Difference between revisions of "PSEAE CF.2010"

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* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.eset_rma.txt.gz RMA pre-processing, ExpressSet]
 
* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.eset_rma.txt.gz RMA pre-processing, ExpressSet]
 
* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.eset_mas5.txt.gz MAS5 pre-processing, ExpressSet]
 
* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.eset_mas5.txt.gz MAS5 pre-processing, ExpressSet]
* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.calls_mas5.txt.gz (MAS5 pre-processing, P/M/A calls]
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* [http://www.marcottelab.org/users/taejoon/PSEAE_CF/microarray/Huse2010_GSE21966.calls_mas5.txt.gz MAS5 pre-processing, P/M/A calls]
  
 
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[[Category:Publication]]
 
[[Category:Publication]]

Revision as of 12:56, 8 September 2010

Web supplement for 'Huse HK, Kwon T, Zlosnik JEA, Speert DP, Marcotte EM, Whiteley M, Parallel evolution in Pseudomonas aeruginosa over 39,000 generations in vivo, mBIO, :in press (2010) PubMed '

Contents

Supplement Tables

  • Table S1. Strains
  • Table S2. P. aeruginosa orthologs
  • Table S3. Affymetrix microarray annotation
  • Table S4. P. aeruginosa annotation
  • Table S5. Differentially expressed genes between progenitors
  • Table S6. Differentially expressed genes within isogenic groups (compared to each progenitor/first strain).
  • Table S7. Differentially expressed genes between isogenic groups.
  • Table S8. Functional enrichment data for Table S7
  • Table S9. Functional enrichment data for Table S6

Microarray Data

CEL files

Gzipped TXT files