Total	Overlap	F3	F5	Target
17 	1 	1 	16 	Martes_zibellina_mitochondrion,|FJ429093.1
38 	1 	31 	7 	Pinus_contorta_chloroplast,|EU998740.4
37 	1 	30 	7 	Cathaya_argyrophylla_chloroplast|AB547400.1
24 	1 	21 	3 	Pseudendoclonium_akinetum_chloroplast,|AY835431.1
24 	1 	17 	7 	Bryopsis_hypnoides_chloroplast,|GQ892829.1
36 	1 	27 	9 	Tripsacum_dactyloides_cultivar|DQ984517.1
14 	1 	10 	4 	Mus_musculus_musculus|DQ874614.2
14 	1 	10 	4 	Mus_musculus_molossinus|AY675564.1
15 	2 	11 	4 	Mus_musculus_castaneus|EF108342.1
22 	2 	17 	5 	Mus_musculus_domesticus|AB042432.1
22 	2 	17 	5 	Mus_musculus_strain|AY172335.1
3 	1 	2 	1 	Gallid_herpesvirus_2|AY510475.1
9 	1 	5 	4 	Homo_sapiens_mitochondrial|X93334.1
9 	1 	5 	4 	Homo_sp._Altai|FR695060.1
9 	1 	5 	4 	Homo_sp._Altai|FN673705.1
9 	1 	5 	4 	Homo_sapiens_mitochondrion,|J01415.2
9 	1 	5 	4 	Homo_sapiens_neanderthalensis|AM948965.1
16 	2 	8 	8 	Pan_troglodytes_ellioti|HM068585.1
18 	2 	10 	8 	Pan_troglodytes_schweinfurthii|GU112740.1
18 	2 	8 	10 	Pan_troglodytes_vellerosus|GU112742.1
18 	2 	10 	8 	Pan_troglodytes_troglodytes|GU112738.1
18 	3 	10 	8 	Pan_troglodytes_mitochondrial|D38113.1
16 	3 	9 	7 	Pan_troglodytes_verus|GU112739.1
23 	3 	13 	10 	Pan_paniscus_mitochondrial|D38116.1
59 	7 	43 	16 	Zygnema_circumcarinatum_chloroplast,|AY958086.1
55 	9 	39 	16 	Megaceros_aenigmaticus_mitochondrion,|EU660574.1
34 	1 	29 	5 	Pisum_sativum_cultivar|HM029370.1
36 	1 	30 	6 	Heterosigma_akashiwo_strain|EU168190.1
34 	1 	28 	6 	Kryptoperidinium_foliaceum_strain|GU591328.1
34 	1 	28 	6 	Thalassiosira_oceanica_CCMP1005|GU323224.1
36 	1 	29 	7 	Fucus_vesiculosus_complete|FM957154.1
36 	1 	30 	6 	Heterosigma_akashiwo_strain|EU168191.1
37 	1 	30 	7 	Ectocarpus_siliculosus_chloroplast,|FP102296.1
33 	1 	27 	6 	Vaucheria_litorea_chloroplast,|EU912438.1
35 	2 	28 	7 	Phaeodactylum_tricornutum_chloroplast,|EF067920.1
37 	2 	30 	7 	Thalassiosira_pseudonana_chloroplast,|EF067921.1
35 	2 	28 	7 	Odontella_sinensis_complete|Z67753.1
35 	2 	28 	7 	Durinskia_baltica_strain|GU591327.1
15 	1 	5 	10 	Guillardia_theta_nucleomorph|AF165818.4
16 	1 	5 	11 	Guillardia_theta_nucleomorph|AF083031.2
46 	3 	31 	15 	Selaginella_moellendorffii_plastid,|FJ755183.1
49 	4 	12 	37 	Leishmania_braziliensis_MHOM/BR/75/M2904|FR798995.1
33 	1 	26 	7 	Cryptomeria_japonica_chloroplast|AP009377.1
26 	1 	20 	6 	Welwitschia_mirabilis_chloroplast,|EU342371.1
29 	1 	24 	5 	Ephedra_equisetina_chloroplast|AP010819.1
34 	1 	25 	9 	Cycas_taitungensis_chloroplast|AP009339.1
28 	1 	23 	5 	Gnetum_parvifolium_chloroplast|AP009569.1