XENLA Genome

From Marcotte Lab
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Contents

Genome browser

Genome version

Name Release Date Concat. Length (bp) N50 (bp) Scaffolds > 10kbp Remarks
JGIv1 2009
JGIv5 2009 Oct.
JGIv6 2010
JGIv6a 2010 oct
NIGv1 2012 Nov
NIGv1ap 2012 Nov
NIGv1m 2012 Nov.
NIGv2 2013 Feb.
NIGv2c 2013 Feb.
JGIv7a 2013 Mar. 2.72 Gbp 1.15 Mbp 5,714
JGIv7b 2013 May 2.78 Gbp 3.49 Mbp 2,598

Data Summary

Whole genome shotgun sequencing, JGI/UC Berkeley, USA

  • Illumina mate-pair

Whole genome shotgun sequencing, NIG/U Tokyo, Japan

  • Illumina mate-pair

Whole genome shotgun sequencing, UT Austin, USA

  • SOLiD mate-pair

BAC-end sequencing, NIG/U Tokyo, Japan

BAC full sequencing, NIG/U Tokyo, Japan

BAC shotgun sequencing, UT Austin, USA

FISH, NIG/U Tokyo, Japan