEDPVYEDAER MSDPNATIPEDNPQGIEASEQYR SMEEIFKPISGK	YDR388W	RVS167 SGDID:S000002796,'Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) involved in regulation of actin cytoskeleton, endocytosis, and viability following starvation or osmotic stress; homolog of mammalian amphiphysin', Chr IV from 1250178-1251626, Verified ORF
PROTEIN	900	YOR375C	1.0000	230	15	1	AANLGGVAVSGLEMAQNSQR EIGYLFGAYR FHPSVNLSILK FIAEGSNMGSTPEAIAVFETAR FLGFEQIFK NSWEGVLTGK SLEQIVNEYSTFSENK STATGPSEAVWYGPPK VIELGGTVVSLSDSK VLPIVSVPER VLPIVSVPERIIQFR VQYIAGARPWTHVQK VSDAMFDQGDVF VTISGSGNVAQYAALK VTWENDKGEQEVAQGYR	YOR375C	GDH1 SGDID:S000005902,'NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh3p; expression regulated by nitrogen and carbon sources', Chr XV from 1043040-1041676, reverse complement, Verified ORF
PROTEIN	901	YHR066W	1.0000	5	2	1	EKETEEEDVEMEEPKPSENLQPTPR LTELGPRLTLKLVK	YHR066W	SSF1 SGDID:S000001108,'Constituent of 66S pre-ribosomal particles, required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family', Chr VIII from 229337-230698, Verified ORF
PROTEIN	902	SHUFF_YPL086C	0.9318	3	2	1	AEPVMSASQKIDARQGTSLDQNCVDCDVYR GGPR	SHUFF_YPL086C	ELP3 SGDID:S000006007,'Histone acetyltransferase subunit of the Elongator complex, which is a component of the RNA polymerase II holoenzyme; activity is directed specifically towards histones H3 and H4; disruption confers resistance to K. lactis zymotoxin', Chr XVI from 386443-384770, reverse complement, Verified ORF
PROTEIN	903	YDL171C	1.0000	66	25	1	AINIDLSPILTPAHVIRPGVPTK EFIGNDEGEVTAIR EFISQDSLSLK EPTILQPLLVPLYDEK FNELLFK FSTNTFPSWDR GTIATLDDSSYSIDGGK HGAASVLNFELLPEPPVER HNAVVYAIGSTIPR HSTPNVGLISPPPHHDIYSIEDLK HVNEPTAIASLQDTVR LDDLLSKTANLVPKEFISQDSLSLK LIDEAEVTLDR LLANGYTFEQVTFLLTPMALTGK LLETNNFPEFTGR NIDFAMQLLESNTK NLIQEHWNYTQSDLAAR PGVPTKFTKK RGTIATLDDSSYSIDGGK SNQEVDDEVNTLLIANQK SPILHWNEFQALK SPILHWNEFQALKNIEAAYPSWSVAEIDITFDK SVNLPESGEYHFR YAVGNVFFK YYITSDDRVICASEVGVIPIENSLVVQKGK	YDL171C	GLT1 SGDID:S000002330,'NAD(+)-dependent glutamate synthase (GOGAT), synthesizes glutamate from glutamine and alpha-ketoglutarate; with Gln1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source', Chr IV from 155641-149204, reverse complement, Verified ORF
PROTEIN	904	YML094W	0.9861	6	3	1	LLVPASASLYIPGK QQFDQELQHFTQSLQALTMAK VDKLNKESVQIQDIIK	YML094W	GIM5 SGDID:S000004559,'Subunit of the heterohexameric cochaperone prefoldin complex which binds specifically to cytosolic chaperonin and transfers target proteins to it', Chr XIII from 82275-82290,82374-82849, Verified ORF
PROTEIN	905	YNL052W	1.0000	4	2	1	NANPWGGYSQVQSK WENMPSTEQQDIVSK	YNL052W	COX5A SGDID:S000004997,'Subunit Va of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; predominantly expressed during aerobic growth while its isoform Vb (Cox5Bp) is expressed during anaerobic growth', Chr XIV from 531726-532187, Verified ORF
PROTEIN	906	YKL192C	0.9448	2	1	1	SVGETVDYIASNPDAN	YKL192C	ACP1 SGDID:S000001675,'Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate, which is a precursor to lipoic acid; activated by phosphopantetheinylation catalyzed by Ppt2p', Chr XI from 80542-80165, reverse complement, Verified ORF
PROTEIN	907	YJL026W	1.0000	35	7	1	AAADALSDLEIK AAADALSDLEIKDSK ESEFLFNAIHTIPEIGEK IVTEAVEIEQR SNLNKELETLREENR VENPFDFMENISLAGK WIQDADALFGER	YJL026W	RNR2 SGDID:S000003563,'Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits', Chr X from 392321-393520, Verified ORF
PROTEIN	908	YJR063W	0.9001	6	1	1	VVTTTADDAFPSSLR	YJR063W	RPA12 SGDID:S000003824,'RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex', Chr X from 555110-555487, Verified ORF
PROTEIN	909	YPL028W	1.0000	119	11	1	DGLNDAYDGLAMGVHAEK EGKFDNEIVPVTIK EQQDNFAIESYQK FDNEIVPVTIK FGQTVLVDGVER GWGEAAHQPADFTWAPSLAVPK QVALAAGLSNHIVASTVNK TAVELGAVALK TPIGSFQGSLSSK VPELDASKDFDEIIFGNVLSANLGQAPAR VVVTLLSILQQEGGK	YPL028W	ERG10 SGDID:S000005949,'Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme that transfers an acetyl group from one acetyl-CoA molecule to another, forming acetoacetyl-CoA; involved in the first step in mevalonate biosynthesis', Chr XVI from 498094-499290, Verified ORF
PROTEIN	910	YCR084C	1.0000	18	5	1	ANHSKPIPPFLLDLDSQSVPDALKK DVENLNTSSSPSSDLYIR EEDATPASLHQDHYLVPYNQR INDTGSATTATTTTATETEIKPK QEFLQVSQEANTYR	YCR084C	TUP1 SGDID:S000000680,'General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repressive chromatin structure through interactions with histones H3 and H4, appears to enhance expression of some genes', Chr III from 262449-260308, reverse complement, Verified ORF
PROTEIN	911	YDR508C	0.9895	5	3	1	QIGSIEPENEVEYFEK RAEGSHANSPDSSNSNGTTPISTK TIENMEYEGEHHASYLR	YDR508C	GNP1 SGDID:S000002916,'High-affinity glutamine permease, also transports Leu, Ser, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids', Chr IV from 1468436-1466445, reverse complement, Verified ORF
PROTEIN	912	YKL210W	1.0000	156	16	1	AAQLHLGFQALHQFAVR FSEVEGLDKLNDGTLFK GDIPGVVAFFGGLVAQEVLK GLFGNTFVDLGDEFTVLDPTGEEPR HNGELPRTMNDEDANELIK IIPAIATTTSLVTGLVNLELYK LNLPITQLVK LVTDLSVQQPEVLGEGVDVNEDLIK NGFVNLALPFFGFSEPIASPK QFMYFDSLESLPDPK QLLFNFPK QQLSNPEFVFSDFAK SFPNKIDHTIAWAK SVIDHMIIPEFTPNANLK TGMVSDIEPDGTVTMLDDNRHGLEDGNFVR VEVLGPFAFR	YKL210W	UBA1 SGDID:S000001693,'Ubiquitin activating enzyme, involved in ubiquitin-mediated protein degradation and essential for viability', Chr XI from 39164-42238, Verified ORF
PROTEIN	913	YLR257W	0.9679	3	1	1	EGALLTDEVDLENVDASK	YLR257W	YLR257W SGDID:S000004247,'Hypothetical protein', Chr XII from 658828-659793, Uncharacterized ORF
PROTEIN	914	YJL041W	1.0000	18	7	1	GGEQISQLYSDAVMAEHSQNK KNDEVSKPAFSFGAK PALSFGTATSDNKTTNTTPSFSFGAK QQDELENFLDNFETK TDAQAPTTGFSFGSQLGGNK TTNIDINNEDENIQLIK WTNQLTESASHFEQYTK	YJL041W	NSP1 SGDID:S000003577,'Essential component of the nuclear pore complex, which mediates nuclear import and export', Chr X from 365701-365701,365820-368290, Verified ORF
PROTEIN	915	YDL185W	1.0000	266	26	1	AIKEESQSIYIPR ATIQVYEETAGLTVGDPVLR EILSNAEELEQVVQLVGK ETFLAGLIDSDGYVTDEHGIK FQVGDHISGGDIYGSVFENSLISSHK FRPAPAAAFAR FYDSNYPEFPVLR GTITWIAPAGEYTLDEK ILEVEFDGK KFRPAPAAAFAR KHFPSINTSVSYSK LGEMPADQGFPAYLGAK LSADYPLLTGQR MKEILSNAEELEQVVQLVGK NIPSFLSTDNIGTR NNLNTENPLWDAIVGLGFLK PREVIKLPR RTTLVANTSNMPVAAR SALSDSDKITLDVATLIK SDFTLYHTWPVR SKFHLTIEGPK SLGLVVSVNAEPAK TGKPLSVELGPGLMETIYDGIQRPLK TTLVANTSNMPVAAR VLDALFPCVQGGTTCIPGAFGCGK WQFTPGK	YDL185W	TFP1 SGDID:S000002344,'Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites; protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI), which is a site-specific endonuclease', Chr IV from 126788-130003, Verified ORF
PROTEIN	916	YJL052W	1.0000	180	17	1	DPANLPWGSLK DWRGGRTASGNIIPSSTGAAK ELDTAQK ELDTAQKHIDAGAK GVLGYTEDAVVSSDFLGDTHASIFDASAGIQLSPK IATYQERDPANLPWGSLK IDVAVDSTGVFK IVSNASCTTNCLAPLAK KVVITAPSSSAPMFVVGVNHTK LISWYDNEYGYSAR LTGMAFR TASGNIIPSSTGAAK VINDAFGIEEGLMTTVHSMTATQK VLPELQGK VPTVDVSVVDLTVK VVDLIEYVAK VVITAPSSSAPMFVVGVNHTK	YJL052W	TDH1 SGDID:S000003588,'Glyceraldehyde-3-phosphate dehydrogenase, isozyme 1, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell-wall ', Chr X from 338188-339186, Verified ORF
PROTEIN	917	YER136W	1.0000	37	8	1	APLVIADPTYFPEK FMGIAELFEPR IYKVPANEIEAISSPLMGIFEK LSAIYGGTYMLDTPIDEVLYK LSAIYGGTYMLDTPIDEVLYKK LSAIYGGTYMLDTPIDEVLYKKDTGK SDIYVAIVSDAHNVCSK VPANEIEAISSPLMGIFEK	YER136W	GDI1 SGDID:S000000938,'GDP dissociation inhibitor, regulates vesicle traffic in secretory pathways by regulating the dissociation of GDP from the Sec4/Ypt/rab family of GTP binding proteins', Chr V from 439612-440967, Verified ORF
PROTEIN	918	YLR197W	1.0000	198	11	1	AILDLNLPK ASLNDDSLHDLAALLNEDSGIAQR EVQEQINDFGAFTK GAAEALENANDISEGLVSESLK IDNYSEEPSNVFGSVLK IDNYSEEPSNVFGSVLKK LIELVSFAPFK LKEVQEQINDFGAFTK MHTVAPNLSELIGEVIGAR NELAIQEAMELYNK YGLIYHSGFISK	YLR197W	SIK1 SGDID:S000004187,'Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects', Chr XII from 546099-547613, Verified ORF
PROTEIN	919	YLR351C	0.9999	3	3	1	EPSTSVQFLSNLANK IILVGGTIPELDPK NLQSSYHAYGHSIVVDPR	YLR351C	NIT3 SGDID:S000004343,'Nit protein, one of two proteins in S. cerevisiae with similarity to the Nit domain of NitFhit from fly and worm and to the mouse and human Nit protein which interacts with the Fhit tumor suppressor; nitrilase superfamily member', Chr XII from 830363-829488, reverse complement, Verified ORF
PROTEIN	920	YDL198C	1.0000	8	4	1	LFTLFPGLGYAASYK LLGSASAGIMEIAVFHPVDTISK NAPGSFALFGGNAFAK SAAAGSLIGIGEIVLLPLDVLK	YDL198C	GGC1 SGDID:S000002357,'Mitochondrial GTP/GDP transporter, essential for mitochondrial genome maintenance; has a role in mitochondrial iron transport; member of the mitochondrial carrier family; (putative) mitochondrial carrier protein', Chr IV from 104552-103650, reverse complement, Verified ORF
PROTEIN	921	YPR033C	1.0000	78	12	1	DWADSDMVIR EAIFSTLSGLFK EMTEEKGQSEETADKIGEYVK HGGVTIDTPVFELR ILDGIFQIAGVKDEDVR LGQEFADDDGELVSAADIVPIVQEK QGLDDIATLMK QLWDAGIEAEYVYK SAEDASEFVGVGSIAAGGR YDLTVPFAR YDNLVNMFSEASGK YDNLVNMFSEASGKK	YPR033C	HTS1 SGDID:S000006237,'Cytoplasmic and mitochondrial histidine tRNA synthetase; encoded by a single nuclear gene that specifies two messages; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence ', Chr XVI from 639016-637376, reverse complement, Verified ORF
PROTEIN	922	YJL117W	0.9404	16	3	1	HETKDPVVNNTHIIVYR NTGSVAGWFYQLAR VFGINLNDLVAR	YJL117W	PHO86 SGDID:S000003653,'Endoplasmic reticulum (ER) resident protein required for ER exit of the high-affinity phosphate transporter Pho84p, specifically required for packaging of Pho84p into COPII vesicles', Chr X from 192452-193387, Verified ORF
PROTEIN	923	YDR050C	1.0000	341	12	1	ADVDGFLVGGASLKPEFVDIINSR ASGAFTGENSVDQIK ASGAFTGENSVDQIKDVGAK DKADVDGFLVGGASLKPEFVDIINSR ILYGGSANGSNAVTFK KPQVTVGAQNAYLK RSYFHEDDKFIADK SYFHEDDKFIADK SYFHEDDKFIADKTK TFFVGGNFK TLDVVER WVILGHSER	YDR050C	TPI1 SGDID:S000002457,'Triose phosphate isomerase, abundant glycolytic enzyme; mRNA half-life is regulated by iron availability; transcription is controlled by activators Reb1p, Gcr1p, and Rap1p through binding sites in the 5' non-coding region', Chr IV from 556470-555724, reverse complement, Verified ORF
PROTEIN	924	YOR117W	1.0000	28	10	1	AMEVDEKPTETYSDVGGLDK DSYLILDTLPSEFDSR HEDFVEGISEVQAR KMTTDDDINWQELAR LAAPQLVQMYIGEGAK MTTDDDINWQELAR QIEELVEAIVLPMK QTVFLPMVGLVDPDKLKPNDLVGVNK TMLELLNQLDGFSSDDRVK VDVLDPALLR	YOR117W	RPT5 SGDID:S000005643,'One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription', Chr XV from 545030-546334, Verified ORF
PROTEIN	925	YDR064W	1.0000	210	10	1	GISSSAIPYSR GLTPSQIGVLLR KGLTPSQIGVLLR KGLTPSQIGVLLRDAHGVTQAR LILIESR LSSESVIEQIVK NAPAWFK SNGLAPEIPEDLYYLIK TVAVLPPNWK YESATASALVN	YDR064W	RPS13 SGDID:S000002471,'Protein component of the small (40S) ribosomal subunit; has similarity to E. coli S15 and rat S13 ribosomal proteins', Chr IV from 579456-579476,580016-580450, Verified ORF
PROTEIN	926	YFR004W	1.0000	7	4	1	ANIQALIHGLNR LIDTGALINNLEPR MYDYEEKEESNLAATK RIEEEKELTEEELK	YFR004W	RPN11 SGDID:S000001900,'Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates', Chr VI from 153388-154308, Verified ORF
PROTEIN	927	YPR081C	0.9921	2	2	1	FTDWMCR MLHNPDESDWDK	YPR081C	GRS2 SGDID:S000006285,'Protein with sequence similarity to Grs1p, which is a glycyl-tRNA synthetase; cannot substitute for Grs1p; possible pseudogene that is expressed at very low levels', Chr XVI from 703968-702112, reverse complement, Verified ORF
PROTEIN	928	YGR054W	1.0000	9	3	1	SELQIHSSVQEYISQHPSR TIPGLVPGMSANK VSLTTGPVHDFTWSPTSR	YGR054W	YGR054W SGDID:S000003286,'Eukaryotic initiation factor (eIF) 2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A', Chr VII from 596697-598625, Verified ORF
PROTEIN	929	YGL001C	0.9997	5	3	1	ANDPSSDFYTVALRPAGIFGPGDR FQIGDNNNLFDWTYAGNVADAHVLAAQK QFTFNVDDIK	YGL001C	ERG26 SGDID:S000002969,'C-3 sterol dehydrogenase, catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis', Chr VII from 496506-495457, reverse complement, Verified ORF
PROTEIN	930	YOL022C	0.9999	18	3	1	FQEVVGYNPLQVLR LLLQAFSPLDDEQMSAIQQR PGDVFLAFVDAPVK	YOL022C	YOL022C SGDID:S000005382,'Protein required for cell viability', Chr XV from 281499-280273, reverse complement, Uncharacterized ORF
PROTEIN	931	YHL001W	1.0000	199	7	2	AALTDFER FQVMVLR LAAIVEIIDQK LAAIVEIIDQKK LVEVGRVVLIKK QAINLGQVVLTPLTFALPR WAASSWAK	YHL001W,YKL006W	RPL14B SGDID:S000000993,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Ap and has similarity to rat L14 ribosomal protein', Chr VIII from 104272-104400,104799-105086, Verified ORF
PROTEIN	932	YDR368W	1.0000	26	6	1	HIDAAAIYLNEEEVGR IFTLPEDDFK LNTGASIPVLGFGTWR LWGTEQRDPEAALNK TWELMQELPK VVPATNQIEIHPLLPQDELIAFCKEK	YDR368W	YPR1 SGDID:S000002776,'2-methylbutyraldehyde reductase, may be involved in isoleucine catabolism', Chr IV from 1213896-1214834, Verified ORF
PROTEIN	933	YAR007C	0.9838	4	4	1	FQSMELQRGDIIRVIIAEPAIVR ITQSIQMNEYDFR LFNVNFLDTSGEIR QEPGMGGQSAASLTK	YAR007C	RFA1 SGDID:S000000065,'Subunit of heterotrimeric Replication Factor A (RF-A), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination', Chr I from 158621-156756, reverse complement, Verified ORF
PROTEIN	934	YLR208W	1.0000	31	5	1	ASWSLSGNVLALSGGDNK DVAWSPTVLLR FPDVLWR LIDTLTGHEGPVWR YNSDAQTYVLESTLEGHSDWVR	YLR208W	SEC13 SGDID:S000004198,'Component of both the Nup84 nuclear pore sub-complex and of the COPII complex (Sar1p, Sec13p, Sec16p, Sec23p, Sec24p, Sec31p, Sfb2p, and Sfb3p) which is important for the formation of ER to Golgi transport vesicles', Chr XII from 559553-560446, Verified ORF
PROTEIN	935	YML078W	0.9539	3	3	1	AIESYGTASGKPRAEIVIEEAGEL IEFELYDNVVPK IIPDFMIQGGDTDLTNGFGGK	YML078W	CPR3 SGDID:S000004543,'Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria', Chr XIII from 111002-111550, Verified ORF
PROTEIN	936	YML085C	1.0000	20	5	1	AFHESNSVSEITNACFEPGNQMVK AIYVDLEPNVIDEVR DLFHPEQLISGKEDAANNYAR EILGDVLDR IHFPLVSYSPVLSK	YML085C	TUB1 SGDID:S000004550,'Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules', Chr XIII from 99400-99376,99259-97941, reverse complement, Verified ORF
PROTEIN	937	YER080W	1.0000	8	4	1	EAGSSAELMYPR IPYPLENENTLSYR LFHPDLDPMNIIVNK TLKEQITTYENLAK	YER080W	YER080W SGDID:S000000882,'The authentic, non-tagged protein was localized to the mitochondria', Chr V from 319959-321842, Uncharacterized ORF
PROTEIN	938	YHR179W	1.0000	235	9	1	DFKPQALGDTNLFKPIK DWAVEYYAQR FAYSIWK FFISNPDLVDR FFISNPDLVDRLEK FTLEVVDAVVDAIGPEK LAFVHLVEPR MSAEGYIDYPTYEEALK YDSASDNVYMNAEQEEK	YHR179W	OYE2 SGDID:S000001222,'Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN), homologous to Oye3p with slight differences in ligand binding and catalytic properties; may be involved in sterol metabolism', Chr VIII from 462502-463704, Verified ORF
PROTEIN	939	YPL231W	1.0000	441	46	1	AAQQQWGNDFYK AKYETSILEHSGIR ANIQLDFPELKPYK AVSITSFGFGQK EFGTTPEKPEETPLEELAETFQDTFSGALGK EHAPYTDELEEDVYLDPLAR EIDPSQTTQLAGMDVEDALDKDSTK EIDPSQTTQLAGMDVEDALDKDSTKEVASLPNK EIYYTPDPSELAAK EMIQEVIVEEDLEPFEASK ETIPFLHLR EVVSEAINIMNR FLESSKEIDPSQTTQLAGMDVEDALDKDSTK FMEYHISNTDETKGENYQLVK GALATYGLTIDDLGVASFHGTSTK GGQAIVVHPDYLYGAITEDRYNEYVAK GIETRPAQVILPMSPNHGTFGGDGMYSESK GSIGAEVLQGLLQGGAK GSTLIVVPFNQGSK GTGLMSANNIIAEGIEK ILEQFEYVLYPSK IMLTNILR KLSQYVQEMALGGPITK LIEPELFNGYNPEKK LSLETLFNR LSQYVQEMALGGPITK LVAGQIPTGWNAK MGVPIYGIVAMAATATDK MPGGFTITVAR NKYESYDAALSLHR PAQVILPMSPNHGTFGGDGMYSESK QDGVLLVALSNEPAAR QIAPAELEGLLDLER QLSSLFLDGLEK QVLDVDPVYKDVAKPTGPK QVTDYYQSIYAK SEGNPVIGVFQK SPVMADLNGGLQFVPELK TFDSSWNWAK TLGEQLIENCK VIVVTGFAEVGPWGSAR VSISHDDLQAVAVAVSTK VSISHDDLQAVAVAVSTKK VVEIGPSPTLAGMAQR WIETQDVFLK YETSILEHSGIR	YPL231W	FAS2 SGDID:S000006152,'Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains beta-ketoacyl reductase and beta-ketoacyl synthase activities', Chr XVI from 108652-114315, Verified ORF
PROTEIN	940	YLL045C	1.0000	351	14	1	HWGGGILGNK LKVPPTIAQFQYTLDR LVSTIDANFADK LVSTIDANFADKYDEVK LVSTIDANFADKYDEVKK MGVPYAIIK NFGIGQAVQPK TSAVAALTEVR TSAVAALTEVRAEDEAALAK VAPAPFGAK VPPTIAQFQYTLDR WPEYVR YGLNHVVSLIENK YGLNHVVSLIENKK	YLL045C	RPL8B SGDID:S000003968,'Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits', Chr XII from 48628-47858, reverse complement, Verified ORF
PROTEIN	941	YPL210C	0.9993	5	2	1	DIDIDKLIQLGVKPLESSAK VPLSVATELMNR	YPL210C	SRP72 SGDID:S000006131,'Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane', Chr XVI from 156211-154289, reverse complement, Verified ORF
PROTEIN	942	YGR130C	1.0000	7	3	1	QRQELEEQAHQAQLDHEQQITQVK TAAPSNPVATPENPELIVK TSTPETSEPESEEDESPIDPSK	YGR130C	YGR130C SGDID:S000003362,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; specifically phosphorylated in vitro by mammalian diphosphoinositol pentakisphosphate (IP7)', Chr VII from 753849-751399, reverse complement, Uncharacterized ORF
PROTEIN	943	YER103W	0.9995	5	12	1	ARFEELCADLFR DAGTIAGLNVLR DAVVTVPAYFNDSQR DNNLLGKFELSGIPPAPR FELSGIPPAPR IINEPTAAAIAYGLDK IINEPTAAAIAYGLDKK NQAAMNPHNTVFDAKR SEVFSTYADNQPGVLIQVFEGER TFTPEEISSMILTK TKDNNLLGKFELSGIPPAPR TTPSYVAFTDTER	YER103W	SSA4 SGDID:S000000905,'Heat shock protein that is highly induced upon stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the HSP70 family; cytoplasmic protein that concentrates in nuclei upon starvation', Chr V from 364585-366513, Verified ORF
PROTEIN	944	YOR128C	0.9985	24	4	1	ALATPGSSVYLYGK QEEEVLVKAQKLETVGYEAYLENK TIIAGAGGAAHLPGMVAAMTPLPVIGVPVK TVILDAENSPAK	YOR128C	ADE2 SGDID:S000005654,'Phosphoribosylaminoimidazole carboxylase, catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway; red pigment accumulates in mutant cells deprived of adenine', Chr XV from 566192-564477, reverse complement, Verified ORF
PROTEIN	945	YJR065C	1.0000	13	5	1	DITLFIQSLLR LGFAGNDSPSWVFPTAIATAAPSNTK NFSLFNMV SLTGTVIDSGDGVTHVIPVAEGYVIGSAIK TEPEDHFFLLTEPPLNPPENR	YJR065C	ARP3 SGDID:S000003826,'Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity', Chr X from 559073-557724, reverse complement, Verified ORF
PROTEIN	946	YOR086C	0.9994	3	4	1	NCYYKPSILHLSGEGSAKLMLQISWFPIDTK PVRLEIGSNSVAYTPPIGAIRVFIEK SLGEFNVNVQDLFK VPDFDFVATLFGR	YOR086C	TCB1 SGDID:S000005612,'Contains three calcium and lipid binding domains; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; C-terminal portion of Tcb1p, Tcb2p and Tcb3p interact', Chr XV from 486781-483221, reverse complement, Verified ORF
PROTEIN	947	YLR413W	1.0000	9	3	1	IIEEHESPIDAEKNFAR LSPVFELFASSK WAETNAATFMPMLK	YLR413W	YLR413W SGDID:S000004405,'Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery', Chr XII from 951153-953180, Uncharacterized ORF
PROTEIN	948	YLR429W	1.0000	30	6	1	FHDHVDEDGEPIDIKPVK IGIWDIPENYK LSTLVLQLEDVVDKLTK QIGIWDAFNIEK SVEGPILVSMR VGHVLYHPVAENVLASSSGDYTVK	YLR429W	CRN1 SGDID:S000004421,'Coronin, cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regulate its activity', Chr XII from 990774-992729, Verified ORF
PROTEIN	949	YGL242C	0.9845	1	1	1	NNLDLLETVFDSLDNDPEK	YGL242C	YGL242C SGDID:S000003211,'Putative protein of unknown function; deletion mutant is viable', Chr VII from 45197-44652, reverse complement, Uncharacterized ORF
PROTEIN	950	YBR009C	1.0000	75	7	2	DNIQGITKPAIR ILRDNIQGITKPAIR ISGLIYEEVR SFLESVIR TLYGFGG TVTSLDVVYALK TVTSLDVVYALKR	YNL030W,YBR009C	HHF1 SGDID:S000000213,'One of two identical histone H4 proteins (see also HHF2); core histone required for chromatin assembly and chromosome function; contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity', Chr II from 255682-255371, reverse complement, Verified ORF
PROTEIN	951	YBR048W	0.9993	12	2	2	ILTGTVVSTK NVPVHVSPAFR	YDR025W,YBR048W	RPS11B SGDID:S000000252,'Protein component of the small (40S) ribosomal subunit; identical to Rps11Ap and has similarity to E. coli S17 and rat S11 ribosomal proteins', Chr II from 332829-332873,333385-333810, Verified ORF
PROTEIN	952	YGL054C	0.9695	4	2	1	MIMALIAESGDDF VQLLDATEIFR	YGL054C	ERV14 SGDID:S000003022,'Protein localized to COPII-coated vesicles, involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p to cell surface; related to Drosophila cornichon', Chr VII from 401290-400874, reverse complement, Verified ORF
PROTEIN	953	YKR058W	0.9249	2	3	1	KGDIETCLIVTTSLFNGTLSELAK NEYHDQWNEVYEEFK NSENLALLER	YKR058W	GLG1 SGDID:S000001766,'Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin', Chr XI from 552412-554262, Verified ORF
PROTEIN	954	YLR295C	0.9971	6	1	1	LAPSTLQDAEGNVKPWNPPQKPNLPELELQGPEALK	YLR295C	ATP14 SGDID:S000004286,'Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr XII from 722375-722001, reverse complement, Verified ORF
PROTEIN	955	YEL026W	1.0000	10	4	1	AFPLADAALTQQILDVVQQAANLR DKIETLLI NVPYVFVPSR PVIAASITTNDASAIK	YEL026W	SNU13 SGDID:S000000752,'RNA binding protein, part of U3 snoRNP involved in rRNA processing, part of U4/U6-U5 tri-snRNP involved in mRNA splicing, similar to human 15.5K protein', Chr V from 101943-102323, Verified ORF
PROTEIN	956	YAL023C	0.9999	10	5	1	DIALGSSVVSIK ESSSISVSEELSSADERDAEDFSK GDEDPEKLHTLTTSFR NQALGGSLLHSHIQTYPDGSNQQQVTCYGYK YLNWFSTWDIADK	YAL023C	PMT2 SGDID:S000000021,'Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt1p, can instead interact with Pmt5p in some conditions; target for new antifungals', Chr I from 108552-106273, reverse complement, Verified ORF
PROTEIN	957	YGL076C	1.0000	387	8	2	HFIQGGSFGNREEFINK IKGINKIPPK ILTPESQLK LIEPYVAYGYPSYSTIR LSNPSGGWGVPR QANNFLWPFK QRVPLSDNAIIEANLGK VPLSDNAIIEANLGK	YPL198W,YGL076C	RPL7A SGDID:S000003044,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Bp and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)', Chr VII from 365999-365989,365529-365436,364967-364338, reverse complement, Verified ORF
PROTEIN	958	YKL152C	1.0000	561	13	1	AIQTANIALEK DLLSGK HLEGISDADIAK KVYPDVLYTSK LLPYWQDVIAK LNIPTGIPLVFELDENLKPSKPSYYLDPEAAAAGAAAVANQGK LWIPVNR NLFTGWVDVK RSFDVPPPPIDASSPFSQK SFDVPPPPIDASSPFSQK TVMIAAHGNSLR VYPDVLYTSK YVDPNVLPETESLALVIDR	YKL152C	GPM1 SGDID:S000001635,'Tetrameric phosphoglycerate mutase, mediates the conversion of 3-phosphoglycerate to 2-phosphoglycerate during glycolysis and the reverse reaction during gluconeogenesis', Chr XI from 164390-163647, reverse complement, Verified ORF
PROTEIN	959	YGR132C	0.9999	13	4	1	PEVLQLPAIYQNLGLDYDER QQVVGEGTHFLVPWLQK VALPIGIIASGIQYSMYDVK VGDGLLLIR	YGR132C	PHB1 SGDID:S000003364,'Subunit of the prohibitin complex (Phb1p-Phb2p), a 1.2 MDa ring-shaped inner mitochondrial membrane chaperone that stabilizes newly synthesized proteins; determinant of replicative life span; involved in mitochondrial segregation', Chr VII from 756457-755594, reverse complement, Verified ORF
PROTEIN	960	YEL003W	1.0000	16	2	1	IIELGHDKDEHTIVIK MIGGALVESDVQTSLPILETK	YEL003W	GIM4 SGDID:S000000729,'Subunit of the heterohexameric cochaperone prefoldin complex which binds specifically to cytosolic chaperonin and transfers target proteins to it', Chr V from 148227-148598, Verified ORF
PROTEIN	961	YHR007C	1.0000	54	10	1	DSASSYSVGEEVDYGFGAISK ELTYDLLQEMPLLNQTIK ELTYDLLQEMPLLNQTIKETLRMHHPLHSLFR GFTPINFVFPNLPLEHYR GVSSPYLPFGGGR LADVSAEAAYAHLTTPVFGK PDVQQELYEEQMRVLDGGK SYVPLIAEEVYK TTGTIDVMVTQPEMTIFTASR TVPPPDFTSMVTLPTGPAK	YHR007C	ERG11 SGDID:S000001049,'Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol to form 4,4''-dimethyl cholesta-8,14,24-triene-3-beta-ol in the ergosterol biosynthesis pathway; member of the cytochrome P450 family', Chr VIII from 121678-120086, reverse complement, Verified ORF
PROTEIN	962	YFR009W	1.0000	34	9	1	AASILYGLGFSTEAQQQPTNSFSGGWR AFLNEVATDIIYQHNER ALFCQPDLLLLDEPSNMLDVPSIAYLAEYLK ALQSVLDADVWR DYILQSADAAGVVK HLGSFGITGTLGLQK HVSILHVEQELR KLDNEREDLDNHLIQISDK LLDINVLK	YFR009W	GCN20 SGDID:S000001905,'Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA', Chr VI from 162482-164740, Verified ORF
PROTEIN	963	YKL009W	0.9999	18	3	1	AGKITIDSPYLVCTEGEKLDVR APLTFTIPEGIVYSR REEEYKENLYQLSK	YKL009W	MRT4 SGDID:S000001492,'Protein involved in mRNA turnover and ribosome assembly, localizes to the nucleolus', Chr XI from 425885-426595, Verified ORF
PROTEIN	964	YJR121W	1.0000	322	17	1	AHGGFSVFTGVGER FLSQPFAVAEVFTGIPGK FTQAGSEVSALLGR GISELGIYPAVDPLDSK IGLFGGAGVGK IINVIGEPIDER IPSAVGYQPTLATDMGLLQER KPIHADPPSFAEQSTSAEILETGIK LLDAAVVGQEHYDVASK LRKPIHADPPSFAEQSTSAEILETGIK LVLEVAQHLGENTVR TIAMDGTEGLVR TVFIQELINNIAK VALVFGQMNEPPGAR VLDTGGPISVPVGR VVDLLAPYAR YDNIPEHAFYMVGGIEDVVAK	YJR121W	ATP2 SGDID:S000003882,'Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis', Chr X from 647523-649058, Verified ORF
PROTEIN	965	YAR015W	1.0000	43	7	1	AEQGEHDENISPAQAAELVGEDLSR ESQEFPEPIFTPSTK ISAYDVIMENSIPEK SLLVHKHKLIPLEVIVR TELDGILPLVAR TIFDYLPAK YIEAYETLTGSK	YAR015W	ADE1 SGDID:S000000070,'N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase, required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine', Chr I from 169370-170290, Verified ORF
PROTEIN	966	YHR072W-A	1.0000	11	2	1	MHLMYTLGPDGK MHLMYTLGPDGKR	YHR072W-A	NOP10 SGDID:S000007455,'Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs, which are required for pseudouridylation and processing of pre-18S rRNA', Chr VIII from 241666-241842, Verified ORF
PROTEIN	967	YNL132W	1.0000	34	8	1	ELNLPSNQTIAMFAK EVNEMDPFESFISNQNIR GTREVNEMDPFESFISNQNIRYVYYK IATNPEYASMGYGSR LFVLLPPIDPK THLDDIFSPFDLK THLDDIFSPFDLKR TVNQAHAILSFIDAISEK	YNL132W	KRE33 SGDID:S000005076,'Essential protein of unknown function; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance', Chr XIV from 375323-378493, Verified ORF
PROTEIN	968	YNL149C	1.0000	4	2	1	QQELFENALEEAK SKDLIDKPDDAATAETTSFGWGK	YNL149C	YNL149C SGDID:S000005093,'Essential protein required for maturation of Gas1p and Pho8p; GFP-fusion protein localizes to the endoplasmic reticulum (ER) and YFP-fusion protein to the nuclear envelope-ER network; null mutants have a cell separation defect', Chr XIV from 349758-349369, reverse complement, Uncharacterized ORF
PROTEIN	969	YDR158W	1.0000	31	7	1	EDPLLDFKMVVLSHNTIIGAAGSGVLIAEILLARNLI EFMEAGIAIVSNAK EQDVPLIVPVVNPEHLDIVAQK IAGVLGATGSVGQR IREDPLLDFK QTIHVLEQPDRPQPR REQDVPLIVPVVNPEHLDIVAQK	YDR158W	HOM2 SGDID:S000002565,'Aspartic beta semi-aldehyde dehydrogenase, catalyzes the second step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis', Chr IV from 770354-771451, Verified ORF
PROTEIN	970	YML022W	1.0000	23	4	1	EYGSDLFEIQK IDYIVGLESR LNAPVFTLLNAQK SKLNAPVFTLLNAQK	YML022W	APT1 SGDID:S000004484,'Adenine phosphoribosyltransferase, catalyzes the formation of AMP from adenine and 5-phosphoribosylpyrophosphate; involved in the salvage pathway of purine nucleotide biosynthesis', Chr XIII from 228937-229500, Verified ORF
PROTEIN	971	SHUFF_YPR158C-D	0.9958	4	3	1	DDHMQTCCGSNFIGNVHNK IQVCHNSFYYDDDSSNNDLR SKGNFAVAFYSDLPPIDGPDLLDETTPPLTDIKNDR	SHUFF_YPR158C-D	YPR158C-D SGDID:S000007362,'TyB Gag-Pol protein; proteolytically processed to make the Gag, RT, PR, and IN proteins that are required for retrotransposition', Chr XVI from 856253-854949,854947-850985, reverse complement, transposable_element_gene
PROTEIN	972	YJR014W	0.9845	23	1	1	LYGTDDNTQEVEAVTNK	YJR014W	YJR014W SGDID:S000003775,'Hypothetical protein', Chr X from 461744-462340, Uncharacterized ORF
PROTEIN	973	YKL150W	1.0000	10	4	1	GSNVVRPYTPVSDLSQK LPTEDSEMGLVLASALFAK MTSHLFGLKPNDTVSFK SITLLGAGTGINPLYQLAHHIVENPNDK	YKL150W	MCR1 SGDID:S000001633,'Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis', Chr XI from 166549-167457, Verified ORF
PROTEIN	974	YDR086C	0.9275	14	1	1	LVEAPVEFVR	YDR086C	SSS1 SGDID:S000002493,'Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) that forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p', Chr IV from 617167-616925, reverse complement, Verified ORF
PROTEIN	975	YKL172W	0.9975	4	2	1	EVAADTEEYQSQALSK RPLDYFAEMVK	YKL172W	EBP2 SGDID:S000001655,'Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly, localizes to the nucleolus; constituent of 66S pre-ribosomal particles', Chr XI from 125764-127047, Verified ORF
PROTEIN	976	YKL067W	1.0000	18	4	1	GDFGIDLGR GLVSQILSR SGPILATVWEGK TILGATNPLGSAPGTIR	YKL067W	YNK1 SGDID:S000001550,'Nucleoside diphosphate kinase, catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate', Chr XI from 314456-314917, Verified ORF
PROTEIN	977	YDR002W	1.0000	66	5	1	EEAAPKPPSSAVFSMFGGK EGDDAPESPDIHFEPVVHLEK KEEAAPKPPSSAVFSMFGGK KEGDDAPESPDIHFEPVVHLEK TMEEDEEVLYK	YDR002W	YRB1 SGDID:S000002409,'Ran GTpase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1', Chr IV from 453042-453647, Verified ORF
PROTEIN	978	SHUFF_YMR219W	0.9995	4	4	1	DTNYDEETNEDGFSVADANVEENEGGMGPPK EFTNDNDVPEANLPTTDQETAEEDR FATDYADVSESSEEEYMNR SSDLESNDTKYDTGANDQYDESK	SHUFF_YMR219W	ESC1 SGDID:S000004832,'Protein localized to the nuclear periphery, involved in telomeric silencing; interacts with PAD4-domain of Sir4p', Chr XIII from 707132-712108, Verified ORF
PROTEIN	979	YGL056C	0.9281	3	1	1	LPETENLSTVIGILGSGVHR	YGL056C	SDS23 SGDID:S000003024,'One of two S. cerevisiae homologs (Sds23p and Sds24p) of the Schizosaccharomyces pombe Sds23 protein, which genetic studies have implicated in APC/cyclosome regulation', Chr VII from 397624-396041, reverse complement, Verified ORF
PROTEIN	980	YML001W	1.0000	10	3	1	NAINVDTAFEEIAR SALQQNQADTEAFEDDYNDAINIR SLGDIPLFLTSAK	YML001W	YPT7 SGDID:S000004460,'GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7', Chr XIII from 267174-267800, Verified ORF
PROTEIN	981	YBR078W	0.9448	11	1	1	VGQSLSIVSNDELSK	YBR078W	ECM33 SGDID:S000000282,'GPI-anchored protein of unknown function, has a possible role in apical bud growth; GPI-anchoring on the plasma membrane crucial to function; similar to Sps2p and Pst1p', Chr II from 393118-393175,393506-394854, Verified ORF
PROTEIN	982	YDL083C	1.0000	65	5	2	FKVYEPLLLVGLDK FSNIDIR TLLIADSR VNGSPITLVEPEILR VYEPLLLVGLDK	YMR143W,YDL083C	RPS16B SGDID:S000002241,'Protein component of the small (40S) ribosomal subunit; identical to Rps16Ap and has similarity to E. coli S9 and rat S16 ribosomal proteins', Chr IV from 307789-307766,307333-306926, reverse complement, Verified ORF
PROTEIN	983	YFL022C	1.0000	137	9	1	EGAQILNEGSYEIK FKPYNFNSQGVQISSGALHPLNK LETDLTSDMVSTNAYK LIQELGQLQIK LQNTDLNELTDETQSILAQIK LQNTDLNELTDETQSILAQIKNNSHLDSIDAK STLATFPQHGSQDVLSALNSLK VLGWGLSLERPTMIK VSLDFIETNPAAR	YFL022C	FRS2 SGDID:S000001872,'Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs1p to form active enzyme; evolutionarily distant from mitochondrial phenylalanyl-tRNA synthetase based on protein sequence, but substrate binding is similar', Chr VI from 95008-93497, reverse complement, Verified ORF
PROTEIN	984	YIL033C	1.0000	7	2	1	QGDQGDYFYVVEK SPFVNEDPHSNVFK	YIL033C	BCY1 SGDID:S000001295,'Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA), a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation', Chr IX from 291668-290418, reverse complement, Verified ORF
PROTEIN	985	YIR036C	0.9447	1	2	1	TVIEEDDECIVYGVARTEAGLQSLQR VPAAVLAQLVLK	YIR036C	YIR036C SGDID:S000001475,'Putative protein of unknown function; sequence similarity with short-chain dehydrogenase/reductase family members; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YIR036C is a non-essential gene', Chr IX from 422862-422071, reverse complement, Uncharacterized ORF
PROTEIN	986	YBR088C	1.0000	39	8	1	DLSQLSDSINIMITK FVADGDIGSGSVIIKPFVDMEHPETSIK IEELQYDSTLSLPSSEFSK ILRCGNNTDTLTLIADNTPDSIILLFEDTK LMDIDADFLK LSSEAPALFQFDLK SGFLQFFLAPK YLLDIIK	YBR088C	POL30 SGDID:S000000292,'Proliferating cell nuclear antigen (PCNA), functions as the sliding clamp for DNA polymerase delta; may function as a docking site for other proteins required for mitotic and meiotic chromosomal DNA replication and for DNA repair', Chr II from 425760-424984, reverse complement, Verified ORF
PROTEIN	987	YHR042W	1.0000	32	10	1	DSILEVLKDELHLDEQEAK GVSTALVGILSR KLDGSFEMVVAHSR LDGSFEMVVAHSRLPNTK LPSNPSTPVIMIGPGTGVAPFR NADGIQLGPFDLSQPYIAPIVK NTDDFLYQDEWPEYAK NTDDFLYQDEWPEYAKK QTVHVTSIVENFPNPELPDAPPVVGVTTNLLR SITTDEATELIK	YHR042W	NCP1 SGDID:S000001084,'NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p', Chr VIII from 190536-192611, Verified ORF
PROTEIN	988	YMR047C	0.9226	2	1	1	ATVTNTVSYPIQPSATK	YMR047C	NUP116 SGDID:S000004650,'Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a repetitive GLFG motif that interacts with mRNA export factor Mex67p and with karyopherin Kap95p; homologous to Nup100p', Chr XIII from 366704-363363, reverse complement, Verified ORF
PROTEIN	989	YER131W	0.9999	33	2	2	DLSEASVYPEYALPK NIVEAAAVR	YGL189C,YER131W	RPS26B SGDID:S000000933,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps26Ap and has similarity to rat S26 ribosomal protein', Chr V from 423948-424307, Verified ORF
PROTEIN	990	YLR314C	1.0000	14	5	1	DYEEELANDQEEEEGQGEGHENQSQEQR LNLNVIDTEGFGDFLNNDQK QLELSINSASPNVNHSPVPTKK TIMNQLIQSNIELFKPPIYSNDDAENSHLSER VEPGLGMGITSSQSEK	YLR314C	CDC3 SGDID:S000004306,'Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM', Chr XII from 764137-762575, reverse complement, Verified ORF
PROTEIN	991	YKL013C	0.9845	2	1	1	HNRPEVEVPNTSAELLLQPMHISR	YKL013C	ARC19 SGDID:S000001496,'Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches', Chr XI from 417666-417151, reverse complement, Verified ORF
PROTEIN	992	YBL030C	1.0000	65	6	1	ESNFLIDFLMGGVSAAVAK GGAR IVAAEGVGSLFK KESNFLIDFLMGGVSAAVAK TATQEGVISFWR YFPTQALNFAFK	YBL030C	PET9 SGDID:S000000126,'Major ADP/ATP carrier of the mitochondrial inner membrane, exchanges cytosolic ADP for mitochondrially synthesized ATP; required for viability in many common lab strains carrying a mutation in the polymorphic SAL1 gene', Chr II from 164000-163044, reverse complement, Verified ORF
PROTEIN	993	YDL100C	0.9998	5	3	1	FLQLPNTLSK LGPMLNSFMGAGNVDISGK MPLCAGEIRGLNNLTKFSQFLNK	YDL100C	GET3 SGDID:S000002258,'ATPase, subunit of the GET complex; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion; involved in resistance to heat and metal stress', Chr IV from 283176-282112, reverse complement, Verified ORF
PROTEIN	994	YIL078W	1.0000	129	14	1	EATSWETTPMDIAK FLAEASMR GYEEVITPNMYNSK IDIMISDALR IYNTLVDLLR LHDAGFYADVDLTGNTLQK MTAILTEHFAGK NATVSVEEVLK NEFSGALSGLTR QQSLYLDPEPTFIEER QVLVVPVGVK TVSQADFPGLEGVAK WGGNWEINAGDGAFYGPK WPFWLSPR	YIL078W	THS1 SGDID:S000001340,'Threonyl-tRNA synthetase, essential cytoplasmic protein', Chr IX from 212496-214700, Verified ORF
PROTEIN	995	YNR053C	1.0000	14	4	1	CDLVPTWVAAAWVK ILDTESYADAFGPK LAASNLEDLVK VEHVTHPEQYIPGVLK	YNR053C	NOG2 SGDID:S000005336,'Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation', Chr XIV from 723113-722304,721772-721122, reverse complement, Verified ORF
PROTEIN	996	YDR071C	1.0000	32	6	1	IPHEYITIESMGK IVLIAHEPLIPFYER KETLIGHIMGTK LQVESSNHIGIHSVVIKPEYQK NLATLLLTDYIQK PLIIEDLK	YDR071C	PAA1 SGDID:S000002478,'Polyamine acetyltransferase; acetylates polyamines such as putrescine, spermidine and spermine; may be involved in transcription and/or DNA replication via regulation of levels of polyamines bound to chromosomal DNA', Chr IV from 589400-588825, reverse complement, Verified ORF
PROTEIN	997	YBL045C	1.0000	40	6	1	AWISLAVEGEPVNSPNYFVAK DFQSYIVSSLPGSTDK LAAQIFGSYNAFEPASR LTISVTDTEVER SLDFLNQSFIQQK VLEHLHSTAFQNTPLSLPTR	YBL045C	COR1 SGDID:S000000141,'Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex), which is a component of the mitochondrial inner membrane electron transport chain', Chr II from 135519-134146, reverse complement, Verified ORF
PROTEIN	998	YPL235W	0.9999	7	3	1	SLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQAR SPHGLPLDLLDR VLAGDVISIDK	YPL235W	RVB2 SGDID:S000006156,'Essential protein involved in transcription regulation; component of chromatin remodeling complexes; required for assembly and function of the INO80 complex; member of the RUVB-like protein family', Chr XVI from 103232-104647, Verified ORF
PROTEIN	999	SHUFF_YNL298W	0.9311	6	3	1	ILQPSTKVDVILSQLRVHK LSCQLVITHR QDMQNESPIRHNNTMTR	SHUFF_YNL298W	CLA4 SGDID:S000005242,'Cdc42p activated signal transducing kinase of the PAK (p21-activated kinase) family, involved in septin ring assembly and cytokinesis; directly phosphorylates septins Cdc3p and Cdc10p; other yeast PAK family members are Ste20p and Skm1p', Chr XIV from 68915-71443, Verified ORF
PROTEIN	1000	YFL010C	1.0000	37	3	1	QQADQAPPPYSSQSTPQVQAGAQAQQPR YYPQQAPMPAAAPQQAYYGTAPSTSK YYQPQQPQYPQYPQQQR	YFL010C	WWM1 SGDID:S000001884,'WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes Gi phase growth arrest and clonal death that is suppressed by overexpression of MCA1', Chr VI from 115737-115102, reverse complement, Verified ORF
PROTEIN	1001	YPL226W	1.0000	102	22	1	DAVPVLTDVATDFKPELAK EEIAAALESVGFDEER EFVKQDFIHNLR FKDLNSFLDDQPKDPNLVASPFGGYFK GSAQVDQSKFEDGGNADAVGLK HFEDVGLDSEIANHTPLGSLSGGQLVK IGYIAQHALQHVNEHK ILTVDSNVNDWK LEDFLTAVFGGSDSQR LIVDTLQDPSKVPESVK LLTGELVPNEGK LLTGELVPNEGKVEK LSNLELTPISQFLSK LTLEEGRDFLLDHLK LVNNRNEIESFIPLLLPGIQK NEIESFIPLLLPGIQK QSAVTPNQSGTPTPSASTTSLTSLNEK QTVIVVENLTR SYYTLTDSNAQMR TANQYLQWR TLLDYVSILDNLDLSPR YIEWLSSPK	YPL226W	NEW1 SGDID:S000006147,'ATP binding cassette family member; Asn/Gln-rich rich region supports [NU+] prion formation, susceptibility to [PSI+] prion induction and aggregation of a fragment of the human Machado-Joseph Disease protein', Chr XVI from 121767-125357, Verified ORF
PROTEIN	1002	YHR146W	1.0000	12	3	1	AKKDEEVFTLDPIVNK LNKKEEVPEPVAGPIVESSVTEK SPALPQADDPIVETK	YHR146W	CRP1 SGDID:S000001189,'Protein that binds to cruciform DNA structures', Chr VIII from 390303-391700, Verified ORF
PROTEIN	1003	YIL103W	0.9265	3	2	1	FHLESAMIHNPEIPAFK NLIAAGKTVVKIILSEVFPQK	YIL103W	DPH1 SGDID:S000001365,'Protein required, along with Dph2p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide, which is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); may act in a complex with Dph2p and Kti11p', Chr IX from 171748-173025, Verified ORF
PROTEIN	1004	YJR017C	0.9336	8	1	1	VGEVSDIVESGSGVHVIK	YJR017C	ESS1 SGDID:S000003778,'Peptidylprolyl-cis/trans-isomerase (PPIase) specific for phosphorylated serine and threonine residues N-terminal to proline; regulates phosphorylation of the RNA polymerase II large subunit (Rpo21p) C-terminal domain', Chr X from 466948-466436, reverse complement, Verified ORF
PROTEIN	1005	YKR048C	1.0000	47	8	1	AQAQEQDDKIGTINEEDILANQPLLLQSIQDR GQEIVESLNETELLVDEEEKAQNDSEEEQVK IQNEDQDEELEEDLEER ITPIESFFNFFDPPK LALDYSIGEQLK LALDYSIGEQLKDK LGSLVGQDSGYVGGLPK SSMQIDNAPTPHNTPASVLNPSYLK	YKR048C	NAP1 SGDID:S000001756,'Protein that interacts with mitotic cyclin Clb2p; required for the regulation of microtubule dynamics during mitosis; controls bud morphogenesis; involved in the transport of H2A and H2B histones to the nucleus', Chr XI from 526282-525029, reverse complement, Verified ORF
PROTEIN	1006	YMR099C	1.0000	43	7	1	ENPPTVQFGLKPEIANPELTK ETDKEVVLTHPADETTSVHILK GGIPLVFPVFGK IEDIEGTMVSNLAGMK LKSEEQLWLSTAAK NSTWEFLGQTK YNLPDTVVWNPWIEK	YMR099C	YMR099C SGDID:S000004705,'Hypothetical protein', Chr XIII from 464826-463933, reverse complement, Uncharacterized ORF
PROTEIN	1007	YKL212W	1.0000	20	8	1	ELYGDNYLVNLVNQK GHELPVKEGYESVVHALNDPK IDSFIQPVIYGYAK LGAFNDFLNSASR TNVVQSVLAQWVLQK TVDAVLNATPIVLGLITR YKPNLVLGENSLDATKK YYQNNWTDGPR	YKL212W	SAC1 SGDID:S000001695,'Lipid phosphoinositide phosphatase of the ER and Golgi, involved in protein trafficking and secretion', Chr XI from 34544-36415, Verified ORF
PROTEIN	1008	YPL082C	0.9987	10	4	1	HLQPILHLLNTPVGEK QLYMDFTKKQK RAVLNLLIAFLSIKDDSTK TDDIKQETSMLNASDKANENK	YPL082C	MOT1 SGDID:S000006003,'Essential abundant protein involved in regulation of transcription, removes Spt15p (TBP) from DNA via its C-terminal ATPase activity, forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity', Chr XVI from 404080-398477, reverse complement, Verified ORF
PROTEIN	1009	YLR389C	0.9853	4	2	1	ILSHLIGHEGSGSLLAHLK TFNLDFLKPDLDER	YLR389C	STE23 SGDID:S000004381,'Metalloprotease involved, with homolog Axl1p, in N-terminal processing of pro-a-factor to the mature form; member of the insulin-degrading enzyme family', Chr XII from 902660-899577, reverse complement, Verified ORF
PROTEIN	1010	YEL071W	1.0000	46	6	1	DLYSVSAAVTER GQSNLILLPNSTDK HDDEKLTAFLKDTTDSK LAVVPQGGNTDLVGASVPVFDEIVLSLR LNAAGLIGDAPKPVVK VLDSEDLAYFR	YEL071W	DLD3 SGDID:S000000797,'D-lactate dehydrogenase, part of the retrograde regulon which consists of genes whose expression is stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source, located in the cytoplasm', Chr V from 16355-17845, Verified ORF
PROTEIN	1011	YKL148C	1.0000	12	3	1	AVAHTVADTLQPGLPHKPLPSDLGK LGANSLLDLVVFGR WNGEALTIDEETGEDK	YKL148C	SDH1 SGDID:S000001631,'Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone', Chr XI from 171134-169212, reverse complement, Verified ORF
PROTEIN	1012	YKL058W	0.9845	13	1	1	STIGNSLVDALDTLISDGR	YKL058W	TOA2 SGDID:S000001541,'TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; homologous to smallest subunit of human and Drosophila TFIIA', Chr XI from 329810-330178, Verified ORF
PROTEIN	1013	YOR367W	0.9845	6	1	1	HTDRFPVLGPQLSTK	YOR367W	SCP1 SGDID:S000005894,'Component of yeast cortical actin cytoskeleton, binds and cross links actin filaments; originally identified by its homology to calponin (contains a calponin-like repeat) but the Scp1p domain structure is more similar to transgelin', Chr XV from 1026005-1026607, Verified ORF
PROTEIN	1014	YHR203C	1.0000	187	10	2	DSLDNTFVTR ESLPLIVFLR HDGGFDLVHIK HDGGFDLVHIKDSLDNTFVTR LAAPHHWLLDK LNNVFVIGEQGK LNNVFVIGEQGKPYISLPK LRESLPLIVFLR LVYVTGGR TDTTYPAGFMDVITLDATNENFR	YHR203C,YJR145C	RPS4B SGDID:S000001246,'Protein component of the small (40S) ribosomal subunit; identical to Rps4Bp and has similarity to rat S4 ribosomal protein', Chr VIII from 505530-505517,505247-504476, reverse complement, Verified ORF
PROTEIN	1015	YJR109C	1.0000	44	15	1	ATGYPLAYTAAK DINIPIAESFACETVDEALEAAER EYLGQVASIVATIGYR IGLGYTLPELPNPITK ITGPFNMQIIK LAGADPFLGVEMASTGEVASFGR LTLASDVSPDHPVVMSK NAIDFAIPLFNEPQTALLFAK QVDPSLLGFQGSTEFGDQLDEALR RIDTLAAEFPAQTNYLYTTYNATK SAYALGGLGSGFANNASEMK TLITSEDRDLFASALK TTVANFEPSLDYIVAK VLAIGQALIHENYTVER VPQFSFTR	YJR109C	CPA2 SGDID:S000003870,'Large subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulline, an arginine precursor', Chr X from 632857-629501, reverse complement, Verified ORF
PROTEIN	1016	YDR454C	1.0000	115	10	1	DYNFVSVDEFK ELKDFIFAEK FLFIAPPSVEDLK FLFIAPPSVEDLKK KLFAEYPDSFGFSVSSTTR LFAEYPDSFGFSVSSTTR LSAAQAELAYAETGAHDK LSAAQAELAYAETGAHDKVIVNDDLDK LSAAQAELAYAETGAHDKVIVNDDLDKAYK RLSAAQAELAYAETGAHDKVIVNDDLDK	YDR454C	GUK1 SGDID:S000002862,'Guanylate kinase, converts GMP to GDP; required for growth and mannose outer chain elongation of cell wall N-linked glycoproteins', Chr IV from 1366819-1366256, reverse complement, Verified ORF
PROTEIN	1017	YLR420W	1.0000	31	3	1	AAVSGKPYFFFGSDSAPHPVQNK DLTPDLIHEAAQQHAIR PYFFFGSDSAPHPVQNK	YLR420W	URA4 SGDID:S000004412,'Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines, converting carbamoyl-L-aspartate into dihydroorotate', Chr XII from 963782-964876, Verified ORF
PROTEIN	1018	YNL151C	0.9999	4	2	1	RKPNIILDEDDTNDGIER TGEGEDDDLADDDFEEDEDEEDDDDYNAEK	YNL151C	RPC31 SGDID:S000005095,'RNA polymerase III subunit C31; contains HMG-like C-terminal domain', Chr XIV from 348523-347768, reverse complement, Verified ORF
PROTEIN	1019	YJR117W	1.0000	5	3	1	LPPVLEDEIDDETFHK LTALDYVSEK SSHSNAYFTGLPFTSK	YJR117W	STE24 SGDID:S000003878,'Highly conserved zinc metalloprotease that functions in two steps of a-factor maturation, C-terminal CAAX proteolysis and the first step of N-terminal proteolytic processing; contains multiple transmembrane spans', Chr X from 641923-643284, Verified ORF
PROTEIN	1020	YKR014C	0.9350	1	2	1	NANAALVVYDITQEDSLQK QYAQEQGLLFR	YKR014C	YPT52 SGDID:S000001722,'GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5; required for vacuolar protein sorting and endocytosis', Chr XI from 465714-465010, reverse complement, Verified ORF
PROTEIN	1021	YDR487C	1.0000	35	4	1	HGIPLISIEELAQYLKK LSGLSPVAVIGELVNDDEQGTMMR MFTPIDQAIEHFK SMTCR	YDR487C	RIB3 SGDID:S000002895,'3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis from ribulose-5-phosphate, also has an unrelated function in mitochondrial respiration', Chr IV from 1428972-1428346, reverse complement, Verified ORF
PROTEIN	1022	YLR342W	1.0000	112	18	1	AMEEANPEDTEETLNKIEGDNSLEAADFR APTFFVSQDDNNFETEFFPR AYPDLQIAYLDEEPPLTEGEEPR DLGFGTILNFTTK EQTFGTLFAR EQTFGTLFARTLSQIGGKLHYGHPDFINATFMTTR FKPHELENAEFLLR GMGYMAWTQPSR IGAGMGEQMLSR ILAEETAAYEGNENEAEKEDALK IVGYDDLNQLFWYPEGIAK LGDVVWDDVFFK LIELPLEER MSPDQALLSLHADYIGGDTANYKK SVLAEFEELNVEQVNPYAPGLR VENPEIVQMFGGNAEGLER VITPIYHFIR VTLLEYLK	YLR342W	FKS1 SGDID:S000004334,'Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling', Chr XII from 809997-815627, Verified ORF
PROTEIN	1023	YFR052W	1.0000	10	4	1	ALLFFNNEKETEK AWDLLQSGSQNISEFDSFTDILK NLEDDSLLSYPIK NTELSYDFLPLSNIK	YFR052W	RPN12 SGDID:S000001948,'Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, which is an ATPase component of the 19S regulatory particle; physically interacts with Nob1p and Rpn3p', Chr VI from 252492-253316, Verified ORF
PROTEIN	1024	SHUFF_YLR382C	0.9580	2	2	1	ESDEFEK KLEVDGFMDDMGKDDCEEK	SHUFF_YLR382C	NAM2 SGDID:S000004374,'Mitochondrial leucyl-tRNA synthetase, also has a direct role in splicing of several mitochondrial group I introns; indirectly required for mitochondrial genome maintenance', Chr XII from 884751-882067, reverse complement, Verified ORF
PROTEIN	1025	YFL014W	1.0000	7	1	1	GVFQGVHDSAEKGKDNAEGQGESLADQAR	YFL014W	HSP12 SGDID:S000001880,'Plasma membrane localized protein that protects membranes from desiccation; induced by heat shock, oxidative stress, osmostress, stationary phase entry, glucose depletion, oleate and alcohol; regulated by the HOG and Ras-Pka pathways', Chr VI from 107250-107579, Verified ORF
PROTEIN	1026	YDR155C	1.0000	171	7	1	GFGYAGSPFHR HVVFGEVVDGYDIVK HVVFGEVVDGYDIVKK LYNDIVPK SIYGGKFPDENFK SIYGGKFPDENFKK VIPDFMLQGGDFTAGNGTGGK	YDR155C	CPR1 SGDID:S000002562,'Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds the drug cyclosporin A', Chr IV from 768997-768509, reverse complement, Verified ORF
PROTEIN	1027	YHR049W	1.0000	26	6	1	ANGPYDGIVGFSQGAALSSIITNK DIIRPIVEQITSSLQEASE EKVLAYEHPGGHMVPNK FRDSFAVKPDMK ISELVPDHPQFK LLFLHGFLQNGK	YHR049W	FSH1 SGDID:S000001091,'Serine hydrolase that localizes to both the nucleus and cytoplasm; sequence is similar to Fsh2p and Fsh3p', Chr VIII from 206455-207186, Verified ORF
PROTEIN	1028	YER086W	1.0000	38	11	1	FLGGLSDSWNLTLFHYRNHGADIGKVLAGISVPPR IIGVETYDAATLHNSLQR IISFEFPERPGALTR LDELQTDNTPDYVR LHSELKLDELQTDNTPDYVR NTYVPILSGANMNFDR QVMQQLNALGFEAVDISDNELAK REDLLPVFSFK SIVEPSGALSVAGMK SSVYDVINESPISQGVGLSSR TPLPVVGTFADGTSVR	YER086W	ILV1 SGDID:S000000888,'Threonine deaminase, catalyzes the first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation', Chr V from 328473-330203, Verified ORF
PROTEIN	1029	YDR529C	0.9665	1	1	1	FDDLIAEENPIMQTALR	YDR529C	QCR7 SGDID:S000002937,'Subunit 7 of the ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial inner membrane electron transport chain; oriented facing the mitochondrial matrix; N-terminus appears to play a role in complex assembly', Chr IV from 1496540-1496157, reverse complement, Verified ORF
PROTEIN	1030	YBR072W	1.0000	50	6	1	EVARPNNYAGALYDPR KIEVSSQESWGN NQILVSGEIPSTLNEESKDK NQILVSGEIPSTLNEESKDKVK SVAVPVDILDHDNNYELK VITLPDYPGVDADNIK	YBR072W	HSP26 SGDID:S000000276,'Small heat shock protein with chaperone activity that is regulated by a heat induced transition from an inactive oligomeric (24-mer) complex to an active dimer; induced by heat, upon entry into stationary phase, and during sporulation', Chr II from 382027-382671, Verified ORF
PROTEIN	1031	SHUFF_YPL057C	0.9845	1	1	1	LGLFYGLILLFALNWLLPLIK	SHUFF_YPL057C	SUR1 SGDID:S000005978,'Probable catalytic subunit of a mannosylinositol phosphorylceramide (MIPC) synthase, forms a complex with probable regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p', Chr XVI from 453054-451906, reverse complement, Verified ORF
PROTEIN	1032	YPL117C	0.9068	19	1	1	LVQNQTPEDILEEFPEIIPLQQRPNTR	YPL117C	IDI1 SGDID:S000006038,'Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase), catalyzes an essential activation step in the isoprenoid biosynthetic pathway; required for viability', Chr XVI from 328729-327863, reverse complement, Verified ORF
PROTEIN	1033	YOR311C	1.0000	6	1	1	VTIPAKEEISSSDDDAHVPVTEIHLK	YOR311C	HSD1 SGDID:S000005838,'Endoplasmic reticulum (ER)-resident membrane protein, overproduction induces enlargement of ER-like membrane structures and suppresses a temperature-sensitive sly1 mutation', Chr XV from 899925-899053, reverse complement, Verified ORF
PROTEIN	1034	YEL051W	0.9974	6	1	1	RVNAIEHVIIPR	YEL051W	VMA8 SGDID:S000000777,'Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis', Chr V from 58378-59148, Verified ORF
PROTEIN	1035	YMR165C	1.0000	3	5	1	ASSAAATSIDKEFKK NSETTGSLSPTESSTTTPPDSVEER SLYFEDSDNEVDTEEK VSDEFDDDEFDEDEFED YLDDMDDEDSNYNRTK	YMR165C	PAH1 SGDID:S000004775,'Mg(sup)2+(/sup)-dependent phosphatidate (PA) phosphatase, catalyzes the dephosphorylation of PA to yield diacylglycerol and P(sub)i(/sub), responsible for de novo lipid synthesis; homologous to mammalian lipin 1', Chr XIII from 592627-590039, reverse complement, Verified ORF
PROTEIN	1036	YLR448W	1.0000	62	8	1	ASLVPGTVLILLAGR EANLFPEQQTK FNVEYFAK HLEDNTLLVTGPFK LRASLVPGTVLILLAGRFR QYLSASFSLK VSVEGVNVEK WYPSEDVAAPK	YLR448W	RPL6B SGDID:S000004440,'Protein component of the large (60S) ribosomal subunit, has similarity to Rpl6Bp and to rat L6 ribosomal protein; binds to 5.8S rRNA', Chr XII from 1028850-1028864,1029249-1029764, Verified ORF
PROTEIN	1037	YFR051C	0.9880	3	2	1	AFPANDQSLGVLR VLELLSNFQNLVSEISSDHTFVEDK	YFR051C	RET2 SGDID:S000001947,'Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER', Chr VI from 251790-250150, reverse complement, Verified ORF
PROTEIN	1038	YDL022W	1.0000	22	4	1	FGQMFFPESR NLPDMIEELDLHED VTVIGSGNWGTTIAK YLPGITLPDNLVANPDLIDSVK	YDL022W	GPD1 SGDID:S000002180,'NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis, essential for growth under osmotic stress; expression regulated by high-osmolarity glycerol response pathway; homolog of Gpd2p', Chr IV from 411822-412997, Verified ORF
PROTEIN	1039	YBR189W	1.0000	240	11	1	HIDFAPTSPFGGAR HIDFAPTSPFGGARPGR KAEASGEAAEEAEDEE KLDYVLALK LAGEFGLK LDSEKHIDFAPTSPFGGAR LDSEKHIDFAPTSPFGGARPGR LDYVLALK LFEGNALIR QIVNIPSFMVR RLFEGNALIR	YBR189W	RPS9B SGDID:S000000393,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps9Bp and has similarity to E. coli S4 and rat S9 ribosomal proteins', Chr II from 604503-604509,604923-605503, Verified ORF
PROTEIN	1040	YML126C	1.0000	58	8	1	ANPQLFPEVDAELATR GAARPTGGAGTVAMWIGPDAPIVFDSVR GLVSDPAGSDALNVLK ITETPKDYEAAIELR LEVGTETLIDK LLYNDFR NFKPQGSIEHLQSGVYYLTNIDDK TFVNVAKPFHK	YML126C	ERG13 SGDID:S000004595,'3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-CoA and acetoacetyl-CoA; involved in the second step in mevalonate biosynthesis', Chr XIII from 20536-19061, reverse complement, Verified ORF
PROTEIN	1041	YOR327C	0.9922	3	2	1	LTSIEDKADNLAISAQGFK QEIDDTVGIMR	YOR327C	SNC2 SGDID:S000005854,'Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins', Chr XV from 931078-930731, reverse complement, Verified ORF
PROTEIN	1042	YDR234W	1.0000	18	5	1	DALAYLASPAVVAASAVLGK IKNPSQIVTTLDHDIQNK ISSPAEVLSTSEIPFSGVK LTIANMTTEWGALSGLFPVDK QSVEILEGFPR	YDR234W	LYS4 SGDID:S000002642,'Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway', Chr IV from 931125-933206, Verified ORF
PROTEIN	1043	YHL021C	1.0000	9	1	1	STVHGEGTFDVNASQATSVNAHYANK	YHL021C	YHL021C SGDID:S000001013,'The authentic, non-tagged protein was localized to the mitochondria', Chr VIII from 65856-64459, reverse complement, Uncharacterized ORF
PROTEIN	1044	YKR016W	0.9519	1	2	1	NGRLAHLEEINSEVNDLSKSIDR TGNPSNATDFDSVYAR	YKR016W	YKR016W SGDID:S000001724,'The authentic, non-tagged protein was localized to the mitochondria', Chr XI from 469360-470982, Uncharacterized ORF
PROTEIN	1045	YPR133C	0.9995	8	4	1	ANLADTILDNNLLQSVR IWLEPLPDGSLPSFEIQK NEEAAIDENSNVEAAER YAPVSNLSAVPTNAR	YPR133C	SPN1 SGDID:S000006337,'Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II, probable transcriptional elongation factor; metazoan homologs contain an acidic N terminus; mutations in the gene confer an Spt- phenotype', Chr XVI from 797206-795974, reverse complement, Verified ORF
PROTEIN	1046	YHR074W	0.9548	5	1	1	MDSLVSSVVSLFEVATGK	YHR074W	QNS1 SGDID:S000001116,'Glutamine-dependent NAD(+) synthetase, essential for the formation of NAD(+) from nicotinic acid adenine dinucleotide', Chr VIII from 246195-248339, Verified ORF
PROTEIN	1047	YCL059C	1.0000	5	1	1	AKDFIAPEEEAYKPNQN	YCL059C	KRR1 SGDID:S000000564,'Essential nucleolar protein required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit', Chr III from 23379-22429, reverse complement, Verified ORF
PROTEIN	1048	YER003C	1.0000	106	10	1	DIIDKFHATNELPFLFK FHATNELPFLFK HFEGVDGPSILITTK IGSSSAVAQFAAHSDPSVQIEQDKPYAELWMGTHSK LDAGYQQYDWGK LNAGEAIFLR NLVSMLTYTYDPVEK NSPSDFNKPDLPELIQR SKNSPSDFNKPDLPELIQR SVLYNPPIEEFAVLETTFDEK	YER003C	PMI40 SGDID:S000000805,'Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P; required for early steps in protein mannosylation', Chr V from 159117-159087,158993-157735, reverse complement, Verified ORF
PROTEIN	1049	YFL039C	1.0000	391	14	1	APEALFHPSVLGLESAGIDQTTYNSIMK AVFPSIVGR AVFPSIVGRPR DLTDYLMK EITALAPSSMK ELYGNIVMSGGTTMFPGIAER FRAPEALFHPSVLGLESAGIDQTTYNSIMK GYSFSTTAER IWHHTFYNELR KELYGNIVMSGGTTMFPGIAER SYELPDGQVITIGNER TTGIVLDSGDGVTHVVPIYAGFSLPHAILR VAPEEHPVLLTEAPMNPK YPIEHGIVTNWDDMEK	YFL039C	ACT1 SGDID:S000001855,'Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions', Chr VI from 54695-54686,54377-53260, reverse complement, Verified ORF
PROTEIN	1050	YPL091W	1.0000	29	8	1	AIFPENIPGFELGTDSDGFFR DNTTEVYSANHILVATGGK HYDYLVIGGGSGGVASAR KVMWYASDLATR LNSHDQIIADEYQNTNVPNIYSLGDVVGK SIDDVDELIWTIGR VELTPVAIAAGR VVGLHIVGDSSAEILQGFGVAIK	YPL091W	GLR1 SGDID:S000006012,'Cytosolic and mitochondrial glutathione oxidoreductase, converts oxidized glutathione to reduced glutathione', Chr XVI from 375499-376950, Verified ORF
PROTEIN	1051	YCL011C	0.9995	10	3	1	FDGALFMDR REDLEDTRGTEPGLAQDAAVHIDETAAK SDLFDLFGPIGK	YCL011C	GBP2 SGDID:S000000517,'Poly(A+) RNA-binding protein, involved in the export of mRNAs from the nucleus to the cytoplasm; similar to Hrb1p and Npl3p; also binds single-stranded telomeric repeat sequence in vitro', Chr III from 103358-102075, reverse complement, Verified ORF
PROTEIN	1052	YPL059W	1.0000	10	4	1	AIEDAIESAPVVLFMK ATIGLLGNQGVDPAK FAAYNVLEDPELR SGELADLLEEAQALVPEEEEETKDR	YPL059W	GRX5 SGDID:S000005980,'Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; mitochondrial matrix protein involved in the synthesis/assembly of iron-sulfur centers; monothiol glutaredoxin subfamily member along with Grx3p and Grx4p', Chr XVI from 444576-445028, Verified ORF
PROTEIN	1053	YDL174C	0.9996	3	2	1	EYLLEELGEAPVDLMR SPNIVNALVDEVK	YDL174C	DLD1 SGDID:S000002333,'D-lactate dehydrogenase, oxidizes D-lactate to pyruvate, transcription is heme-dependent, repressed by glucose, and derepressed in ethanol or lactate; located in the mitochondrial inner membrane', Chr IV from 147590-145827, reverse complement, Verified ORF
PROTEIN	1054	YBR261C	0.9845	14	1	1	ENNTPTDTDDFDETDSSVTR	YBR261C	YBR261C SGDID:S000000465,'Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YBR261C is not an essential gene', Chr II from 735525-734827, reverse complement, Uncharacterized ORF
PROTEIN	1055	YEL034W	1.0000	128	5	1	APEGELGDSLQTAFDEGK KLEDLSPSTHNMEVPVVK KLEDLSPSTHNMEVPVVKR LEDLSPSTHNMEVPVVK VHLVAIDIFTGK	YEL034W	HYP2 SGDID:S000000760,'Translation initiation factor eIF-5A, promotes formation of the first peptide bond; similar to and functionally redundant with Anb1p; undergoes an essential hypusination modification; expressed under aerobic conditions', Chr V from 85676-86149, Verified ORF
PROTEIN	1056	YHR135C	1.0000	13	2	1	LQEQQLQEQQLQQQQQQQQQLR STNVYDLAQGLPVQFGR	YHR135C	YCK1 SGDID:S000001177,'Palmitoylated, plasma membrane-bound casein kinase I isoform; shares redundant functions with Yck2p in morphogenesis, proper septin assembly, endocytic trafficking; provides an essential function overlapping with that of Yck2p', Chr VIII from 374313-372697, reverse complement, Verified ORF
PROTEIN	1057	SHUFF_YJL212C	0.9622	3	3	1	LAYCIILVSLLILVVVDQNIFLR LYLWSVAVLSPATNGAFLTVQGVKCDPLAVLLVVVK NGELLIQWLMPAPFSEINGNQFMNR	SHUFF_YJL212C	OPT1 SGDID:S000003748,'Plasma membrane transporter that transports tetra- and pentapeptides and glutathione; member of the OPT family', Chr X from 36249-33850, reverse complement, Verified ORF
PROTEIN	1058	YGR285C	1.0000	128	9	1	ATTIDEQVGLIVDSLNDEELVSTADK ATTIDEQVGLIVDSLNDEELVSTADKIK LPSSLLSYFV QSAAGGSLDQDGFFK TADLYAAMGLSK TFEFLDEDVPDDSSNR TIVDSGKLPSSLLSYFV TVDESNVDPDELLFDTELADEDLLTHDAR YHPDKQSAAGGSLDQDGFFK	YGR285C	ZUO1 SGDID:S000003517,'Cytosolic ribosome-associated chaperone that acts, together with Ssz1p and the Ssb proteins, as a chaperone for nascent polypeptide chains; contains a DnaJ domain and functions as a J-protein partner for Ssb1p and Ssb2p', Chr VII from 1063159-1061858, reverse complement, Verified ORF
PROTEIN	1059	YJR133W	0.9267	2	2	1	MYISYNNIHK VLIVDEVDDTR	YJR133W	XPT1 SGDID:S000003894,'Xanthine-guanine phosphoribosyl transferase, required for xanthine utilization and for optimal utilization of guanine', Chr X from 672907-673536, Verified ORF
PROTEIN	1060	YOR021C	1.0000	8	4	1	FIDYPEFR FIDYPEFRFNKNEATEMPFR FNKNEATEMPFR TAYPNLLISR	YOR021C	YOR021C SGDID:S000005547,'Hypothetical protein', Chr XV from 373439-372798, reverse complement, Uncharacterized ORF
PROTEIN	1061	YPL010W	0.9766	6	2	1	VSKPPTNEPQMALDLDK VSKPPTNEPQMALDLDKGFLGAWGFAK	YPL010W	RET3 SGDID:S000005931,'Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER', Chr XVI from 535015-535584, Verified ORF
PROTEIN	1062	YOR056C	0.9845	2	1	1	DSGEDTTGSLGVEASEEDR	YOR056C	NOB1 SGDID:S000005582,'Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits; required for cleavage of the 20S pre-rRNA to generate the mature 18S rRNA', Chr XV from 431628-430249, reverse complement, Verified ORF
PROTEIN	1063	YLR300W	1.0000	10	1	1	YYDYDHGSLGEPIR	YLR300W	EXG1 SGDID:S000004291,'Major exo-1,3-beta-glucanase of the cell wall, involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes', Chr XII from 728957-730303, Verified ORF
PROTEIN	1064	SHUFF_YNL041C	0.9948	3	2	1	DEQSCCEMESISGNNYFPDSK LIENLLTVLDVDLILNILVIAYELLNKSK	SHUFF_YNL041C	COG6 SGDID:S000004986,'Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments', Chr XIV from 551988-549469, reverse complement, Verified ORF
PROTEIN	1065	YDL173W	0.9999	4	1	1	GGAGNIFHDPHLTR	YDL173W	YDL173W SGDID:S000002332,'Hypothetical protein', Chr IV from 148192-149079, Uncharacterized ORF
PROTEIN	1066	YCR009C	1.0000	12	1	1	AVTASQTTIAEVISNLYDDSK	YCR009C	RVS161 SGDID:S000000602,'Amphiphysin-like lipid raft protein; subunit of a complex (Rvs161p-Rvs167p) that regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress', Chr III from 131540-130743, reverse complement, Verified ORF
PROTEIN	1067	YOR207C	0.9984	5	2	1	LTDEINTAQDKWHLLPAFLK SVPTNSADAPNPNNVNVQTQYR	YOR207C	RET1 SGDID:S000005733,'Second-largest subunit of RNA polymerase III, which is responsible for the transcription of tRNA and 5S RNA genes, and other low molecular weight RNAs', Chr XV from 733458-730009, reverse complement, Verified ORF
PROTEIN	1068	YKL040C	0.9999	11	3	1	FELTEEDEEVSELIEELIDTR FLSTDGEMLQTR IRPAILEDGGDIDYR	YKL040C	NFU1 SGDID:S000001523,'Protein involved in iron metabolism in mitochondria; similar to NifU, which is a protein required for the maturation of the Fe/S clusters of nitrogenase in nitrogen-fixing bacteria', Chr XI from 361471-360701, reverse complement, Verified ORF
PROTEIN	1069	YML076C	0.9845	1	1	1	LEPILITSLPLFHTSRIIYTVGMLLLK	YML076C	WAR1 SGDID:S000004541,'Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively', Chr XIII from 115347-112513, reverse complement, Verified ORF
PROTEIN	1070	YLR134W	0.9859	17	6	1	NATFPGVQMK PVYLGLPANLVDLNVPAK QLLLHHTLGNGDFTVFHR TTYTTQRPVYLGLPANLVDLNVPAK WAGNANELNAAYAADGYAR YLFER	YLR134W	PDC5 SGDID:S000004124,'Minor isoform of pyruvate decarboxylase, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde, regulation is glucose- and ethanol-dependent, repressed by thiamine, involved in amino acid catabolism', Chr XII from 410724-412415, Verified ORF
PROTEIN	1071	YBR142W	0.9635	1	1	1	WQNTVPLLPIETDILSQLR	YBR142W	MAK5 SGDID:S000000346,'Essential nucleolar protein, putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits', Chr II from 528311-530632, Verified ORF
PROTEIN	1072	YMR011W	1.0000	16	2	1	GLTLEEVNEMYVEGVKPWKSGSWISK VTIEDPSIVAEMDTIMANVETER	YMR011W	HXT2 SGDID:S000004613,'High-affinity glucose transporter of the major facilitator superfamily, expression is induced by low levels of glucose and repressed by high levels of glucose', Chr XIII from 288078-289703, Verified ORF
PROTEIN	1073	YOR291W	0.9583	3	4	1	ALDIITIVVPPALPATLTIGTNFALSRLK ILVPLLISVFLVFLFQFIPWIIVQK LGENSDTGFVYHSATHSSSSLSR NFEFIVDITVSIGASLLLMTLDTESYLGK	YOR291W	YOR291W SGDID:S000005817,'Hypothetical protein', Chr XV from 861174-865592, Uncharacterized ORF
PROTEIN	1074	YCL009C	1.0000	28	5	1	EKQFHPANLPASEVLR HATRPPLPTLDTPSWNANSAVSSIIYETPAPSR LKHEHLNDITNLTNNFGGR MTIVLQGQDGVVEQAR QFHPANLPASEVLR	YCL009C	ILV6 SGDID:S000000515,'Regulatory subunit of acetolactate synthase, which catalyzes the first step of branched-chain amino acid biosynthesis; enhances activity of the Ilv2p catalytic subunit, localizes to mitochondria', Chr III from 105548-104619, reverse complement, Verified ORF
PROTEIN	1075	YBL072C	1.0000	269	7	2	AAIVQIDATPFR IAGVVYHPSNNELVR IESSVESQFSAGR IETGNFSWASEGISK IETGNFSWASEGISKK PGQSGR QWFEAHYGQTLGK	YER102W,YBL072C	RPS8A SGDID:S000000168,'Protein component of the small (40S) ribosomal subunit; identical to Rps8Ap and has similarity to rat S8 ribosomal protein', Chr II from 89123-88521, reverse complement, Verified ORF
PROTEIN	1076	YKL060C	1.0000	829	13	1	DYIMSPVGNPEGPEKPNK DYIMSPVGNPEGPEKPNKK EEKPLFLVFHGGSGSTVQEFHTGIDNGVVK FAIPAINVTSSSTAVAALEAAR FFDPR GAIAAAHYIR GISNEGQNASIK KDYIMSPVGNPEGPEKPNK KTGVIVGEDVHNLFTYAK LLPWFDGMLEADEAYFK MAAMDQWLEMEIGITGGEEDGVNNENADKEDLYTK SPIILQTSNGGAAYFAGK TGVIVGEDVHNLFTYAK	YKL060C	FBA1 SGDID:S000001543,'Fructose 1,6-bisphosphate aldolase, a cytosolic enzyme required for glycolysis and gluconeogenesis; catalyzes the conversion of fructose 1,6 bisphosphate into two 3-carbon products: glyceraldehyde-3-phosphate and dihydroxyacetone phosphate', Chr XI from 327131-326052, reverse complement, Verified ORF
PROTEIN	1077	YPR058W	0.9999	3	1	1	DLLAGTAGGIAQVLVGQPFDTTK	YPR058W	YMC1 SGDID:S000006262,'Putative mitochondrial inner membrane transporter, member of the mitochondrial carrier (MCF) family', Chr XVI from 673748-674671, Verified ORF
PROTEIN	1078	YBR185C	0.9845	2	1	1	NLPNVFAHPLIVANALIRR	YBR185C	MBA1 SGDID:S000000389,'Protein involved in assembly of mitochondrial respiratory complexes; may act as a receptor for proteins destined for export from the mitochondrial matrix to the inner membrane', Chr II from 599954-599118, reverse complement, Verified ORF
PROTEIN	1079	SHUFF_YLR106C	0.9025	1	5	1	EVKDEIEEIFR LKIFALRIVDIDITFQLPALNISPPTK NSGFSTSITSVLIQLLKVFLIHLLSK SLMVSRQELPITPLQQLENK YSLEGDDLFSVNDEDMETYDK	SHUFF_YLR106C	MDN1 SGDID:S000004096,'Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP-dependent remodeling of 60S subunits and subsequent export from nucleoplasm to cytoplasm', Chr XII from 363739-349007, reverse complement, Verified ORF
PROTEIN	1080	YGL019W	0.9998	6	4	1	FILTKPGLQAMAEK FLCLEGAFWGTSFPGVFLKHFK SIIEHAAEQLYGLIHAR SPVVNKSIIEHAAEQLYGLIHARFILTK	YGL019W	CKB1 SGDID:S000002987,'Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase with roles in cell growth and proliferation; the holoenzyme also contains CKA1, CKA2 and CKB2, the many substrates include transcription factors and all RNA polymerases', Chr VII from 458161-458997, Verified ORF
PROTEIN	1081	YHR183W	1.0000	243	15	1	AGAPVDALINQIVPLLEK AYREEPDLENLLFNK DILKFDDVDGKPLVEK DREQFVDDLEQALYASK EQFVDDLEQALYASK GDIIIDGGNSHFPDSNR GDIIIDGGNSHFPDSNRR GILFVGSGVSGGEEGAR IISYAQGFMLIR KGILFVGSGVSGGEEGAR LGGFTDKEISDVFAK LPANLLQAQR RLGGFTDKEISDVFAK SIIGATSIEDFISK YGPSLMPGGSEEAWPHIK	YHR183W	GND1 SGDID:S000001226,'6-phosphogluconate dehydrogenase (decarboxylating), catalyzes an NADPH regenerating reaction in the pentose phosphate pathway; required for growth on D-glucono-delta-lactone and adaptation to oxidative stress', Chr VIII from 470960-472429, Verified ORF
PROTEIN	1082	YLR100W	1.0000	11	5	1	DGMPYIKTQEIDPTGMSDVFAYIQK LVDLLHLATYK TQEIDPTGMSDVFAYIQK VQEVINQIKDFYNK YLSLNDIELLK	YLR100W	ERG27 SGDID:S000004090,'3-keto sterol reductase, catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants are sterol auxotrophs', Chr XII from 341811-342854, Verified ORF
PROTEIN	1083	YGL106W	1.0000	57	6	1	AIGYNPTNQLVQDIINADSSLR DASSLTLDQITGLIEVNEK DIFTLFDK DIFTLFDKK FIEDVLRQ LTDAEVDELLK	YGL106W	MLC1 SGDID:S000003074,'Essential light chain for myosin Myo2p; may stabilize Myo2p by binding to the neck region; may interact with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition', Chr VII from 306563-307012, Verified ORF
PROTEIN	1084	YIR006C	1.0000	10	4	1	EQPQQIAGSSNLVEPR GLDEDEDDGWSDEDESNNR LPNLFNEISTIDNEITNAK STMTGSNMISNQEFER	YIR006C	PAN1 SGDID:S000001445,'Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on the cell cortex; promotes protein-protein interactions essential for endocytosis; previously thought to be a subunit of poly(A) ribonuclease', Chr IX from 369905-365463, reverse complement, Verified ORF
PROTEIN	1085	YDR292C	0.9655	3	2	1	EIDDLLSSHKDEITSGNEAK IKYEESIKQDHINPDNFTK	YDR292C	SRP101 SGDID:S000002700,'Signal recognition particle (SRP) receptor - alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with SRP102p', Chr IV from 1045007-1043142, reverse complement, Verified ORF
PROTEIN	1086	YOL127W	1.0000	139	3	1	ELYEVDVLK LTADYDALDIANR VIEQPITSETAMK	YOL127W	RPL25 SGDID:S000005487,'Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarity to E. coli L23 and rat L23a ribosomal proteins; binds to 26S rRNA via a conserved C-terminal motif', Chr XV from 80348-80360,80775-81190, Verified ORF
PROTEIN	1087	YOR257W	0.9992	2	2	1	EILDLIDEYDSEGR ELGETLTDEELR	YOR257W	CDC31 SGDID:S000005783,'Component of the spindle pole body (SPB) half-bridge, required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; interacts with Kar1p', Chr XV from 811008-811493, Verified ORF
PROTEIN	1088	YJR045C	1.0000	253	18	1	ADQLANDTENSLKEFEGK ADQLANDTENSLKEFEGKVDK AQFETLTAPLVK DAGLSTSDISEVLLVGGMSR DAGQIVGLNVLR DSSITVAGSSGLSENEIEQMVNDAEK DSSITVAGSSGLSENEIEQMVNDAEKFK GQTYSPAQIGGFVLNK KSQIFSTAAAGQTSVEIR LFEQLYK LIGNFTLAGIPPAPK NAVVTVPAYFNDSQR NDSNNNNNNNGNNAESGETKQ QAVVNPENTLFATK SQIFSTAAAGQTSVEIR VQGGEEVNAEELK VQGSVIGIDLGTTNSAVAIMEGK VVNEPTAAALAYGLEK	YJR045C	SSC1 SGDID:S000003806,'Mitochondrial matrix ATPase that is a subunit of the presequence translocase-associated protein import motor (PAM); involved in protein translocation into the matrix and protein folding; member of the heat shock protein 70 (HSP70) family', Chr X from 521517-519553, reverse complement, Verified ORF
PROTEIN	1089	YDL236W	1.0000	18	3	1	GYTFPGAGSMIESLAFSSNR LMGYESLGGADSR VWVFGESGIGEELK	YDL236W	PHO13 SGDID:S000002395,'Alkaline phosphatase specific for p-nitrophenyl phosphate, involved in dephosphorylation of histone II-A and casein', Chr IV from 32296-33234, Verified ORF
PROTEIN	1090	YNL175C	1.0000	4	3	1	DAQGEESTINTPTGDESGEVVK DSENYSGRPDKDDLVAMSK SGASEKDAQGEESTINTPTGDESGEVVK	YNL175C	NOP13 SGDID:S000005119,'Protein of unknown function, localizes to the nucleolus and nucleoplasm; contains an RNA recognition motif (RRM) and has similarity to Nop12p, which is required for processing of pre-18S rRNA', Chr XIV from 308614-307403, reverse complement, Verified ORF
PROTEIN	1091	YIL041W	1.0000	80	5	1	AQAEYFETSAGLMK EFLSNSFAEEPEAKPEVAEEEKPQTAISMNDEDDA LGQVTDISQLPR LTELTHATSASEAQNILVAPGPIKEPK MFPTEEQPLASALLQFSDVQAK	YIL041W	GVP36 SGDID:S000001303,'Golgi vesicle protein of unknown function; localizes to both early and late Golgi vesicles', Chr IX from 276524-277504, Uncharacterized ORF
PROTEIN	1092	YGL041W-A	0.9845	2	1	1	SGIQLGPEQLAPLMTVLGLEK	YGL041W-A	YGL041W-A SGDID:S000028826,'Identified by expression profiling and mass spectrometry', Chr VII from 419047-419295, Dubious ORF
PROTEIN	1093	YOR310C	1.0000	155	7	1	AIAPNLTQLVGELVGAR ASETDLSEILPEEIEER EYLPELLPGMSDNDLSK FNSAANALEEANSIIEGK SPASTIQILGAEK YDALAEDRDDSGDIGLESR YGLLYHASLVGQATGK	YOR310C	NOP58 SGDID:S000005837,'Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA', Chr XV from 898357-896822, reverse complement, Verified ORF
PROTEIN	1094	YOR294W	1.0000	23	4	1	DNVQLLINQLLSLPMK KLDDQWLVEVDDKVK MIYDEASGEWVPK NLPVTVEKPIPVVYDLGNLAAFDSNVLDKNDLDSSNAR	YOR294W	RRS1 SGDID:S000005820,'Essential protein that binds ribosomal protein L11 and is required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; mouse homolog shows altered expression in Huntington's disease model mice', Chr XV from 868339-868950, Verified ORF
PROTEIN	1095	YMR038C	0.9999	31	2	1	GAGKPNSSAVAILETFQK TFLSAPLPTWQLIGR	YMR038C	CCS1 SGDID:S000004641,'Copper chaperone for superoxide dismutase Sod1p, involved in oxidative stress protection; Met-X-Cys-X2-Cys motif within the N-terminal portion is involved in insertion of copper into Sod1p under conditions of copper deprivation', Chr XIII from 348259-347510, reverse complement, Verified ORF
PROTEIN	1096	YGL012W	0.9633	6	3	1	DWDEYCK HLYQLVLENGIPEK TFPFLPYQILK	YGL012W	ERG4 SGDID:S000002980,'C-24(28) sterol reductase, catalyzes the final step in ergosterol biosynthesis; mutants are viable, but lack ergosterol', Chr VII from 472860-474281, Verified ORF
PROTEIN	1097	YML028W	1.0000	265	11	1	DYGVLIEEEGVALR EGGLGPINIPLLADTNHSLSR GKYVVLAFIPLAFTFVCPTEIIAFSEAAKK GLFIIDPK HITINDLPVGR KEGGLGPINIPLLADTNHSLSR KTAVVDGVFDEVSLDK KTAVVDGVFDEVSLDKYK LVEAFQWTDK TAVVDGVFDEVSLDK TAVVDGVFDEVSLDKYK	YML028W	TSA1 SGDID:S000004490,'Ubiquitous housekeeping thioredoxin peroxidase, reduces reactive oxygen, nitrogen and sulfur species using thioredoxin as hydrogen donor; mediates redox regulation of the nuclear localization of Yap1p; deletion results in mutator phenotype', Chr XIII from 220138-220728, Verified ORF
PROTEIN	1098	YBL076C	1.0000	238	30	1	AMAPFTPFLSESIYLR AVADWPVLGK DKPEFSFFDGPPFATGTPHYGHILASTIK DVNDPAVTIGFNVIGQEK EYFDEAIETAVSR FANWIANAR FGWDTHGVPIEHIIDKK FLDGQIALLK IEEVFDCWFESGSMPYASQHYPFENTEKFDER KEYFDEAIETAVSR LKEYIPEAVLAK LYLINSPVLK MSNIDFQYDDSVK NGVISEDSVLPNAIDDLGR NITDLHRDVIDKLTIPSK NIVPQMLDSVMK NYIIEELNVR RFANWIANAR SIVMTYASDWR SVHFLSYPVVK SVPAWFVR TDPIGDEEQSINDTIFK TLVILHSDESYLKDVEALK VLLPWWNSFK VLSLWDEIDAFHTSLELTK VMPYSTGLTTPLSNFEAQQNYK VPANFISEGLDQTR WIDFDNDYK WIDFDNDYKTMYPSFMESTWWAFK YLTNTGNLLLASQIR	YBL076C	ILS1 SGDID:S000000172,'Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A', Chr II from 84259-81041, reverse complement, Verified ORF
PROTEIN	1099	YMR093W	1.0000	6	3	1	IITSKAPLLPQQTTPEQR TLSFIPAAPHLVATGSYDGLIR VFDPLDNFQVK	YMR093W	UTP15 SGDID:S000004699,'Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA', Chr XIII from 454014-455555, Verified ORF
PROTEIN	1100	YER177W	1.0000	170	9	1	DNLTLWTSDMSESGQAEDQQQQQQHQQQQPPAAAEGEAPK DSTLIMQLLR ISDDILSVLDSHLIPSATTGESK LAEQAERYEEMVENMK QAFDDAIAELDTLSEESYK TASEIATTELPPTHPIR TVASSGQELSVEER YEEMVENMK YLAEFSSGDAR	YER177W	BMH1 SGDID:S000000979,'14-3-3 protein, major isoform; binds proteins and DNA, involved in regulation of many processes including exocytosis and vesicle transport, Ras/MAPK signaling during pseudohyphal development, rapamycin-sensitive signaling, and others', Chr V from 545606-546409, Verified ORF
PROTEIN	1101	YHL011C	0.9994	6	3	1	LAVIDISSVLAESIR LDRVVCTNTVPFEEKIK SVIAIVTHGVLSGR	YHL011C	PRS3 SGDID:S000001003,'5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, involved in nucleotide, histidine, and tryptophan biosynthesis; one of a five related enzymes, which are active as heteromultimeric complexes', Chr VIII from 81612-80650, reverse complement, Verified ORF
PROTEIN	1102	YDR397C	0.9650	2	1	1	MISEILDQDLMFTK	YDR397C	NCB2 SGDID:S000002805,'Beta subunit of the NC2 dimeric histone-fold complex; represses RNA polymerase II transcription through binding to TBP and inhibition of TFIIA and TFIIB; homologous to the Dr1 subunit of the mammalian NC2 (negative cofactor2)', Chr IV from 1266890-1266854,1266761-1266358, reverse complement, Verified ORF
PROTEIN	1103	YFL007W	0.9754	3	4	1	IQVILNVLLIKK LENLLLVDIIQLATSLYPDIYK QLVGSYGVVINKIIPSLEKAIK VLLVPYLVDYVLPFLIGLVKHK	YFL007W	BLM10 SGDID:S000001887,'Proteosome activator subunit; found in association with core particles, with and without the 19S regulatory particle; required for resistance to bleomycin, may be involved in protecting against oxidative damage; similar to mammalian PA200', Chr VI from 123474-129905, Verified ORF
PROTEIN	1104	YLR244C	1.0000	20	5	1	DGLEGAYDPFPK DMTWPDDWTSTTQDGK EVLDIAAAHVRPGITTDELDEIVHNETIK GAYPSPLNYYNFPK TPGVMKPGMVFTIEPMINEGTWK	YLR244C	MAP1 SGDID:S000004234,'Methionine aminopeptidase, catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p', Chr XII from 626333-625170, reverse complement, Verified ORF
PROTEIN	1105	YDR321W	1.0000	15	3	1	GVLVSLNDQISSGYYITK LSLPIVYSK SMDGMVPIANVPK	YDR321W	ASP1 SGDID:S000002729,'Cytosolic L-asparaginase, involved in asparagine catabolism', Chr IV from 1108699-1109844, Verified ORF
PROTEIN	1106	YFL037W	1.0000	112	7	1	LAVNLVPFPR LNQPSYGDLNNLVSSVMSGVTTSLR MMATFSVLPSPK NSAIGNLFRPDNYIFGQSSAGNVWAK SINVDLEPGTIDAVR SLTVPELTQQMFDAK VGDQFSAMFK	YFL037W	TUB2 SGDID:S000001857,'Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules', Chr VI from 56335-57708, Verified ORF
PROTEIN	1107	YDL031W	0.9997	2	2	1	ILLTPMYDSLVDVMK SFKDPTFFLSHYAPAGDIQDK	YDL031W	DBP10 SGDID:S000002189,'Putative ATP-dependent RNA helicase of the DEAD-box protein family, constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis', Chr IV from 394214-397201, Verified ORF
PROTEIN	1108	YER030W	0.9967	3	3	1	DDVGYGEKEEDDEDEEDDDFKE EPSTGSKDDVGYGEK SENNGTVEDSESDMDDAK	YER030W	YER030W SGDID:S000000832,'Hypothetical protein', Chr V from 213436-213897, Uncharacterized ORF
PROTEIN	1109	YFR001W	0.9949	4	3	1	DLNIPTLNRAIVPGVK EVAPEVFQDSQAR FIADNDTLTLNR	YFR001W	LOC1 SGDID:S000001897,'Nuclear protein involved in asymmetric localization of ASH1 mRNA; binds double-stranded RNA in vitro; constituent of 66S pre-ribosomal particles', Chr VI from 149105-149719, Verified ORF
PROTEIN	1110	YIL075C	1.0000	7	4	1	EPVALIETVR GLQSAIDVLDPLTKDPVDFVR MYEEASGKEVEK VYYNLGEYESAVK	YIL075C	RPN2 SGDID:S000001337,'Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p', Chr IX from 220697-217860, reverse complement, Verified ORF
PROTEIN	1111	YDL075W	1.0000	106	5	2	GLQTVVVEEDA LAPELNQAIWK NEEEDAKNPLFSYVEPVLVASAK NPLFSYVEPVLVASAK RNEEEDAKNPLFSYVEPVLVASAK	YLR406C,YDL075W	RPL31A SGDID:S000002233,'Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Bp and has similarity to rat L31 ribosomal protein; associates with the karyopherin Sxm1p', Chr IV from 322226-322282,322704-322988, Verified ORF
PROTEIN	1112	YEL039C	0.9912	3	1	2	VGPNLHGIFGR	YJR048W,YEL039C	CYC7 SGDID:S000000765,'Cytochrome c isoform 2, expressed under hypoxic conditions; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration', Chr V from 79977-79636, reverse complement, Verified ORF
PROTEIN	1113	YLR200W	1.0000	17	3	1	IVNEEFDQLEEDTPVYK LEFIETEITR YQQLQNELEEFIVAR	YLR200W	YKE2 SGDID:S000004190,'Subunit of the heterohexameric Gim/prefoldin protein complex involved in the folding of alpha-tubulin, beta-tubulin, and actin', Chr XII from 549014-549358, Verified ORF
PROTEIN	1114	YIL133C	1.0000	30	7	1	AEELNISGEFFR LKVFEGIPPPYDKK LSTSVGWK QLAALGY VASANATAAESDVAK VFEGIPPPYDKK VVVPQALR	YIL133C	RPL16A SGDID:S000001395,'N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA; has similarity to Rpl16Bp, E. coli L13 and rat L13a ribosomal proteins; transcriptionally regulated by Rap1p', Chr IX from 99416-99386,99095-98527, reverse complement, Verified ORF
PROTEIN	1115	YAL005C	1.0000	804	33	1	AEETISWLDSNTTASKEEFDDKLK ARFEELCADLFR ATAGDTHLGGEDFDNR DAGTIAGLNVLR DNNLLGKFELSGIPPAPR ELQDIANPIMSK FELSGIPPAPR GETKNFTPEQISSMVLGK IASKNQLESIAYSLK IINEPTAAAIAYGLDK IINEPTAAAIAYGLDKK KAEETISWLDSNTTASKEEFDDK LDKSQVDEIVLVGGSTR LIDVDGKPQIQVEFK LIDVDGKPQIQVEFKGETK LKELQDIANPIMSK LVNHFIQEFK LVNHFIQEFKR LVTDYFNGKEPNR MKETAESYLGAK NFNDPEVQADMK NFTPEQISSMVLGK NQAAMNPSNTVFDAK NQLESIAYSLK NTISEAGDKLEQADKDTVTK PQIQVEFK PQIQVEFKGETK SINPDEAVAYGAAVQAAILTGDESSK SQVDEIVLVGGSTR TKDNNLLGKFELSGIPPAPR TQDLLLLDVAPLSLGIETAGGVMTK TTPSFVAFTDTER VNDAVVTVPAYFNDSQR	YAL005C	SSA1 SGDID:S000000004,'ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall', Chr I from 141433-139505, reverse complement, Verified ORF
PROTEIN	1116	YPL131W	1.0000	306	10	1	FPGWDFETEEIDPELLR GASDGGLYVPHSENR GVEEVEGEYELTEAVEDGPRPFK GYLADDIDADSLEDIYTSAHEAIR IAALAGQQ LGLDETYK LGLDETYKGVEEVEGEYELTEAVEDGPRPFK SYIFGGHVSQYMEELADDDEER VFGALK VFLDIGLQR	YPL131W	RPL5 SGDID:S000006052,'Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly', Chr XVI from 303120-304013, Verified ORF
PROTEIN	1117	YBL002W	0.9967	58	3	2	ETYSSYIYK LILPGELAK SMSILNSFVNDIFER	YDR224C,YBL002W	HTB2 SGDID:S000000098,'One of two nearly identical (see HTB1) histone H2B subtypes required for chromatin assembly and chromosome function; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation', Chr II from 236495-236890, Verified ORF
PROTEIN	1118	YER122C	0.9958	2	5	1	KEAQQEKEDEFTNSSSSTK LNVNTGSLAPKNNTTGSTPK SQAEDLFDQFKK TFDNATSISSSSYFGEDKEVDEFGNPINSSGSGAGNFDGR YGTQKAISSDQLFGRGSFDEAANR	YER122C	GLO3 SGDID:S000000924,'ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport; shares functional similarity with Gcs1p', Chr V from 404348-402867, reverse complement, Verified ORF
PROTEIN	1119	YHR025W	1.0000	49	3	1	AYPTQDLVFNLQR GLGSSGAAVVAGVILGNEVAQLGFSK LLEPAYDGASVEQQ	YHR025W	THR1 SGDID:S000001067,'Homoserine kinase, conserved protein required for threonine biosynthesis; expression is regulated by the GCN4-mediated general amino acid control pathway', Chr VIII from 159431-160504, Verified ORF
PROTEIN	1120	YOL038W	1.0000	15	3	1	LTLEDPVTVEYLTR LYQTEPSGIYSSWSAQTIGR YTQSGGVRPFGVSTLIAGFDPR	YOL038W	PRE6 SGDID:S000005398,'20S proteasome alpha-type subunit', Chr XV from 255336-256100, Verified ORF
PROTEIN	1121	YDL237W	1.0000	4	2	1	FAFLDAPLLSLEPK IWGAPTWPANLVETISR	YDL237W	YDL237W SGDID:S000002396,'Hypothetical protein', Chr IV from 30657-31829, Uncharacterized ORF
PROTEIN	1122	YLL029W	0.9998	4	3	1	GAGGGSSAGNGSVYSCDSLCAVNR LIFPENTPGFNIDAIAR MTAQNFAIIHSPIDVLK	YLL029W	YLL029W SGDID:S000003952,'Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL029W is not an essential gene but mutant is defective in spore formation', Chr XII from 81460-83709, Uncharacterized ORF
PROTEIN	1123	YNL055C	1.0000	179	11	1	LEFANLTPGLK LEFANLTPGLKNELITSLTPGVAK LGWSLSFDA LNDKQTGLGLTQGWSNTNNLQTK LPNSNVNIEFATR NELITSLTPGVAK QLLRPGVTLGVGSSFDALK QTGLGLTQGWSNTNNLQTK SAVLNTTFTQPFFTAR VSDSGIVTLAYK YAMALSYFAK	YNL055C	POR1 SGDID:S000005000,'Mitochondrial porin (voltage-dependent anion channel), outer membrane protein required for the maintenance of mitochondrial osmotic stability and mitochondrial membrane permeability', Chr XIV from 518846-517995, reverse complement, Verified ORF
PROTEIN	1124	YDR238C	1.0000	20	9	1	ALDISMDLATSR IQDINANNVGALEELTLDILR NAEDVVQLLK NIEPIDTPISFR NLHVQFATLGDLK NSVGEVPILQSEIK SQLPTLHAYLR TVINALKAEALLILVSIVR VSSADTGVIFGNIIYDGAHGEDAR	YDR238C	SEC26 SGDID:S000002646,'Essential beta-coat protein of the COPI coatomer, involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP)', Chr IV from 940812-937891, reverse complement, Verified ORF
PROTEIN	1125	YBR286W	1.0000	58	7	1	FGFTAVVIYDNEPK HGDPDNIVALGAHSDSVEEGPGINDDGSGTISLLNVAK LIAHSVATYADSFEGFPK LIAHSVATYADSFEGFPKR NLYVDYYK SDYVGFINNGIPAGGIATGAEK VFMDYDMMASPNYEYEIYDANNKENPK	YBR286W	APE3 SGDID:S000000490,'Vacuolar aminopeptidase Y, processed to mature form by Prb1p', Chr II from 774696-776309, Verified ORF
PROTEIN	1126	YKL196C	0.9935	4	3	1	EEWADVTETNDALK QSIEEGNYIGHVYAR YQDPSQADAIMK	YKL196C	YKT6 SGDID:S000001679,'Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus', Chr XI from 75539-74937, reverse complement, Verified ORF
PROTEIN	1127	SHUFF_YPL242C	0.9941	7	4	1	EILKLIIYLGIK IILVHK LIIYLGIKWNLVVVK TNSGDPCDER	SHUFF_YPL242C	IQG1 SGDID:S000006163,'Essential protein required for determination of budding pattern, promotes localization of axial markers Bud4p and Cdc12p and functionally interacts with Sec3p, localizes to the contractile ring during anaphase, member of the IQGAP family', Chr XVI from 95109-90622, reverse complement, Verified ORF
PROTEIN	1128	YDR150W	1.0000	38	10	1	ATDHHLLSDSAYEDLVK ATDHHLLSDSAYEELVK ATNHHLLSDSAYEDLVK KGLAEAAATTAYEDSESHPQIEEQSHR KLEQPSLAYLVEHAK KLEQPSLEYLVEHAK LGHTVVSNEAYSELEK MANLKADECGSGDEGDK NDVDIIKTQAMK PKDDELMTKEVAENLNMIALPNDDNYSK	YDR150W	NUM1 SGDID:S000002557,'Protein required for nuclear migration, localizes to the mother cell cortex and the bud tip; may mediate interactions of dynein and cytoplasmic microtubules with the cell cortex', Chr IV from 755625-763871, Verified ORF
PROTEIN	1129	YKL081W	1.0000	258	12	1	GQDFAPAFDVAPDWESYEYTK IDNLAAVFDAR IVDLEQSSEFASLFPLK LLGSDVIEK NYASEALISYFK PFLSFK STFVLDDWK STFVLDDWKR TPFAEVK WASLANSDVMSNIAR WASLANSDVMSNIARPFLSFK WFNTVAASPIVK	YKL081W	TEF4 SGDID:S000001564,'Translation elongation factor EF-1 gamma', Chr XI from 282535-282739,283066-284099, Verified ORF
PROTEIN	1130	YPR118W	0.9505	5	1	1	VLDQLLLPYTTK	YPR118W	YPR118W SGDID:S000006322,'Methylthioribose-1-phosphate isomerase, catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway', Chr XVI from 767750-768985, Verified ORF
PROTEIN	1131	YOR341W	1.0000	65	18	1	AEALNLANTDSQYLTPTSGSPVR ALANQLLTPSSNVSTHTLNKKVYR DISSTLLNELK EAAAEVTNLDKDTPADDPELLKR GSNVNVSQIMCLLGQQALEGR HLDLIADMMTR IVTLPPTIFKPYPLWTGK KALANQLLTPSSNVSTHTLNKK LMNAFVTIQNDVNAFIDSTK LNNVGTGSFDVLAK LTYPEPVTAYNIAELR NTIVNEINNVFSR QAVSYDEPDEDEIETMR SVISPDPNIETNEIGVPPVFAVK TLPSFKPYETDAMAGGYVK VLTTSLLIR YGIVHSLHEVYGPEVAAK YNPSALIEHLDVESALKYSKK	YOR341W	RPA190 SGDID:S000005868,'RNA polymerase I subunit; largest subunit of RNA polymerase I', Chr XV from 960984-965978, Verified ORF
PROTEIN	1132	YDL097C	0.9999	11	2	1	DSLALINDLLR KLDDKPSLVDVHLLESK	YDL097C	RPN6 SGDID:S000002255,'Essential, non-ATPase regulatory subunit of the 26S proteasome lid required for the assembly and activity of the 26S proteasome; the human homolog (S9 protein) partially rescues Rpn6p depletion', Chr IV from 286695-285391, reverse complement, Verified ORF
PROTEIN	1133	YML056C	1.0000	24	10	1	DGLSVQELMDSTTR DIQFLEDDSLVVSEVMTK EQAANLIAAGADGLR ETFPDLEIIAGNVATR FGFSGFPVTEDGK LLIVDDNGNLVSMLSR TASAQLEGGVHNLHSYEK YFSESDSVLVAQGVSGAVVDK YFSESDSVLVAQGVSGAVVDKGSIK YFSESDSVLVAQGVSGAVVDKGSIKK	YML056C	IMD4 SGDID:S000004520,'Inosine monophosphate dehydrogenase, catalyzes the first step of GMP biosynthesis, member of a four-gene family in S. cerevisiae, constitutively expressed', Chr XIII from 164176-163717,163308-162194, reverse complement, Verified ORF
PROTEIN	1134	YLR180W	1.0000	232	10	1	DGSLAWLRPDTK ELDLARPIYLPTASYGHFTNQEYPWEKPK FVIGGPQGDAGLTGR IDTVVVSAQHADEITTEDLR IIVDAYGGASSVGGGAFSGK KIIVDAYGGASSVGGGAFSGK NFDLRPGVLVK PIYLPTASYGHFTNQEYPWEKPK SDEEIIDIISK YFIQPSGR	YLR180W	SAM1 SGDID:S000004170,'S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)', Chr XII from 515264-516412, Verified ORF
PROTEIN	1135	YJR104C	1.0000	71	4	1	FEQASESEPTTVSYEIAGNSPNAER GFHIHEFGDATNGCVSAGPHFNPFK LIGPTSVVGR SVVIHAGQDDLGKGDTEESLK	YJR104C	SOD1 SGDID:S000003865,'Cu, Zn superoxide dismutase; some mutations are analogous to those that cause ALS (amyotrophic lateral sclerosis) in humans', Chr X from 622928-622464, reverse complement, Verified ORF
PROTEIN	1136	YHR113W	0.9994	9	3	1	IPTLAIHLDRDVNQK WEPGNPIAITGAHTDSPALR YESQHKPLLGGGPVIK	YHR113W	YHR113W SGDID:S000001155,'Cytoplasmic aspartyl aminopeptidase; cleaves unblocked N-terminal acidic amino acid residues from peptide substrates; forms a 12 subunit homo-oligomeric complex; inhibited by EDTA and 1,10-phenanthroline; M18 metalloprotease family member', Chr VIII from 336340-337812, Verified ORF
PROTEIN	1137	YGL031C	1.0000	134	4	1	AQRPITGASLDLIK IAWTVLFR MKVEIDSFSGAK PITGASLDLIK	YGL031C	RPL24A SGDID:S000002999,'Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Bp and has similarity to rat L24 ribosomal protein; not essential for translation but may be required for normal translation rate', Chr VII from 437939-437472, reverse complement, Verified ORF
PROTEIN	1138	YOL139C	1.0000	23	7	1	FALWTK FEENVSVDDTTATPK GADIDELWLR GKGADIDELWLR KFEENVSVDDTTATPK LTDDGHLEFFPHSSANGR WTLWYTKPAVDK	YOL139C	CDC33 SGDID:S000005499,'Cytoplasmic mRNA cap binding protein; the eIF4E-cap complex is responsible for mediating cap-dependent mRNA translation via interactions with the translation initiation factor eIF4G (Tif4631p or Tif4632p)', Chr XV from 61024-60383, reverse complement, Verified ORF
PROTEIN	1139	YFR050C	0.9159	3	1	1	TTVQVAEEAIVNAMR	YFR050C	PRE4 SGDID:S000001946,'20S proteasome beta-type subunit', Chr VI from 249853-249053, reverse complement, Verified ORF
PROTEIN	1140	YNL302C	1.0000	314	7	2	DVAAQDFINAYASFLQR IAAQTLEEDE IGIVEISPK LEVPGYVDIVK QGKLEVPGYVDIVK TSSGNEMPPQDAEGWFYK TSSGNEMPPQDAEGWFYKR	YOL121C,YNL302C	RPS19B SGDID:S000005246,'Protein component of the small (40S) ribosomal subunit; nearly identical to Rps19Ap and has similarity to rat S19 ribosomal protein', Chr XIV from 62943-62924,62372-61958, reverse complement, Verified ORF
PROTEIN	1141	YPL004C	1.0000	51	8	1	AAYSYMFDSLR AEAESLVAEAQLSNITR ALLELLDDSPVTPGEAR ALLELLDDSPVTPGEARPAYDGYEASR APTAAELQAPPPPPSSTK FALIAGYGK IPVLEQELVR NAAGNFGPELAR	YPL004C	LSP1 SGDID:S000005925,'Integral membrane protein that along with Pil1p is a primary component of eisosomes, large immobile patch structures at the cell cortex associated with endocytosis; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways', Chr XVI from 551654-550629, reverse complement, Verified ORF
PROTEIN	1142	YOL097C	1.0000	28	8	1	AQVDEETLDKFMVPHK EQVVTPWDVEGGVDEQGR FFPALQGSTTK GPSSDSMHLGHMIPFVFTK ILDLYEQGKPFFLYTGR INKYAFSGGQVSADLHR MSASDDTTAIFMTDTPK YAFSGGQVSADLHR	YOL097C	WRS1 SGDID:S000005457,'Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA', Chr XV from 137825-136527, reverse complement, Verified ORF
PROTEIN	1143	YDL229W	1.0000	62	29	1	ARFEDLNAALFK AVITVPAYFNDAQR DAGAISGLNVLR ENTLLGEFDLK FEDLNAALFK IEAALSDALAALQIEDPSADELR IEAALSDALAALQIEDPSADELRK IINEPTAAAIAYGLGAGK IINEPTAAAIAYGLGAGKSEKER LESYVASIEQTVTDPVLSSK LLSDFFDGK LLSDFFDGKQLEK MVNQAEEFK MVNQAEEFKAADEAFAK QRLESYVASIEQTVTDPVLSSK RTLSSVTQTTVEVDSLFDGEDFESSLTR SINPDEAVAYGAAVQGAILTGQSTSDETK SKIEAALSDALAALQIEDPSADELR SKIEAALSDALAALQIEDPSADELRK SQIDEVVLVGGSTR SSNITISNAVGR STLEPVEQVLK STLEPVEQVLKDAK STSGNTHLGGQDFDTNLLEHFK TFSPQEISAMVLTK TGLDISDDAR TLSSVTQTTVEVDSLFDGEDFESSLTR VIDVDGNPVIEVQYLEETK VTPSFVAFTPEER	YDL229W	SSB1 SGDID:S000002388,'Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, functions with J-protein partner Zuo1p; may be involved in folding of newly-made polypeptide chains; member of the HSP70 family; interacts with phosphatase subunit Reg1p', Chr IV from 44066-45907, Verified ORF
PROTEIN	1144	YKL054C	1.0000	24	4	1	EQQHSYVPQQHLPNPEDDITYK HVPSKPVSNTTSWAAAVSVDTK KEQQHSYVPQQHLPNPEDDITYK KMSWAAIATPKPK	YKL054C	DEF1 SGDID:S000001537,'RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex', Chr XI from 338397-336181, reverse complement, Verified ORF
PROTEIN	1145	YBR196C	1.0000	365	18	1	ANKPMYVDGVNVAPEVDSVLK ELDNSSTISTHDASTNGLINQFK GNVFTDYSTGSILFGEPATNAQHSFFQLVHQGTK GYTGKKITDVVNIGIGGSDLGPVMVTEALK HFAALSTNETEVAK ILFDYSK ITDVVNIGIGGSDLGPVMVTEALK LATELPAWSK LIPSDFILAAQSHNPIENK MLASNFFAQAEALMVGK MLASNFFAQAEALMVGKDEEQVK MLASNFFAQAEALMVGKDEEQVKAEGATGGLVPHK NLVNDEIIAALIELAK NMFGFESWVGGR NWFLSK TFTTAETITNANTAK VFSGNRPTTSILAQK VVDPETTLFLIASK	YBR196C	PGI1 SGDID:S000000400,'Glycolytic enzyme phosphoglucose isomerase, catalyzes the interconversion of glucose-6-phosphate and fructose-6-phosphate; required for cell cycle progression and completion of the gluconeogenic events of sporulation', Chr II from 613895-612231, reverse complement, Verified ORF
PROTEIN	1146	YOR020C	1.0000	30	4	1	LGNDDEVILFR SIVPLMDR VGDQVLIPQFGGSTIK VVPQVKVGDQVLIPQFGGSTIK	YOR020C	HSP10 SGDID:S000005546,'Mitochondrial matrix co-chaperonin that inhibits the ATPase activity of Hsp60p, a mitochondrial chaperonin; involved in protein folding and sorting in the mitochondria; 10 kD heat shock protein with similarity to E. coli groES', Chr XV from 370844-370524, reverse complement, Verified ORF
PROTEIN	1147	SHUFF_YML103C	0.9990	21	4	1	LIVSNILIMISIDYSK LNLYQINLDIESTEQQTYMK TEDEKSVSKISISSK TGVDANKLSLNLILISGSLGLEQLSTKR	SHUFF_YML103C	NUP188 SGDID:S000004571,'Subunit of the nuclear pore complex (NPC), involved in the structural organization of the complex and of the nuclear envelope, also involved in nuclear envelope permeability, interacts with Pom152p and Nic96p', Chr XIII from 67549-62582, reverse complement, Verified ORF