Brief description of source structure of MSblender. You can download the source code at GitHub repository: https://github.com/marcottelab/MSblender
A directory for pre-processing, before running MSblender.
A directory for running MSblender.
A directory for post-processing, after running MSblender.
A directory for scripts running search engines & defaults parameter files.
A directory for external search engines. Currently MSGFDB, comet and X!tandem are maintained. See 'VERSION' for detailed version info of each search engine.
A directory for 'retired' scripts. We keep them here for tracking purpose only, so don't use them.
A directory for scripts mimicking Scaffold. We used this code for benchmark in original MSblender paper.