From Marcotte Lab
Revision as of 17:35, 2 March 2012 by Marcotte
This is the homepage for Catapult. Here we provide:
- The predictions for all the OMIM diseases used.
- A query interface, where you can submit your own gene lists and have the results emailed to you.
- The project source code, if you want to test it all yourself.
- All gene-disease predictions in a 300MB tab-delimited text file (or .zipped 120MB version here). Rows represent human genes, indicating gene names in column 1 as NCBI Entrez genome/Locus link ID numbers. Columns represent human diseases or mouse phenotypes. Entries represent computed scores for gene-trait associations, where larger values indicate more likely associations. All values are scaled, such that sorting by values in a given column allows one to find the most likely genes for that disease, and sorting by values in a given row allows one to find the most likely linked traits for a given gene (obvious caveats being that the diseases/genes must be represented in this table, and the associations are subject to the reach and quality of the predictions captured by CATAPULT.)