Difference between revisions of "XENLA Genome"

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(Genome version)
(Genome version)
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= Genome version =
 
= Genome version =
 
{| class="wikitable" style="text-align: center"
 
{| class="wikitable" style="text-align: center"
 +
!Name
 +
!Release Date
 +
!Concat. Length (bp)
 +
!N50 (bp)
 +
!Scaffolds > 10kbp
 +
|-
 
|JGIv1
 
|JGIv1
 
|2009
 
|2009
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|JGIv6a
 
|JGIv6a
 
|2010 oct
 
|2010 oct
 +
|-
 
|JGIv7a
 
|JGIv7a
 
|2012 Mar.
 
|2012 Mar.

Revision as of 12:38, 8 May 2013

Contents

Genome browser

Genome version

Name Release Date Concat. Length (bp) N50 (bp) Scaffolds > 10kbp
JGIv1 2009
JGIv5 2009 Oct.
JGIv6 2010
JGIv6a 2010 oct
JGIv7a 2012 Mar.
JGIv7b 2012 May
NIGv1 2011 Nov
NIGv1ap 2011 Nov
NIGv1m 2011 Nov.
NIGv2 2012
NIGv2c 2012

Data Summary

Whole genome shotgun sequencing, JGI/UC Berkeley, USA

  • Illumina mate-pair

Whole genome shotgun sequencing, NIG/U Tokyo, Japan

  • Illumina mate-pair

Whole genome shotgun sequencing, UT Austin, USA

  • SOLiD mate-pair

BAC-end sequencing, NIG/U Tokyo, Japan

BAC full sequencing, NIG/U Tokyo, Japan

BAC shotgun sequencing, UT Austin, USA

FISH, NIG/U Tokyo, Japan