#AC.SeqVer.	EntryVer.	Ver.Date	Taxid	Description
AP009202.1	1	20090110	392897	Abalistes stellaris mitochondrion
EU302588.1	1	20081105	485912	Abispa ephippium mitochondrion
AB373007.1	1	20080827	129035	Ablennes hians mitochondrion
AP006016.1	2	20081119	192871	Abudefduf vaigiensis mitochondrion
EF672731.2	5	20100806	449243	Acanella eburnea mitochondrion
AP009212.1	1	20090110	392908	Acanthaluteres brownii mitochondrion
U12386.1	18	20061114	5755	Acanthamoeba castellanii mitochondrion
AB231476.1	3	20081118	339859	Acanthaster brevispinus mitochondrion
AB231475.1	4	20081118	133434	Acanthaster planci mitochondrion
DQ632743.1	1	20061004	385555	Acanthocardia tuberculata mitochondrion
AY486321.1	1	20040724	267130	Acanthogobius hasta mitochondrion
EF506764.1	2	20081112	8177	Acanthopagrus latus mitochondrion
AB266452.1	2	20100627	285987	Acanthosaura armata mitochondrion
EU136032.1	1	20070917	459747	Acanthurus leucosternon mitochondrion
EU273284.2	4	20101119	483362	Acanthurus lineatus mitochondrion
AB242161.1	3	20091028	357281	Acantopsis choirorhynchos mitochondrion
AP010797.1	1	20081229	8957	Accipiter gentilis mitochondrion
HQ834450.1	1	20110206	978109	Aceros waldeni mitochondrion
FJ424614.1	1	20081112	572522	Achalinus meiguensis mitochondrion
EF483933.1	2	20100220	430564	Acheilognathus intermedia mitochondrion
EF483932.1	1	20091231	430563	Acheilognathus koreensis mitochondrion
EF483935.1	1	20091231	80791	Acheilognathus macropterus mitochondrion
EF483930.1	2	20100220	80807	Acheilognathus signifer mitochondrion
FJ515921.1	1	20101231	481701	Acheilognathus somjinensis mitochondrion
AB239602.1	2	20090215	80789	Acheilognathus typus mitochondrion
EF483936.1	1	20091231	80790	Acheilognathus yamatsutae mitochondrion
AY457170.1	3	20081118	262805	Achelia bituberculata mitochondrion
AF344830.1	7	20061114	32536	Acinonyx jubatus mitochondrion
AY510085.1	3	20070311	62061	Acipenser dabryanus mitochondrion
FJ392605.1	1	20090401	7902	Acipenser gueldenstaedtii mitochondrion
EU719645.1	1	20090430	61970	Acipenser sinensis mitochondrion
AJ585050.1	4	20071107	7903	Acipenser stellatus mitochondrion
AB042837.1	3	20101229	7904	Acipenser transmontanus mitochondrion
FJ613420.1	2	20091120	590154	Acmaeodera sp. NCS-2009 mitochondrion
EU273602.1	1	20071121	263995	Acorus americanus chloroplast
AJ879453.1	6	20061114	4465	Acorus calamus chloroplast
GQ376195.1	2	20100921	378386	Acraea issoria mitochondrion
AP009213.1	1	20090110	392910	Acreichthys tomentosus mitochondrion
GU344100.1	3	20110126	244713	Acrida cinerea mitochondrion
EU938372.1	1	20080930	227550	Acrida willemsei mitochondrion
AM889139.1	2	20080221	48156	Acrocephalus scirpaceus mitochondrion
AB177879.1	3	20080924	46287	Acrochordus granulatus mitochondrion
AF338425.1	3	20050415	70783	Acropora tenuis mitochondrion
FJ752436.1	2	20100615	8992	Acryllium vulturinum mitochondrion
FJ411411.1	1	20081216	7029	Acyrthosiphon pisum mitochondrion
FJ613422.1	2	20091120	590155	Adelium sp. NCS-2009 mitochondrion
AY178864.1	7	20050416	13818	Adiantum capillus-veneris chloroplast
DQ073916.1	2	20060525	85585	Adoxophyes honmai mitochondrion
EU352212.1	1	20080105	7159	Aedes aegypti mitochondrion
AY072044.1	2	20050416	7160	Aedes albopictus mitochondrion
EU344979.1	2	20090115	48279	Aegotheles cristatus mitochondrion
AP009198.1	2	20080116	270546	Aeoliscus strigatus mitochondrion
EU427333.1	1	20081224	498933	Aeschyntelus notatus mitochondrion
AP009366.1	1	20070414	434059	Aethionema cordifolium chloroplast
AP009367.1	1	20070414	72657	Aethionema grandiflorum chloroplast
DQ665656.1	1	20060703	390897	Agamermis sp. BH-2006 isolate Riverside mitochondrion
EU410486.1	2	20090115	60468	Agapornis roseicollis mitochondrion
DQ643831.1	2	20060616	367765	Agaricia humilis mitochondrion
EU237475.1	2	20090113	333317	Agelas schmidti mitochondrion
DQ523161.1	2	20070818	8715	Agkistrodon piscivorus mitochondrion
EF115543.1	1	20061208	63632	Agrostis stolonifera cultivar Penn A-4 chloroplast
EF212882.1	2	20070630	9646	Ailuropoda melanoleuca mitochondrion
AM711897.1	3	20080403	9649	Ailurus fulgens mitochondrion
AB291074.1	2	20071011	424585	Ailurus fulgens styani mitochondrion
X83390.1	10	20061114	42349	Albinaria caerulea mitochondrion
AP002973.1	4	20101229	121402	Albula glossodonta mitochondrion
AB239593.1	2	20090215	54556	Alburnus alburnus mitochondrion
AP002974.1	4	20101229	143900	Aldrovandia affinis mitochondrion
FJ752426.1	4	20100615	9078	Alectoris chukar mitochondrion
AY346091.1	2	20061121	81907	Alectura lathami mitochondrion
AP009570.1	1	20091130	492023	Alepocephalus agassizii mitochondrion
AP009571.1	1	20091130	492024	Alepocephalus australis mitochondrion
AP009572.1	1	20091130	134618	Alepocephalus bairdii mitochondrion
AP009399.1	1	20080620	443629	Alepocephalus bicolor mitochondrion
AP009574.1	1	20091130	492027	Alepocephalus productus mitochondrion
AP004100.1	4	20061114	170189	Alepocephalus tenebrosus mitochondrion
AP009575.1	1	20091130	492028	Alepocephalus umbriceps mitochondrion
AY572538.1	3	20061114	266942	Aleurochiton aceris mitochondrion
AY521251.1	5	20061114	30099	Aleurodicus dugesii mitochondrion
Y13113.1	10	20061114	8496	Alligator mississippiensis mitochondrion
AF511507.1	2	20050415	38654	Alligator sinensis mitochondrion
AP004435.1	2	20050416	181445	Allocyttus niger mitochondrion
U41288.1	6	20061114	28583	Allomyces macrogynus mitochondrion
AP009131.1	1	20070612	278164	Alosa alosa mitochondrion
AP009132.1	1	20070612	34774	Alosa pseudoharengus mitochondrion
HQ331537.1	1	20101028	34773	Alosa sapidissima mitochondrion
GQ892049.1	1	20101231	674293	Alpheus distinguendus mitochondrion
FJ556581.1	2	20090813	204586	Alsophila spinulosa chloroplast
AP009183.1	1	20081001	303710	Aluterus scriptus mitochondrion
AY585337.1	3	20061114	171366	Alytes obstetricans pertinax mitochondrion
GU196685.1	1	20100715	698013	Amalda northlandica mitochondrion
AP009214.1	1	20090110	245707	Amanses scopas mitochondrion
AP009617.1	1	20100627	501721	Amazonsprattus scintilla mitochondrion
AB113317.1	2	20061114	65637	Amblyomma triguttatum mitochondrion
AF106038.1	3	20050415	386614	Amblyraja radiata mitochondrion
AJ506156.2	6	20061114	13333	Amborella trichopoda chloroplast
GU078472.1	1	20100920	436160	Ambystoma unisexual lineage LJJJ mitochondrion
AY659993.1	2	20050415	282260	Ambystoma andersoni mitochondrion
GU078469.1	1	20100920	238860	Ambystoma barbouri mitochondrion
AY659995.1	2	20050415	43107	Ambystoma californiense mitochondrion
AY659994.1	2	20050415	282261	Ambystoma dumerilii mitochondrion
AY728218.1	2	20040922	8298	Ambystoma laterale mitochondrion
AJ584639.1	4	20061114	8296	Ambystoma mexicanum
GU078471.1	1	20100920	8304	Ambystoma texanum mitochondrion
AY659992.1	2	20050415	43116	Ambystoma tigrinum tigrinum mitochondrion
AB042952.1	4	20101229	7924	Amia calva mitochondrion
GU065293.1	2	20110220	648471	Ammothea carolinensis mitochondrion
EF466060.1	2	20080531	9899	Ammotragus lervia mitochondrion
DQ835616.1	1	20070501	393050	Amolops tormotus mitochondrion
EU237474.1	2	20080221	178514	Amphimedon compressa mitochondrion
DQ915601.1	1	20070202	400682	Amphimedon queenslandica mitochondrion
FN562578.1	2	20100602	48271	Amphipholis squamata mitochondrion
AP006017.1	2	20081119	80972	Amphiprion ocellaris mitochondrion
AY605475.1	2	20061114	273519	Amphisbaena schmidti mitochondrion voucher MVZ 232754
EF373911.1	1	20071108	316456	Anabrus simplex mitochondrion
AY903295.1	3	20050417	310697	Anacropora matthai mitochondrion
AP010843.1	2	20101229	556235	Anarchias sp. Ansp mitochondrion
EF427918.1	2	20070911	425520	Anarhichas denticulatus mitochondrion
EF427916.1	1	20070831	8204	Anarhichas lupus mitochondrion
EF427917.1	2	20070911	65739	Anarhichas minor mitochondrion
EU009397.1	1	20070714	8839	Anas platyrhynchos mitochondrion
AP011557.1	1	20100627	686567	Anchoviella sp. LBP 2297 mitochondrion
FJ483518.1	1	20090323	29170	Ancylostoma caninum mitochondrion
AJ417718.1	2	20050415	51022	Ancylostoma duodenale mitochondrion
AJ492192.1	4	20061114	141262	Andrias davidianus mitochondrion
AB208679.1	2	20061114	166789	Andrias japonicus mitochondrion
AY728214.1	2	20040922	154579	Aneides flavipunctatus mitochondrion
AY728226.1	2	20040922	154580	Aneides hardii mitochondrion
EU043314.1	2	20080223	280810	Aneura mirabilis chloroplast
DQ821119.1	5	20070801	13825	Angiopteris evecta chloroplast
GQ398121.1	2	20090810	6313	Angiostrongylus cantonensis mitochondrion
GQ398122.1	2	20090810	334426	Angiostrongylus costaricensis mitochondrion
AP007233.1	3	20110119	7936	Anguilla anguilla mitochondrion
AP007234.1	3	20110119	86961	Anguilla australis australis mitochondrion
AP007235.1	4	20110119	86962	Anguilla australis schmidtii mitochondrion
AP007245.1	3	20110119	103832	Anguilla bengalensis labiata mitochondrion
AP007236.1	3	20110119	61125	Anguilla bicolor bicolor mitochondrion
AP007237.2	3	20110119	61126	Anguilla bicolor pacifica mitochondrion
AP007239.1	3	20110119	48163	Anguilla celebesensis mitochondrion
AP007240.1	3	20110119	61127	Anguilla dieffenbachii mitochondrion
AP007241.1	3	20110119	86967	Anguilla interioris mitochondrion
AB038556.2	5	20110119	7937	Anguilla japonica mitochondrion
AB469437.1	4	20110119	573744	Anguilla luzonensis mitochondrion
AP007238.1	3	20110119	103812	Anguilla malgumora mitochondrion
AP007242.1	3	20110119	7939	Anguilla marmorata mitochondrion
AP007243.1	3	20110119	86963	Anguilla megastoma mitochondrion
AP007244.1	3	20110119	48164	Anguilla mossambica mitochondrion
AP007246.1	3	20110119	86966	Anguilla nebulosa nebulosa mitochondrion
AP007247.1	3	20110119	86964	Anguilla obscura mitochondrion
AP007248.1	3	20110119	48165	Anguilla reinhardtii mitochondrion
AP007249.2	4	20110121	7938	Anguilla rostrata mitochondrion
EU917054.1	1	20091015	549385	Anguilla sp. HYT-2008 mitochondrion
EU443256.1	1	20081216	102178	Anguis fragilis mitochondrion
FJ755180.1	3	20100721	51844	Anilius scytale mitochondrion
AY994157.1	1	20060329	6269	Anisakis simplex mitochondrion
HQ283344.1	1	20110318	120564	Anodonta woodiana isolate AW19 mitochondrion
HQ283345.1	1	20110318	120564	Anodonta woodiana isolate AW22 mitochondrion
HQ283347.1	1	20110318	120564	Anodonta woodiana isolate AW123 mitochondrion
HQ283346.1	1	20110318	120564	Anodonta woodiana isolate AW124 mitochondrion
HQ283348.1	1	20110318	120564	Anodonta woodiana isolate AW125 mitochondrion
EU747728.2	3	20110131	28377	Anolis carolinensis mitochondrion
AF338714.1	4	20050527	8811	Anomalopteryx didiformis mitochondrion, partial
AM159537.1	2	20070220	359030	Anomalurus sp. GP-2005 mitochondrion
GQ329703.1	1	20100421	38684	Anomochloa marantoidea chloroplast
HQ335344.1	1	20110309	58236	Anopheles albitarsis mitochondrion
HQ335349.1	1	20110309	352057	Anopheles albitarsis F mitochondrion
HQ335346.1	1	20110309	908352	Anopheles albitarsis G mitochondrion
GQ918272.1	1	20100628	43151	Anopheles darlingi mitochondrion
HQ335347.1	1	20110309	58243	Anopheles deaneorum mitochondrion
DQ146364.1	2	20061114	62324	Anopheles funestus mitochondrion
L20934.1	8	20061114	7165	Anopheles gambiae mitochondrion
HQ335348.1	1	20110309	337448	Anopheles janconnae mitochondrion
HQ335345.1	1	20110309	58237	Anopheles oryzalimnetes mitochondrion
L04272.1	11	20061114	42377	Anopheles quadrimaculatus A mitochondrion
AP009186.1	1	20081001	388627	Anoplocapros lenticularis mitochondrion
AP004425.1	2	20050416	88656	Anoplogaster cornuta mitochondrion
DQ768215.1	2	20061114	217634	Anoplophora glabripennis mitochondrion
AF363031.1	2	20050415	50365	Anser albifrons mitochondrion
EU932689.1	1	20080826	8843	Anser anser mitochondrion
AY309455.1	4	20050416	8851	Anseranas semipalmata mitochondrion
AM404181.1	2	20080512	105859	Antedon mediterranea mitochondion
AY242996.2	4	20090428	7119	Antheraea pernyi mitochondrion
EU726630.1	2	20090819	7121	Antheraea yamamai mitochondrion
AB086179.1	14	20061114	48387	Anthoceros formosae chloroplast
GU456628.1	1	20110131	40888	Anthriscus cerefolium chloroplast
AP002943.1	2	20050416	143339	Antigonia capros mitochondrion
AP003422.1	1	20090224	59525	Antilope cervicapra mitochondrion
DQ344025.1	1	20080101	364406	Antrokoreana gracilipes mitochondrion
GQ131336.1	1	20090603	160702	Anyperodon leucogrammicus mitochondrion
FJ785421.1	1	20090422	43147	Aotus lemurinus mitochondrion
FJ890514.1	1	20100407	100213	Apalone ferox mitochondrion
FJ613421.1	2	20091120	590156	Apatides fortis mitochondrion
AB445126.1	2	20090113	240154	Apeltes quadracus mitochondrion
EU523754.1	1	20080401	507507	Aphonopelma sp. 1 SEM-2008 mitochondrion
AP004403.1	2	20050416	94919	Aphredoderus sayanus mitochondrion
EU000309.1	2	20081126	83887	Aphrocallistes vastus mitochondrion
AB218688.1	3	20090215	140595	Aphyocypris chinensis mitochondrion
GQ162109.1	2	20100606	7461	Apis cerana mitochondrion
L06178.1	10	20061114	7469	Apis mellifera ligustica mitochondrion
FN313538.1	1	20091127	286149	Aplidium conicum mitochondrion
AB373005.1	3	20091127	52581	Aplocheilus panchax mitochondrion
AY569552.1	6	20060425	6500	Aplysia californica mitochondrion
DQ991927.1	1	20110119	144766	Aplysia dactylomela mitochondrion
EU237476.1	2	20080221	289401	Aplysina fulva mitochondrion
AP011624.1	1	20110114	417555	Apochrysa matsumurae mitochondrion
FJ906623.1	2	20101119	307972	Apostichopus japonicus mitochondrion
AF338708.2	5	20050527	8823	Apteryx haastii mitochondrion
GU071052.1	1	20100205	8824	Apteryx owenii mitochondrion
AM237310.1	2	20061114	8895	Apus apus mitochondrion
Y08501.2	20	20090630	3702	Arabidopsis thaliana mitochondrion
AP000423.1	11	20090702	3702	Arabidopsis thaliana chloroplast
AP009369.1	1	20070414	78191	Arabis hirsuta chloroplast
EF523611.1	2	20080411	113544	Arapaima gigas mitochondrion
HM640208.1	1	20110302	869457	Aratinga pertinax chrysogenys mitochondrion
X80396.1	16	20061214	7640	Arbacia lixula mitochondrion
FJ752425.1	4	20100615	604435	Arborophila gingica mitochondrion
FJ194942.1	1	20090323	559495	Arborophila rufipectus mitochondrion
FJ752424.1	4	20100615	604433	Arborophila rufogularis mitochondrion
EF532935.1	2	20080326	190676	Archilochus colubris mitochondrion
FJ429092.1	1	20081110	256136	Architeuthis dux mitochondrion
AP004452.1	2	20050416	181474	Arcos sp. KU-149 mitochondrion
AF513820.1	3	20050415	29084	Arctocephalus forsteri mitochondrion
AM181018.1	3	20070821	37191	Arctocephalus pusillus mitochondrion
AM181021.1	3	20070821	161921	Arctocephalus townsendi mitochondrion
FM177762.1	1	20080731	551196	Arctodus simus mitochondrion
AM919429.1	2	20100527	185735	Arctogadus glacialis mitochondrion
AP003090.1	8	20100907	148607	Arctoscopus japonicus mitochondrion
GU324311.1	1	20100128	710733	Arcyptera coreana mitochondrion
DQ780878.1	4	20061220	390973	Ardea novaehollandiae mitochondrion
AY074885.2	4	20050527	54971	Arenaria interpres mitochondrion
EU023915.1	1	20070718	31199	Argopecten irradians mitochondrion
DQ665851.1	2	20100319	158587	Argopecten irradians irradians mitochondrion
AY456187.1	5	20061208	260819	Argulus americanus mitochondrion
AP010861.1	3	20110119	135220	Ariosoma shiroanago mitochondrion
AY456186.1	4	20061114	260804	Armillifer armillatus mitochondrion
AP006742.1	3	20090227	264149	Arothron firmamentum mitochondrion
X69067.1	23	20050418	6661	Artemia franciscana mitochondrion
FJ385029.1	1	20090618	119676	Arthroderma obtusum mitochondrion
FJ385030.1	1	20090618	63405	Arthroderma otae mitochondrion
FJ385028.1	1	20090618	74035	Arthroderma uncinatum mitochondrion
AF061340.1	2	20050415	9417	Artibeus jamaicensis mitochondrion
FJ171324.1	2	20090327	559169	Ascaloptynx appendiculatus mitochondrion
X54253.1	81	20061114	6253	Ascaris suum mitochondrion
AY345022.2	6	20090414	195875	Ascobulla fragilis mitochondrion
AB300501.1	1	20080702	436354	Ascoschoengastia sp. TATW-1 mitochondrion
DQ207726.1	3	20080326	5061	Aspergillus niger strain N909 mitochondrion
AP007176.1	3	20060227	5062	Aspergillus oryzae RIB40 mitochondrion
DQ217399.1	3	20070317	5068	Aspergillus tubingensis strain 0932 mitochondrion
AB183559.1	3	20050819	7602	Asterias amurensis mitochondrion
DQ643832.1	2	20060616	388629	Astrangia sp. JVK-2006 mitochondrion
AP009127.1	3	20081119	50733	Astronotus ocellatus mitochondrion
AB183560.1	3	20050819	60560	Astropecten polyacanthus mitochondrion
FN562580.1	2	20100602	691888	Astrospartus mediterraneus mitochondrion
AP009352.1	3	20081126	426587	Asymmetron inferum mitochondrion
AB110092.1	3	20061114	223987	Asymmetron lucayanum mitochondrion
AP009353.1	3	20081126	426588	Asymmetron sp. A TK-2007 mitochondrion
AP010887.1	1	20090127	565089	Ataxolepis apus mitochondrion
AP002916.1	2	20050416	143306	Ateleopus japonicus mitochondrion
FJ785422.1	1	20090422	9507	Ateles belzebuth mitochondrion
EU084035.1	2	20090515	459531	Atelura formicaria mitochondrion
EU263919.1	1	20090101	244711	Atractomorpha sinensis mitochondrion
AJ316582.1	5	20061114	33113	Atropa belladonna strain Ab5p(kan) chlororplast
AB445127.1	2	20090113	149088	Aulichthys japonicus mitochondrion
AB047821.1	4	20100826	136300	Aulopus japonicus mitochondrion
AP009196.1	2	20080116	240152	Aulorhynchus flavidus mitochondrion
AP009197.1	2	20080116	150448	Aulostomus chinensis mitochondrion
DQ787873.1	2	20061114	6145	Aurelia aurita mitochondrion
GQ231541.1	2	20100629	44056	Aureococcus anophagefferens chloroplast
GQ231542.1	3	20100629	44058	Aureoumbra lagunensis chloroplast
AB103467.1	3	20080620	217026	Auxis rochei mitochondrion
AB105447.1	3	20080620	13353	Auxis thazard mitochondrion
AP010855.1	2	20101229	121280	Avocettina infans mitochondrion
AY791693.1	3	20061114	153946	Axinella corrugata mitochondrion
AF090337.1	5	20050527	30385	Aythya americana mitochondrion
EU075182.1	2	20071214	5865	Babesia bovis mitochondrion
EF014414.1	1	20070910	69614	Bactrocera carambolae mitochondrion
DQ845759.1	1	20061231	27457	Bactrocera dorsalis mitochondrion
HM776033.1	1	20100811	104690	Bactrocera minax mitochondrion
AY210702.1	3	20050420	104688	Bactrocera oleae mitochondrion
DQ917578.1	1	20070910	69547	Bactrocera papayae isolate SH63 mitochondrion
DQ995281.1	1	20070910	86797	Bactrocera philippinensis mitochondrion
HQ130030.1	1	20101018	59916	Bactrocera tryoni mitochondrion
AP009578.1	1	20091130	492034	Bajacalifornia megalops mitochondrion
AJ554051.1	4	20061114	27602	Balaena mysticetus mitochondrion
AJ554054.1	4	20061114	9767	Balaenoptera acutorostrata mitochondrion
AP006466.1	2	20050416	33556	Balaenoptera bonaerensis mitochondrion
AP006470.1	2	20050416	9768	Balaenoptera borealis mitochondrion
AP006469.1	2	20050416	255365	Balaenoptera brydei mitochondrion
AB201259.1	3	20061114	255365	Balaenoptera brydei mitochondrion isolate:NSMT-33072
AB201258.1	4	20080119	9769	Balaenoptera edeni mitochondrion isolate:NSMT-33622
X72204.1	18	20061114	9771	Balaenoptera musculus mitochondrion
AB201256.1	4	20080517	255217	Balaenoptera omurai mitochondrion
X61145.1	58	20061114	9770	Balaenoptera physalus mitochondrion
AF051097.1	4	20050415	35080	Balanoglossus carnosus mitochondrion
FN562579.1	3	20100602	560604	Balanoglossus clavigerus mitochondrion
FJ769842.1	1	20100301	30414	Balearica pavonina mitochondrion
FJ769841.1	1	20100301	925459	Balearica regulorum mitochondrion
AP009203.1	1	20090110	392899	Balistapus undulatus mitochondrion
AP009204.1	1	20090110	303687	Balistes vetula mitochondrion
AP009205.1	1	20090110	303689	Balistoides conspicillum mitochondrion
FJ970915.1	1	20090707	58923	Bambusa oldhamii chloroplast
FJ752423.1	4	20100615	388974	Bambusicola fytchii mitochondrion
EU165706.1	2	20091009	9083	Bambusicola thoracica mitochondrion
AP009370.1	1	20070414	50458	Barbarea verna chloroplast
AB242162.1	2	20090215	357282	Barbatula toni mitochondrion
AB238966.1	2	20090215	381606	Barbonymus gonionotus mitochondrion
AP010879.1	1	20090127	88660	Barbourisia rufa mitochondrion
AB238965.1	2	20090215	40830	Barbus barbus mitochondrion
AB239600.1	2	20090215	137039	Barbus trimaculatus mitochondrion
AB218883.1	1	20090610	211979	Basiliscus vittatus mitochondrion
AP004405.1	2	20050416	181397	Bassozetus zenkevitchi mitochondrion
AP008988.1	1	20060621	332421	Bathygadus antrodes mitochondrion
AP009400.1	1	20080620	443631	Bathyprion danae mitochondrion
AP009576.1	1	20091130	492029	Bathytroctes breviceps mitochondrion
AP009577.1	1	20091130	492030	Bathytroctes macrolepis mitochondrion
AP009579.1	1	20091130	492031	Bathytroctes michaelsarsi mitochondrion
AP009401.1	1	20080620	443633	Bathytroctes microlepis mitochondrion
AP006738.1	4	20061005	262770	Batrachomoeus trispinosus mitochondrion
AY728228.1	2	20040922	159185	Batrachoseps attenuatus mitochondrion
AY728221.1	2	20040922	57547	Batrachoseps wrightorum mitochondrion
DQ333822.1	1	20060511	363225	Batrachuperus gorganensis mitochondrion
DQ333809.1	1	20060511	156987	Batrachuperus londongensis mitochondrion
DQ333821.1	1	20060511	324332	Batrachuperus mustersi mitochondrion
DQ333815.1	1	20060511	156988	Batrachuperus pinchonii mitochondrion
DQ333817.1	1	20060511	156989	Batrachuperus tibetanus mitochondrion
DQ333818.1	1	20060511	156990	Batrachuperus yenyuanensis mitochondrion
AY521259.2	5	20061114	7038	Bemisia tabaci mitochondrion
EF055880.1	1	20101001	407255	Benedenia hoshinai mitochondrion
HM222526.1	1	20100609	160838	Benedenia seriolae mitochondrion
AJ554057.1	4	20061114	48742	Berardius bairdii mitochondrion
DQ991929.1	1	20110119	407122	Berthellina sp. TLT-2006 mitochondrion
AP004430.1	2	20050416	107241	Beryx decadactylus mitochondrion
DQ993168.1	3	20101005	182780	Beryx mollis mitochondrion
AP002939.1	2	20050416	88663	Beryx splendens mitochondrion
FP885845.1	1	20110118	350892	Beta vulgaris subsp. maritima genotype male-fertile A mitochondrion
FP885834.1	1	20110112	350892	Beta vulgaris subsp. maritima genotype male-fertile B mitochondrion
BA000009.3	9	20071017	3555	Beta vulgaris subsp. vulgaris mitochondrion
X04983.1	3	20000216	3555	Beta vulgaris subsp. vulgaris mitochondrial plasmid a
X00641.1	2	20000216	3555	Beta vulgaris subsp. vulgaris mitochondrial plasmid pO
DQ851108.1	4	20061220	227086	Bigelowiella natans plastid
EU084034.1	1	20080831	106915	Bilobella aurantiaca mitochondrion
AY380531.1	4	20061114	6526	Biomphalaria glabrata mitochondrion strain 1742
AY380567.1	6	20081224	6526	Biomphalaria glabrata mitochondrion strain M-line
EF433576.1	2	20080101	112528	Biomphalaria tenagophila mitochondrion
AY605480.1	3	20061114	52188	Bipes biporus mitochondrion voucher MVZ 236257
AY605481.1	2	20061114	52188	Bipes biporus mitochondrion voucher MVZ 236258
AY605482.1	2	20040922	273521	Bipes canaliculatus mitochondrion
AY605477.1	1	20040829	273520	Bipes tridactylus mitochondrion
EU177871.1	1	20080311	9901	Bison bison mitochondrion
GU946977.1	1	20101130	9901	Bison bison mitochondrion, isolate B853
GU946978.1	1	20101130	9901	Bison bison mitochondrion, isolate b854
GU946979.1	1	20101130	9901	Bison bison mitochondrion, isolate B855
GU946980.1	1	20101130	9901	Bison bison mitochondrion, isolate B877
GU946981.1	1	20101130	9901	Bison bison mitochondrion, isolate B880
GU946982.1	1	20101130	9901	Bison bison mitochondrion, isolate B897
GU946983.1	1	20101130	9901	Bison bison mitochondrion, isolate B925
GU946984.1	1	20101130	9901	Bison bison mitochondrion, isolate B929
GU946985.1	1	20101130	9901	Bison bison mitochondrion, isolate B935
GU946986.1	1	20101130	9901	Bison bison mitochondrion, isolate B959
GU946987.1	1	20101130	9901	Bison bison mitochondrion, isolate B961
GU946988.1	1	20101130	9901	Bison bison mitochondrion, isolate B973
GU946989.1	1	20101130	9901	Bison bison mitochondrion, isolate B979
GU946990.1	1	20101130	9901	Bison bison mitochondrion, isolate B985
GU946991.1	1	20101130	9901	Bison bison mitochondrion, isolate B1005
GU946992.1	1	20101130	9901	Bison bison mitochondrion, isolate B1018
GU946993.1	1	20101130	9901	Bison bison mitochondrion, isolate B1029
GU946994.1	1	20101130	9901	Bison bison mitochondrion, isolate B1031
GU946995.1	1	20101130	9901	Bison bison mitochondrion, isolate B1050
GU946996.1	1	20101130	9901	Bison bison mitochondrion, isolate B1051
GU946997.1	1	20101130	9901	Bison bison mitochondrion, isolate B1091
GU946998.1	1	20101130	9901	Bison bison mitochondrion, isolate B1191
GU946999.1	1	20101130	9901	Bison bison mitochondrion, isolate B1428
GU947000.1	1	20101130	9901	Bison bison mitochondrion, isolate BFN5
GU947001.1	1	20101130	9901	Bison bison mitochondrion, isolate BNBR1
GU947002.1	1	20101130	9901	Bison bison mitochondrion, isolate BTSBH1001
GU947003.1	1	20101130	9901	Bison bison mitochondrion, isolate BTSBH1005
GU947005.1	1	20101130	9901	Bison bison mitochondrion, isolate wElkIsland1
GU947006.1	1	20101130	9901	Bison bison mitochondrion, isolate wElkIsland14
GU947004.1	1	20101130	9901	Bison bison mitochondrion,, isolate BYNP1586
GU946976.1	1	20101130	9901	Bison bison mitochondrion,isolate B790
HM045017.1	1	20100421	9902	Bison bonasus mitochondrion
HQ696578.1	1	20110209	172808	Bittacus pilicornis mitochondrion
AB250107.1	3	20081008	143612	Biwia zezera mitochondrion
EU443257.1	1	20081216	227091	Blanus cinereus mitochondrion
DQ287690.1	2	20090623	4808	Blastocladiella emersonii mitochondrion
EF494739.2	5	20110308	463136	Blastocystis sp. DMP/02-328 mitochondrion
EF494740.2	5	20110308	463137	Blastocystis sp. NandII mitochondrion
EU854321.1	1	20090630	6973	Blattella germanica mitochondrion
AY189817.1	3	20070823	62688	Blumeria graminis f. sp. hordei linear mitochondrial plasmid pBgh
AB177354.1	5	20080926	8574	Boa constrictor mitochondrion
EU827194.1	1	20090918	179646	Bolinus brandaris mitochondrion
AY728235.1	2	20040922	291262	Bolitoglossa n. sp. RLM-2004 mitochondrion
AY458591.1	3	20061208	8345	Bombina bombina mitochondrion
EU789363.1	1	20080713	161274	Bombina maxima mitochondrion
AY585338.1	3	20061114	8346	Bombina orientalis mitochondrion
AY971143.1	1	20070323	8348	Bombina variegata mitochondrion
EU401918.1	1	20090113	130703	Bombus hypocrita sapporoensis mitochondrion, partial
DQ870926.1	1	20070406	130704	Bombus ignitus mitochondrion
AB070263.1	4	20061114	7092	Bombyx mandarina mitochondrion
AF149768.1	6	20060825	7091	Bombyx mori mitochondrion
AB070264.1	7	20090703	7091	Bombyx mori mitochondrion strain C-108
FJ752435.1	4	20100615	64669	Bonasa bonasia mitochondrion
AM919428.1	2	20100527	44932	Boreogadus saida mitochondrion
HQ696579.1	1	20110209	948611	Boreus elegans mitochondrion
EF494179.1	1	20070420	30521	Bos grunniens mitochondrion
AY126697.1	2	20050416	9915	Bos indicus mitochondrion
FJ997262.1	1	20090517	9906	Bos javanicus mitochondrion
GU985279.1	1	20100401	9909	Bos primigenius mitochondrion
AY526085.1	4	20061114	9913	Bos taurus mitochondrion
GU947019.1	1	20101130	9913	Bos taurus mitochondrion, isolate CB86
GU947020.1	1	20101130	9913	Bos taurus mitochondrion, isolate CB86Clone
GU947021.1	1	20101130	9913	Bos taurus mitochondrion, isolate CLH_19
GU947007.1	1	20101130	9913	Bos taurus mitochondrion, isolate H914
GU947008.1	1	20101130	9913	Bos taurus mitochondrion, isolate H941
GU947009.1	1	20101130	9913	Bos taurus mitochondrion, isolate H974
GU947010.1	1	20101130	9913	Bos taurus mitochondrion, isolate H990
GU947011.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1002
GU947012.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1033
GU947013.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1037
GU947014.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1065
GU947015.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1107
GU947016.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1201
GU947017.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1207
GU947018.1	1	20101130	9913	Bos taurus mitochondrion, isolate H1389
HQ184038.1	1	20110128	9913	Bos taurus, isolate Cab1 mitochondrion
HQ184039.1	1	20110128	9913	Bos taurus, isolate Chi466 mitochondrion
HQ184030.1	1	20110128	9913	Bos taurus, isolate Chi467 mitochondrion
HQ184031.1	1	20110128	9913	Bos taurus, isolate Chi490 mitochondrion
HQ184032.1	1	20110128	9913	Bos taurus, isolate Chi597 mitochondrion
HQ184036.1	1	20110128	9913	Bos taurus, isolate Ga15 mitochondrion
HQ184037.1	1	20110128	9913	Bos taurus, isolate Ga16 mitochondrion
HQ184045.1	1	20110128	9913	Bos taurus, isolate Mcg375 mitochondrion
HQ184040.1	1	20110128	9913	Bos taurus, isolate Rom498 mitochondrion
HQ184034.1	1	20110128	9913	Bos taurus, isolate Rom534 mitochondrion
HQ184033.1	1	20110128	9913	Bos taurus, isolate Rom550 mitochondrion
HQ184042.1	1	20110128	9913	Bos taurus, isolate Rom561 mitochondrion
HQ184043.1	1	20110128	9913	Bos taurus, isolate Rom584 mitochondrion
HQ184035.1	1	20110128	9913	Bos taurus, isolate Rom590 mitochondrion
HQ184044.1	1	20110128	9913	Bos taurus, isolate Rom600 mitochondrion
HQ184041.1	1	20110128	9913	Bos taurus,isolate Rom553 mitochondrion
EU183542.1	1	20071116	475769	Bothriometopus macrocnemis mitochondrion
AY691655.1	1	20070512	292347	Bothropolys sp. SP-2004 mitochondrion
AP011568.1	1	20110111	91717	Boulengeromyrus knoepffleri mitochondrial DNA
GQ244464.1	1	20090922	260983	Boulengerula boulengeri mitochondrion
AY954504.1	1	20090924	102246	Boulengerula taitana mitochondrion
AP009215.1	1	20090110	392911	Brachaluteres ulvarum mitochondrion
AP009407.1	2	20080520	10195	Brachionus plicatilis mitochondrion, note: Bp-mtDNA-I
AP009408.1	2	20080520	10195	Brachionus plicatilis mitochondrion
AP011570.1	1	20110111	77838	Brachyhypopomus pinnicaudatus mitochondrion
EU325680.1	2	20090819	15368	Brachypodium distachyon chloroplast
AY960979.1	1	20050326	9354	Bradypus tridactylus mitochondrion
EU861053.1	2	20101105	545417	Branchiostegus albus mitochondrion
EU861054.1	2	20101105	545418	Branchiostegus argentatus mitochondrion
EU861052.1	2	20101105	270562	Branchiostegus japonicus mitochondrion
AB078191.1	3	20060613	7741	Branchiostoma belcheri mitochondrion
AF098298.1	3	20050415	7739	Branchiostoma floridae mitochondrion
DQ407722.1	1	20060528	373177	Branchiostoma japonicum strain Xiamen mitochondrion
Y16474.1	3	20050418	7740	Branchiostoma lanceolatum mitochondrion
DQ019124.1	2	20050510	8853	Branta canadensis haplotype GCC-A mitochondrion
AB073400.1	2	20070823	3708	Brassica napus linear mitochondrial plasmid
AP006444.1	7	20080906	3708	Brassica napus mitochondrion
GQ861354.1	1	20091111	3708	Brassica napus chloroplast
GQ354525.2	3	20100713	13368	Brettanomyces custersianus mitochondrion
AP009618.1	1	20100627	224708	Brevoortia tyrannus mitochondrion
DQ640649.1	3	20060616	86543	Briareum asbestinum mitochondrion
AP011569.1	1	20110111	42636	Brienomyrus brachyistius mitochondrial DNA
AP008929.1	2	20101229	42637	Brienomyrus niger mitochondrion
AB474914.1	1	20100601	587619	Brookesia decaryi mitochondrion
EF222187.1	3	20090326	179895	Brookesia superciliaris mitochondrion, partial
GQ892829.1	1	20091006	222885	Bryopsis hypnoides chloroplast
AY702618.1	2	20061005	89462	Bubalus bubalis mitochondrion
HM640209.1	1	20110302	155086	Bucorvus leadbeateri mitochondrion
FJ006534.1	1	20090731	37181	Budorcas taxicolor mitochondrion
AB127977.1	5	20061114	191197	Buergeria buergeri mitochondrion
DQ275350.1	1	20060928	30331	Bufo gargarizans mitochondrion
AB303363.1	3	20080109	8387	Bufo japonicus mitochondrion
AY458592.1	2	20050708	30335	Bufo melanostictus mitochondrion
AB282841.1	1	20100218	412633	Bufoceratias thele mitochondrion
AY690838.1	2	20090517	10212	Bugula neritina mitochondrion
EU579523.1	1	20081019	8613	Bungarus fasciatus mitochondrion
EU579522.1	1	20081019	8616	Bungarus multicinctus mitochondrion
FJ483517.1	1	20090323	577651	Bunostomum phlebotomum mitochondrion
AF380305.2	3	20050415	30397	Buteo buteo mitochondrion
EU523755.1	1	20080401	6868	Buthus occitanus mitochondrion
EF380351.1	2	20090218	153571	Buxus microphylla chloroplast
HM640210.1	1	20110302	175843	Bycanistes brevis mitochondrion
GQ244466.1	1	20090922	543901	Caecilia volcani mitochondrion
AJ508400.1	5	20061121	37696	Caenolestes fuliginosus mitochondrion
AC186293.1	1	20060512	6238	Caenorhabditis briggsae mitochondrion
AB167462.1	2	20061114	6239	Caenorhabditis elegans mitochondrion
AF193903.1	4	20061114	33653	Cafeteria roenbergensis mitochondrion
AJ404872.2	6	20061114	8499	Caiman crocodilus mitochondrion
EU755254.1	1	20080609	8855	Cairina moschata mitochondrion
FJ785423.1	1	20090422	230833	Callicebus donacophilus mitochondrion
AY363392.1	2	20050522	6763	Callinectes sapidus mitochondrion
EU938373.1	1	20080930	334752	Calliptamus italicus mitochondrion
HM147135.1	2	20101021	7867	Callorhinchus callorynchus mitochondrion
HM147136.1	2	20101021	765184	Callorhinchus capensis mitochondrion
HM147137.1	2	20101021	7868	Callorhinchus milii mitochondrion
AM181016.1	3	20070821	34884	Callorhinus ursinus mitochondrion
EU237477.1	2	20080221	178539	Callyspongia plicifera mitochondrion
GU176340.1	1	20100713	696089	Calosoma sp. BYU-CO241 mitochondrion
AB183287.1	2	20080924	48253	Calotes versicolor mitochondrion
AB474915.1	1	20100601	179907	Calumma parsonii mitochondrion
AJ428413.1	4	20050415	212734	Calycanthus floridus var. glaucus chloroplast
EF212037.2	5	20090730	9837	Camelus bactrianus isolate D1 mitochondrion
EU159113.1	1	20070925	9838	Camelus dromedarius mitochondrion
EF212038.2	5	20090730	419612	Camelus ferus
AY968672.1	2	20060311	135595	Campanulotes bidentatus compar mitochondrion
DQ529236.1	2	20060928	383857	Campodea fragilis mitochondrion
DQ529237.1	2	20060928	383858	Campodea lubbocki mitochondrion
DQ536421.1	2	20060719	61318	Campostoma anomalum mitochondrion
AP011571.1	1	20110111	112143	Campylomormyrus numenius mitochondrial DNA
EU827195.1	1	20090918	543397	Cancellaria cancellata mitochondrion
HQ267968.1	2	20101028	434040	Candida alai culture-collection NRRL:Y-27739 mitochondrion
AF285261.1	3	20050415	237561	Candida albicans SC5314 mitochondrion
FM995165.1	2	20091106	51914	Candida castellii mitochondrion
AJ511533.1	4	20050415	5478	Candida glabrata mitochondrion
GU136397.1	2	20101216	497108	Candida jiufengensis mitochondrion
EU267175.1	1	20091231	5479	Candida maltosa mitochondrion
AY962591.1	4	20061114	273372	Candida metapsilosis strain MCO448 mitochondrion
EU334437.1	2	20090123	148634	Candida neerlandica strain NRRL Y-27057 mitochondrion
AY962590.1	3	20061114	273371	Candida orthopsilosis strain MCO456 mitochondrion
X74411.6	15	20070718	5480	Candida parapsilosis mitochondrion
HQ267969.1	1	20101115	49332	Candida salmanticensis culture-collection CBS:5121 mitochondrion
EF468347.1	1	20091231	52253	Candida sojae mitochondrion
GU126492.1	1	20100706	561895	Candida subhashii mitochondrion
EF536359.1	1	20091231	5486	Candida viswanathii mitochondrion
AY445918.1	4	20080213	186762	Candida zemplinina mitochondrion
DQ480509.1	3	20090325	9614	Canis latrans from Nebraska mitochondrion
DQ480505.1	3	20090325	9612	Canis lupus
EU442884.2	2	20080314	246881	Canis lupus chanco mitochondrion
U96639.2	3	20050418	9615	Canis lupus familiaris mitochondrion
DQ480489.1	3	20090325	9615	Canis lupus familiaris breed German Shepherd mitochondrion
FJ032363.2	3	20090531	554455	Canis lupus laniger mitochondrion
AM711902.1	2	20080320	443256	Canis lupus lupus mitochondrion
AP009184.1	1	20081001	388626	Cantherines pardalis mitochondrion
AP009206.1	1	20090110	303691	Canthidermis maculata mitochondrion
AP006743.1	3	20090227	264150	Canthigaster coronata mitochondrion
AP006744.1	3	20090227	264151	Canthigaster rivulata mitochondrion
AJ554052.1	4	20061114	27604	Caperea marginata mitochondrion
AY514042.1	1	20061230	41070	Capitulum mitella mitochondrion
FJ207525.1	1	20090428	48167	Capra falconeri mitochondrion
FJ207526.1	1	20090428	72542	Capra ibex mitochondrion
FJ207527.1	1	20090428	72543	Capra nubiana mitochondrion
FJ207528.1	1	20090428	80419	Capra pyrenaica mitochondrion
FJ207529.1	1	20090428	72544	Capra sibirica mitochondrion
GU130250.1	1	20100908	380747	Caprella mutica mitochondrion
AB539699.1	1	20101028	703580	Caprella scaura mitochondrion
AP003429.1	1	20090224	9966	Capricornis crispus mitochondrion
FJ207534.1	1	20090428	34865	Capricornis sumatraensis mitochondrion
AP009371.1	1	20070414	3719	Capsella bursa-pastoris chloroplast
AP004444.1	2	20050416	181460	Carangoides armatus mitochondrion
AP004445.1	2	20050416	181461	Caranx melampygus mitochondrion
AP004404.1	2	20050416	181393	Carapus bermudensis mitochondrion
AB006953.1	8	20050414	7957	Carassius auratus mitochondrion
AB111951.1	3	20080510	145527	Carassius auratus auratus mitochondrion
HQ875340.1	1	20110213	763460	Carassius auratus ssp. 'Pingxiang' mitochondrion
AY694420.1	3	20070604	211488	Carassius auratus x Cyprinus carpio mitochondrion
AY771781.1	2	20060325	211491	Carassius auratus x Cyprinus carpio x Carassius cuvieri mitochondrion
GQ903707.1	2	20101031	678552	Carassius auratus x Megalobrama amblycephala pentaploid hybrid mitochondrion
GQ903705.1	1	20091012	678550	Carassius auratus x Megalobrama amblycephala tetraploid hybrid mitochondrion
GQ903706.1	1	20091012	678551	Carassius auratus x Megalobrama amblycephala triploid hybrid mitochondrion
AY714387.1	2	20070604	217509	Carassius carassius mitochondrion
AB045144.1	4	20080510	52617	Carassius cuvieri mitochondrion
GU170401.1	1	20100519	101364	Carassius gibelio mitochondrion
HQ915865.1	1	20110302	36253	Carduelis sinica mitochondrion
HQ915866.1	1	20110302	160760	Carduelis spinus mitochondrion
FJ862792.1	1	20100421	44489	Carettochelys insculpta mitochondrion
EU431224.1	11	20101119	3649	Carica papaya mitochondrion
EU431223.1	2	20080326	3649	Carica papaya chloroplast
AB075953.1	3	20061114	176285	Carios capensismitochondrion
AY366087.1	3	20060719	154811	Carpiodes carpio mitochondrion
HQ336406.1	2	20110210	60419	Castanea mollissima chloroplast
FR691684.1	1	20110203	51338	Castor canadensis mitochondrion
FR691686.1	1	20110203	10185	Castor fiber mitochondrion, isolate in 86
FR691685.1	1	20110203	10185	Castor fiber mitochondrion, isolate al M85
FR691687.1	1	20110203	10185	Castor fiber mitochondrion, isolate bi 121
FR691689.1	1	20110203	10185	Castor fiber mitochondrion, isolate po 134
FR691688.1	1	20110203	10185	Castor fiber mitochondrion, isolate tu 161
AF338713.2	6	20050527	8787	Casuarius casuarius mitochondrion
AP004407.1	2	20050416	181404	Cataetyx rubrirostris mitochondrion
AY463690.1	3	20061121	43455	Cathartes aura mitochondrion
AB547400.1	1	20100927	64686	Cathaya argyrophylla chloroplast
AB127394.1	2	20090215	7971	Catostomus commersonii mitochondrion
AP004417.1	3	20100219	717990	Caulophryne jordani mitochondrion
GU045452.1	1	20091102	88081	Causus defilippi mitochondrion
AJ222767.1	3	20061114	10141	Cavia porcellus mitochondrion
AJ309866.1	4	20061114	9514	Cebus albifrons mitochondrion
AB480043.1	1	20100927	3322	Cedrus deodara chloroplast
AP006006.1	2	20090110	586789	Centropyge loricula mitochondrion
AY803353.1	3	20051026	6876	Centruroides limpidus mitochondrion
U23045.1	13	20061114	28835	Cepaea nemoralis mitochondrion
FJ594739.1	1	20090618	187810	Cephalothrix simula mitochondrion
GU564482.1	1	20101229	743460	Cephalothrix sp. SCS-2010 mitochondrion
FJ478173.1	3	20090612	211228	Cephus cinctus mitochondrion
AB282851.1	1	20100218	412660	Ceratias uranoscopus mitochondrion
AJ242872.1	8	20061114	7213	Ceratitis capitata mitochondrion
EF614270.1	3	20081126	4428	Ceratophyllum demersum chloroplast
Y07726.1	12	20061114	9807	Ceratotherium simum mitochondrion
AB245427.2	2	20091114	9860	Cervus elaphus mitochondrion
HQ191429.1	1	20101028	84701	Cervus elaphus songaricus mitochondrion
GU457434.1	1	20100208	9865	Cervus elaphus xanthopygus mitochondrion
GU457435.1	1	20100208	84702	Cervus elaphus yarkandensis mitochondrion
HM138200.1	1	20101031	84703	Cervus eldi mitochondrion
AB211429.1	3	20081229	151525	Cervus nippon centralis mitochondrion
GU457433.1	1	20100208	92866	Cervus nippon hortulorum mitochondrion
DQ985076.1	1	20061010	37550	Cervus nippon taiouanus mitochondrion
AB218689.1	3	20081229	332176	Cervus nippon yakushimae mitochondrion
AB210267.2	5	20081229	223998	Cervus nippon yesoensis mitochondrion
AP010881.1	1	20090127	565076	Cetomimus sp. AMS I34481001 mitochondrion
AP004423.1	2	20050416	88671	Cetostoma regani mitochondrion
GQ888721.1	1	20100213	63233	Chabertia ovina mitochondrion
EF211990.1	1	20100202	256131	Chaetoderma nitidulum mitochondrion
AP009216.1	1	20090110	392913	Chaetodermis penicilligerus mitochondrion
AP006004.1	1	20070920	215361	Chaetodon auripes mitochondrion
AP006007.1	1	20070920	215363	Chaetodontoplus septentrionalis mitochondrion
EU877951.1	2	20081031	546502	Chaetosoma scaritides mitochondrion
AF494279.1	4	20061114	96477	Chaetosphaeridium globosum mitochondrial DNA
AF494278.1	4	20061114	96477	Chaetosphaeridium globosum chloroplast
AB266748.1	1	20090610	44147	Chalarodon madagascariensis mitochondrion
AB054130.1	5	20090215	42552	Chalceus macrolepidotus mitochondrion
AF321051.1	4	20050415	143942	Chalinolobus tuberculatus mitochondrion
EF222196.1	2	20090403	91906	Chamaeleo africanus mitochondrion
EF222193.1	3	20090326	420385	Chamaeleo arabicus mitochondrion
EF222195.1	3	20090326	420386	Chamaeleo calcaricarens mitochondrion
EF222192.1	3	20090326	179908	Chamaeleo calyptratus mitochondrion
EF222198.1	3	20090326	91907	Chamaeleo chamaeleon mitochondrion
EF222189.1	3	20090326	91908	Chamaeleo dilepis mitochondrion
EF222190.1	3	20090326	420383	Chamaeleo monachus mitochondrion
EF222191.1	3	20090326	420384	Chamaeleo zeylanicus mitochondrion
HM773029.1	1	20100907	871019	Chandlerella quiscali mitochondrion
GU937112.1	1	20110301	215402	Channa argus mitochondrion
AP009060.1	1	20061211	291816	Chanodichthys mongolicus mitochondrion
AY267353.1	3	20061114	55564	Chara vulgaris mitochondrion
DQ229107.1	2	20061114	55564	Chara vulgaris chloroplast
FJ460517.1	2	20100702	80839	Charybdis japonica mitochondrion
AB546636.1	2	20100907	90936	Chattonella marina mitochondrion
AP002915.1	2	20050416	68509	Chauliodus sloani mitochondrion
FJ613418.1	2	20091120	528223	Chauliognathus opacus mitochondrion
AP004415.1	2	20050416	181417	Chaunax abei mitochondrion
AB282833.1	1	20100218	242967	Chaunax pictus mitochondrion
AP004416.1	2	20050416	181418	Chaunax tosaensis mitochondrion
HM778032.1	1	20101010	531291	Cheilanthes lindheimeri chloroplast
GU296101.1	1	20100111	241271	Cheilinus undulatus mitochondrion
AB012104.1	8	20080924	8469	Chelonia mydas mitochondrion
AP009541.1	2	20090227	300230	Chelonodon patoca mitochondrion
EF122793.1	2	20080904	8475	Chelydra serpentina mitochondrion
X58911.1	48	20040909	3559	Chenopodium album mitochondrial plasmid mp1
AY383557.2	3	20050416	6723	Cherax destructor mitochondrion
AP009188.1	1	20081001	388628	Chilomycterus reticulatus mitochondrion
FJ853422.1	1	20090409	36176	Chiloscyllium plagiosum mitochondrion
HM147138.1	2	20101021	765187	Chimaera fulva mitochondrion
AJ310140.1	4	20061114	7871	Chimaera monstrosa mitochondrion
AY676201.1	2	20061114	284239	Chinemys reevesi mitochondrion
DQ526430.1	2	20080514	70433	Chionodraco myersi mitochondrion
AP006229.1	3	20050826	221863	Chirocentrus dorab mitochondrion (partial)
AP008921.1	2	20101229	311466	Chitala blanci mitochondrion
AP008922.1	2	20101229	311467	Chitala lopis mitochondrion
AP008923.1	2	20101229	112145	Chitala ornata mitochondrion
AF008237.1	5	20070910	3054	Chlamydomonas moewusii mitochondrion
U03843.1	10	20061114	3055	Chlamydomonas reinhardtii mitochondrion
FJ423446.1	2	20090610	3055	Chlamydomonas reinhardtii strain CC-503 cw92 mt+ chloroplast
BK000554.2	7	20061114	3055	TPA: Chlamydomonas reinhardtii chloroplast
EF090421.1	3	20081216	103699	Chlamydosaurus kingii mitochondrion
EU715252.2	3	20101207	202578	Chlamys farreri isolate Zhikong mitochondrion
EF473269.1	2	20100319	202578	Chlamys farreri mitochondrion
EF380352.1	1	20070624	13006	Chloranthus spicatus chloroplast
AB001684.1	7	20061114	3077	Chlorella vulgaris chloroplast
AY863426.1	2	20050506	9534	Chlorocebus aethiops mitochondrion
EF597500.1	5	20090326	60710	Chlorocebus pygerythrus mitochondrion
DQ069713.1	1	20060603	60711	Chlorocebus sabaeus mitochondrion
EF597502.1	4	20090326	60712	Chlorocebus tantalus mitochondrion
DQ422812.2	6	20081224	3144	Chlorokybus atmophyticus chloroplast
EF463011.1	3	20081126	3144	Chlorokybus atmophyticus strain SAG 48.80 mitochondrion
AP002918.1	2	20050416	143313	Chlorophthalmus agassizi mitochondrion
AP006567.1	3	20050416	126671	Chlorurus sordidus mitochondrion
AY960980.1	2	20050417	27675	Choloepus didactylus mitochondrion
EU237478.1	2	20080221	479638	Chondrilla aff. nucula CHOND mitochondrion
DQ536427.1	2	20060719	77803	Chondrostoma lemmingii mitochondrion
Z47547.1	21	20100614	2769	Chondrus crispus mitochondrion
EU029161.1	1	20080730	454920	Chorthippus chinensis mitochondrion
HM222967.1	2	20100715	505693	Chromera velia chloroplast
HM222968.1	1	20100708	348535	Chromerida sp. RM11 chloroplast
AB242163.1	2	20090215	322131	Chromobotia macracanthus mitochondrion
DQ991931.1	1	20110119	262608	Chromodoris magnifica mitochondrion
AF069423.1	6	20050415	8479	Chrysemys picta mitochondrion
AB096866.1	3	20050414	185453	Chrysochloris asiatica mitochondrion
EU826485.1	1	20090603	543396	Chrysochroa fulgidissima mitochondrion
AF222718.1	8	20061114	47573	Chrysodidymus synuroideus mitochondrion
FJ752434.1	4	20100615	9088	Chrysolophus amherstiae mitochondrion
HQ221859.1	1	20100922	9089	Chrysolophus pictus mitochondrion
AF352790.1	7	20100213	235600	Chrysomya putoria mitochondrion
DQ304771.1	3	20070311	359504	Chrysopathes formosa mitochondrion
AP011623.1	1	20110114	413239	Chrysoperla nipponensis mitochondrion
EU835853.1	2	20080911	3827	Cicer arietinum chloroplast
AB026193.1	2	20050414	52775	Ciconia boyciana mitochondrion
AB026818.1	2	20050414	8928	Ciconia ciconia mitochondrion
EU237479.1	2	20090113	458489	Cinachyrella kuekenthali mitochondrion
AJ517314.2	5	20050415	7719	Ciona intestinalis mitochondrion
AM292218.1	1	20070829	413601	Ciona intestinalis B CG-2006 mitochondrion
AB079784.1	5	20060227	51511	Ciona savignyi mitochondrion
GQ856147.1	4	20101203	3654	Citrullus lanatus mitochondrion
DQ864733.1	2	20061114	2711	Citrus sinensis chloroplast
FJ839918.1	2	20100509	159417	Clavelina lepadiformis mitochondrion
AM292603.2	1	20091127	159417	Clavelina lepadiformis complete mitochondrion
FN436007.1	1	20100609	666146	Cleome leaf crumple virus associated DNA 1
FJ848374.1	1	20091231	304258	Clinocottus analis mitochondrion
FJ381664.2	4	20100702	79923	Clonorchis sinensis mitochondrion
AP009133.1	1	20070612	7950	Clupea harengus mitochondrion
AP009134.1	2	20070621	30724	Clupea pallasii mitochondrion
AP009615.1	1	20110111	501719	Clupeonella cultriventris mitochondrion
AY741661.1	2	20050106	292503	Clymenella torquata mitochondrion
AY596278.1	2	20061121	183540	Cnemotriccus fuscatus mitochondrion
EU656112.2	3	20081112	457511	Cobitis choii mitochondrion
AY526868.1	1	20050731	143401	Cobitis sinensis mitochondrion
AB054125.1	6	20091028	149980	Cobitis striata mitochondrion
AP009306.1	1	20100713	118131	Cobitis takatsuensis mitochondrion
HQ693844.1	1	20110203	574566	Coccomyxa sp. C-169 plastid
HQ874522.1	1	20110307	574566	Coccomyxa sp. C-169 mitochondrion
AF260826.1	6	20061114	115425	Cochliomyia hominivorax mitochondrion
FJ905813.1	2	20090517	222863	Coelodonta antiquitatis mitochondrion
AB282834.1	1	20100218	412625	Coelophrys brevicaudata mitochondrion
AP002929.1	3	20100826	143328	Coelorinchus kishinouyei mitochondrion
EF044213.1	2	20061114	13443	Coffea arabica chloroplast
AP011558.1	1	20100627	686568	Coilia lindmani mitochondrion
AP009135.1	2	20070621	365059	Coilia nasus mitochondrion
AP011559.1	1	20100627	686569	Coilia reynaldi mitochondrion
FJ261955.1	3	20091211	4505	Coix lacryma-jobi chloroplast
AB114446.1	3	20080926	52435	Coleonyx variegatus mitochondrion
HM447239.1	1	20100708	240159	Collichthys lucidus mitochondrion
HM219223.1	2	20110310	240160	Collichthys niveatus mitochondrion
AY863427.1	3	20050527	33548	Colobus guereza mitochondrion
AP010863.1	2	20101229	391219	Coloconger cadenati mitochondrion
AP002932.1	2	20050416	129043	Cololabis saira mitochondrion
DQ643833.1	2	20060616	242718	Colpophyllia natans mitochondrion
GU908131.1	2	20101203	8932	Columba livia mitochondrion
AB038381.2	4	20101229	7943	Conger myriaster mitochondrion
AP009580.1	1	20091130	492036	Conocara macropterum mitochondrion
AP009581.1	1	20091130	492037	Conocara murrayi mitochondrion
FJ905109.1	2	20101231	646521	Contracaecum rudolphii B Bullini et al., 1986 mitochondrion
EU827198.1	1	20090918	289022	Conus borgesi mitochondrion
DQ862058.1	1	20070114	6494	Conus textile mitochondrion
AY265417.1	4	20050416	27828	Cooperia oncophora mitochondrion
EU427334.1	1	20081224	498928	Coptosoma bifaria mitochondrion
EU371503.2	2	20080514	475271	Beauveria bassiana mitochondrion
EU100742.1	2	20100619	176275	Cordyceps bassiana mitochondrion
EU100743.1	2	20100619	118266	Cordyceps brongniartii mitochondrion
DQ102703.1	2	20061114	334015	Coreana raphaelis mitochondrion
AB034824.1	3	20050414	59291	Coregonus lavaretus mitochondrion
DQ347951.2	3	20080705	354116	Coreoleuciscus splendidus mitochondrion
AP005990.1	1	20070920	215345	Coreoperca kawamebari mitochondrion
HQ269363.1	2	20110128	121492	Corticium candelabrum mitochondrion, isolate DL049
Y18522.2	7	20050505	75140	Corvus frugilegus mitochondrion
FJ171323.1	2	20090327	559164	Corydalus cornutus mitochondrion
AB054128.1	6	20090215	149983	Corydoras rabauti mitochondrion
HQ207704.1	2	20110123	4312	Corynocarpus laevigata chloroplast
FJ154897.1	1	20100627	217443	Cotesia vestalis mitochondrion
EU332751.1	1	20101231	290628	Cottus hangiongensis mitochondrion
EU332750.1	1	20101231	182643	Cottus poecilopus mitochondrion
AP004442.1	2	20050416	137881	Cottus reinii mitochondrion
AP010823.1	2	20100421	548806	Coturnicops exquisitus mitochondrion
AB073301.1	4	20070818	46218	Coturnix chinensis mitochondrion
AP003195.2	3	20050416	93934	Coturnix japonica mitochondrion
AY898626.1	1	20060718	175798	Cranoglanis bouderius mitochondrion
EU672832.1	25	20100603	558553	Crassostrea angulata isolate Cangtaiwh-9 mitochondrion
FJ841965.1	2	20100908	558553	Crassostrea angulata mitochondrion
EU672835.1	25	20100603	94323	Crassostrea ariakensis
AF177226.1	2	20061114	29159	Crassostrea gigas mitochondrion
EU672834.1	1	20090304	298176	Crassostrea hongkongensis isolate Hainan big#1 mitochondrion
EU266073.1	2	20081105	298176	Crassostrea hongkongensis mitochondrion
FJ841967.1	2	20100908	167541	Crassostrea iredalei mitochondrion
HM015198.1	1	20110309	121615	Crassostrea nippona mitochondrion
EU672833.1	25	20100603	94324	Crassostrea sikamea mitochondrion
AY905542.2	4	20080326	6565	Crassostrea virginica mitochondrion
DQ390542.2	4	20070723	10029	Cricetulus griseus mitochondrion
AF467886.1	4	20061114	184539	Crioceris duodecimpunctata mitochondrion
FJ986302.1	3	20090603	165446	Cristaria plicata mitochondrion
AY769264.1	2	20050416	36802	Crocidura russula mitochondrion
HM488008.2	2	20110313	184234	Crocodylus johnsoni mitochondrion
GU144287.1	1	20101028	184236	Crocodylus mindorensis mitochondrion
HQ585889.1	1	20110309	184237	Crocodylus moreletii mitochondrion
AJ810452.1	5	20080722	8501	Crocodylus niloticus mitochondrion
GU144286.1	1	20101028	184238	Crocodylus palustris mitochondrion
HM488007.1	2	20110313	184238	Crocodylus palustris mitochondrion
AJ810453.1	5	20080722	8502	Crocodylus porosus mitochondrion
DQ353946.1	2	20080614	68455	Crocodylus siamensis mitochondrion
AP011560.1	1	20110111	299317	Cromeria nilotica mitochondrial DNA
M91245.1	10	20061114	7980	Crossostoma lacustre mitochondrion
HM641837.1	1	20100811	35024	Crotalus horridus mitochondrion
AP009372.1	1	20070414	78192	Crucihimalaya wallichii chloroplast
AF218210.1	4	20061114	5116	Cryphonectria parasitica mitochondrial plasmid pleC9
Y12637.1	5	19990211	5116	Cryphonectria parasitica mitochondrial plasmid Y12637
AY101381.1	2	20050416	178876	Cryptococcus neoformans var. grubii strain H99 mitochondrion
AP009377.1	4	20081126	3369	Cryptomeria japonica chloroplast
GQ358203.1	2	20100723	2898	Cryptomonas paramecium plastid
AB282850.1	1	20100218	412659	Cryptopsaras couesii mitochondrion
EU016194.1	1	20080331	187623	Cryptopygus antarcticus mitochondrion
EU391390.1	3	20081224	7959	Ctenopharyngodon idella mitochondrion
HQ891005.1	1	20110213	7959	Ctenopharyngodon idella mitochondrion
AP006038.1	1	20090822	215401	Cubiceps pauciradiatus mitochondrion
GU176341.1	1	20100713	186067	Cucujus clavipes mitochondrion
AY182376.1	3	20061114	28833	Cucumaria miniata mitochondrion
AJ970307.1	3	20090310	3659	Cucumis sativus chloroplast
DQ119058.1	3	20060803	3659	Cucumis sativus cultivar Baekmibaekdadagi plastid
DQ865975.1	1	20070529	3659	Cucumis sativus cultivar GY14 chloroplast
DQ865976.1	1	20070529	3659	Cucumis sativus strain CHIPPER chloroplast
GQ856148.1	4	20101203	3663	Cucurbita pepo mitochondrion
AB445125.1	2	20090113	240156	Culaea inconstans mitochondrion
HQ724614.1	1	20110131	38569	Culex pipiens pipiens from Tunisia mitochondrion
HQ724615.1	1	20110131	38569	Culex pipiens pipiens from Greece mitochondrion
HQ724616.1	1	20110131	38569	Culex pipiens pipiens from Turkey mitochondrion
GU188856.1	1	20101001	7176	Culex quinquefasciatus mitochondrion
HQ724617.1	1	20110131	7176	Culex quinquefasciatus from USA mitochondrion
AB361004.1	3	20090510	198116	Culicoides arakawae mitochondrion
GU190362.1	1	20091208	194366	Culter alburnus mitochondrion
GU063864.1	3	20091111	68730	Cuon alpinus mitochondrion
FJ763736.1	1	20100301	74909	Cuora amboinensis mitochondrion
AY874540.1	1	20070601	72008	Cuora aurocapitata mitochondrion
EU708434.1	1	20090203	204965	Cuora flavomarginata mitochondrion
EU809939.1	1	20100503	204968	Cuora galbinifrons mitochondrion
GQ889364.1	1	20100730	176193	Cuora pani mitochondrion
EU189132.1	2	20071223	476139	Cuscuta exaltata chloroplast
AM711639.1	1	20070828	35886	Cuscuta gronovii complete chloroplast
EU189133.1	2	20071223	437280	Cuscuta obtusiflora chloroplast
AM711640.1	1	20070828	4129	Cuscuta reflexa complete chloroplast
AB002583.1	5	20071220	45157	Cyanidioschyzon merolae strain 10D chloroplast
D89861.1	4	20090426	45157	Cyanidioschyzon merolae mitochondrion
AY286123.1	1	20040430	45157	Cyanidioschyzon merolae strain DBV201 chloroplast
AF022186.2	8	20050415	2771	Cyanidium caldarium chloroplast
U30821.1	5	20050417	2762	Cyanophora paradoxa chloroplast
HQ849544.1	1	20110208	2762	Cyanophora paradoxa, strain CCMP 329, mitochondrion
HQ896033.1	1	20110313	125286	Cyanoptila cyanomelana mitochondrion
AP009339.1	1	20070628	54799	Cycas taitungensis chloroplast
AP009381.1	2	20080202	54799	Cycas taitungensis mitochondrion
EF067858.1	1	20080531	260631	Cyclemys atripons mitochondrion
AB126082.1	2	20090215	154813	Cycleptus elongatus mitochondrion
DQ866052.1	2	20070801	395993	Cydistomyia duplonotata mitochondrion
AP010870.1	2	20101229	556252	Cyema atrum mitochondrion
FJ379295.1	2	20100717	8868	Cygnus atratus mitochondrion
DQ083161.1	2	20060208	110926	Cygnus columbianus mitochondrion
GQ888712.1	1	20100213	53338	Cylicocyclus insignis mitochondrion
AB179619.1	4	20080924	186578	Cylindrophis ruffus mitochondrion
EU827200.1	1	20090918	543398	Cymatium parthenopeum mitochondrion
AP009128.1	3	20081119	50794	Cymatogaster aggregata mitochondrion
EU827199.1	1	20090918	543401	Cymbium olla mitochondrion
GQ380410.1	1	20101230	341728	Cynoglossus abbreviatus mitochondrion
EU366230.1	1	20090610	244447	Cynoglossus semilaevis mitochondrion
AP010853.1	2	20101229	391196	Cynoponticus ferox mitochondrion
EU877949.1	2	20081031	546486	Cyphon sp. BT0012 mitochondrion
AB070206.1	2	20090215	28791	Cyprinella lutrensis mitochondrion
DQ536422.1	2	20060719	13477	Cyprinella spiloptera mitochondrion
EF442803.2	2	20070330	28742	Cyprinodon rubrofluviatilis mitochondrion
X61010.1	90	20050418	7962	Cyprinus carpio mitochondrion
AB182653.1	4	20080705	283373	Cypselurus hiraii mitochondrion
AM181028.1	3	20070821	39293	Cystophora cristata mitochondrion
EU913478.1	1	20081019	8707	Daboia russellii mitochondrion
AP002947.1	2	20050416	143342	Dactyloptena peterseni mitochondrion
AP004440.1	2	20050416	181453	Dactyloptena tiltoni mitochondrion
AP004102.1	4	20061114	75939	Dallia pectoralis mitochondrion
FJ207530.1	1	20090428	9931	Damaliscus pygargus mitochondrion
FJ204233.1	3	20090619	317680	Damon diadema mitochondrion
AP002936.1	2	20050416	143336	Danacetichthys galathenus mitochondrion
AC024175.3	9	20050414	7955	Danio rerio mitochondrion
AF117817.1	4	20050415	6669	Daphnia pulex mitochondrion
DQ340828.1	1	20060216	6669	Daphnia pulex strain A1 mitochondrion
Y11832.1	10	20050418	9361	Dasypus novemcinctus mitochondrion
AY795973.1	2	20060302	9280	Dasyurus hallucatus mitochondrion
AM905039.1	2	20080818	31869	Daubentonia madagascariensis mitochondrion
DQ898156.1	3	20061114	4039	Daucus carota chloroplast
EU591677.1	1	20090430	318828	Davidius lunatus mitochondrion
DQ508940.1	3	20080822	4959	Debaryomyces hansenii mitochondrion
AP011546.1	1	20100205	366427	Decipisagitta decipiens mitochondrion
DQ343647.1	2	20081229	36307	Deinagkistrodon acutus mitochondrion
GQ354526.1	3	20100715	5007	Dekkera bruxellensis mitochondrion
EU557094.1	1	20090203	103584	Delphinus capensis mitochondrion
FJ970916.1	1	20090810	257763	Dendrocalamus latiflorus chloroplast
FJ379296.1	2	20100717	60182	Dendrocygna javanica mitochondrion
AM904727.1	2	20080818	42325	Dendrohyrax dorsalis mitochondrion
FJ372991.1	1	20091130	151771	Dendronephthya gigantea mitochondrion
HM174252.1	1	20101004	169306	Dendropoma gregarium mitochondrion
HM174253.1	1	20101004	169307	Dendropoma maximum mitochondrion
AP007276.1	1	20060224	299321	Denticeps clupeoides mitochondrion
EU137664.1	1	20081230	441219	Deracantha onos mitochondrion
AP010851.1	2	20101229	391192	Derichthys serpentinus mitochondrion
AY463155.1	3	20061114	115427	Dermatobia hominis mitochondrion,
GQ465336.1	2	20100109	6954	Dermatophagoides farinae mitochondrion
EU884425.1	1	20090410	6956	Dermatophagoides pteronyssinus mitochondrion
GQ469891.1	1	20101223	6956	Dermatophagoides pteronyssinus mitochondrion
GQ244467.1	1	20090922	118251	Dermophis mexicanus mitochondrion
AY500367.1	3	20061114	62313	Desmarestia viridis mitochondrion
AY728227.1	2	20040922	52100	Desmognathus fuscus mitochondrion
AY728225.1	2	20040922	52108	Desmognathus wrighti mitochondrion
EU871947.1	1	20090521	208481	Diadegma semiclausum mitochondrion
AP009167.1	2	20070920	241258	Diagramma pictum mitochondrion
AP002923.1	2	20050416	143323	Diaphus splendidus mitochondrion
FJ240227.1	1	20091001	40085	Diatraea saccharalis mitochondrion
GQ368657.1	1	20090910	294758	Dicamptodon aterrimus mitochondrion
AB282842.1	1	20100218	412635	Diceratias pileatus mitochondrion
FJ905816.1	2	20090517	89632	Dicerorhinus sumatrensis mitochondrion
FJ905814.1	2	20090517	9805	Diceros bicornis mitochondrion
DQ336395.4	4	20080627	361072	Dictyostelium citrinum mitochondrion
AB000109.1	14	20090515	44689	Dictyostelium discoideum mitochondrion
EU275727.1	2	20080627	261658	Dictyostelium fasciculatum mitochondrion
AY500368.1	3	20061114	2876	Dictyota dichotoma mitochondrion
Z29573.1	20	20061114	9267	Didelphis virginiana mitochondrion
AB008539.1	12	20080924	56549	Dinodon semicarinatus mitochondrion
AY016013.1	3	20050416	147464	Dinornis giganteus mitochondrion
AP009177.1	2	20070920	229062	Diodon holocanthus mitochondrion
EF380353.1	1	20070624	145284	Dioscorea elephantipes chloroplast
DQ985706.1	4	20070420	60516	Diphyllobothrium latum mitochondrion
AB268585.1	2	20090113	64604	Diphyllobothrium nihonkaiense mitochondrion
AP004408.1	2	20050416	181406	Diplacanthopoma brachysoma mitochondrion
GU949545.1	1	20100401	747040	Diploid Megalobrama amblycephala x Xenocypris davidi mitochondrion
AY605474.1	2	20061114	94420	Diplometopon zarudnyi mitochondrion
AB034825.1	3	20050414	91975	Diplophos taenia mitochondrion
FN313539.1	1	20091127	168635	Diplosoma listerianum mitochondrion
AJ537512.1	4	20061114	6287	Dirofilaria immitis mitochondrion
AY585339.1	3	20061114	97956	Discoglossus galganoi mitochondrion
DQ643965.1	4	20061114	386609	Discosoma sp. CASIZ 168915 mitochondrion
DQ643966.1	4	20061114	386610	Discosoma sp. CASIZ 168916 mitochondrion
DQ026431.1	1	20080906	70541	Distoechodon tumirostris mitochondrion
AB241052.1	2	20060816	38614	Distoechurus pennatus mitochondrion
FJ859906.1	3	20091027	560959	Ditaxis biseriata mitochondrion
AP009129.1	3	20081119	83878	Ditrema temminckii mitochondrion
AP009181.1	2	20070920	223795	Doederleinia berycoides mitochondrion
AF366350.1	4	20061114	159310	Dogania subplana mitochondrion
AB176541.1	6	20060227	76841	Doliolum nationalis mitochondrion
DQ536426.1	2	20060719	336262	Dorosoma cepedianum mitochondrion
AP009136.1	1	20070612	224713	Dorosoma petenense mitochondrion
EU068697.1	5	20101130	346249	Dosidicus gigas mitochondrion
AP009373.1	1	20070414	171822	Draba nemorosa chloroplast
DQ887676.1	2	20061114	224735	Drimys granadensis chloroplast
AF338711.1	4	20050527	8790	Dromaius novaehollandiae mitochondrion
AJ508402.2	6	20061114	33562	Dromiciops gliroides partial mitochondrion
BK006336.1	1	20080620	7217	Drosophila ananassae mitochondrion
BK006335.1	1	20080620	7220	Drosophila erecta mitochondrion
BK006341.1	1	20080620	7222	Drosophila grimshawi mitochondrion
FJ447340.1	4	20100907	47316	Drosophila littoralis mitochondrion
AF200830.1	4	20050415	7226	Drosophila mauritiana mitochondrion
U37541.1	11	20080813	7227	Drosophila melanogaster mitochondrion
BK006339.1	1	20080620	7230	Drosophila mojavensis mitochondrion
BK006337.1	1	20091001	7234	Drosophila persimilis mitochondrion
FJ899745.1	1	20100111	7237	Drosophila pseudoobscura mitochondrion
AF200832.1	4	20050415	7238	Drosophila sechellia type line mitochondrion
AF200833.1	4	20050415	7240	Drosophila simulans mitochondrion
BK006340.1	1	20080620	7244	Drosophila virilis mitochondrion
BK006338.1	1	20080620	7260	Drosophila willistoni mitochondrion
X03240.1	54	20081023	7245	Drosophila yakuba mitochondrion
DQ780879.1	4	20061220	51359	Dryocopus pileatus mitochondrion
AJ421723.1	4	20061114	29137	Dugong dugon mitochondrion
GQ250045.1	4	20100615	3046	Dunaliella salina mitochondrion
GQ250046.1	4	20100615	3046	Dunaliella salina chloroplast
GU591327.1	1	20100609	400756	Durinskia baltica chloroplast
EU427335.1	1	20081224	191328	Dysdercus cingulatus mitochondrion
FN562581.1	2	20100602	39298	Echinocardium cordatum mitochondrion
AB208063.1	3	20090118	519352	Echinococcus canadensis mitochondrion
AF346403.1	3	20080517	519353	Echinococcus equinus mitochondrion
AF297617.1	4	20051129	6210	Echinococcus granulosus mitochondrion
AB018440.2	6	20070915	6211	Echinococcus multilocularis mitochondrion
AB208545.1	2	20090220	6212	Echinococcus oligarthrus mitochondrion
AB235846.1	3	20090118	446560	Echinococcus ortleppi mitochondrion
AB208064.1	2	20081203	260967	Echinococcus shiquicus mitochondrion
AB208546.1	1	20070414	6213	Echinococcus vogeli mitochondrion
AJ400734.2	4	20061114	9371	Echinops telfairi mitochondrion
AF348079.1	2	20050415	162630	Echinosorex gymnura mitochondrion
AY795975.1	2	20060302	164528	Echymipera rufescens australis mitochondrion
FP102296.1	2	20091123	2880	Ectocarpus siliculosus chloroplast
EU237480.1	2	20090113	458493	Ectyoplasia ferox mitochondrion
FN557213.1	1	20101021	685443	Eel Virus European X complete genome, viral cRNA, isolate 153311
EU072995.1	1	20070807	458089	Egretta eulophotes mitochondrion
AB054131.1	7	20090215	480914	Eigenmannia sp. CBM-ZF-10620 mitochondrion
AY217738.1	6	20100723	5802	Eimeria tenella chloroplast
GQ181130.1	1	20090603	648042	Elaphe poryphyracea mitochondrion
DQ873526.1	2	20081112	109298	Elaphodus cephalophus mitochondrion
AP004455.1	2	20050416	86232	Eleotris acanthopoma mitochondrion
AB096867.1	3	20050414	213657	Elephantulus sp. VB001 mitochondrion
DQ316068.1	1	20060208	9783	Elephas maximus mitochondrion
GU323362.1	1	20100627	488323	Elimaea cheni mitochondrion
GU945502.1	2	20100915	241046	Ellipes minuta mitochondrion
AB051070.1	6	20101229	54905	Elops hawaiensis mitochondrion
AP004807.1	4	20101229	7928	Elops saurus mitochondrion
EU599581.1	3	20081229	188477	Elysia chlorotica mitochondrion
HQ896034.1	1	20110313	504295	Emberiza chrysophrys mitochondrion
HQ896035.1	1	20110313	267980	Emberiza tristrami mitochondrion
AY016015.1	3	20050416	147466	Emeus crassus mitochondrion
AY342361.1	4	20050416	2903	Emiliania huxleyi mitochondrion
AY741371.1	1	20050721	2903	Emiliania huxleyi strain CCMP 373 chloroplast
AP004446.1	2	20050416	181464	Emmelichthys struhsakeri mitochondrion
AP009137.1	1	20070612	184585	Engraulis encrasicolus mitochondrion
AB040676.1	6	20101229	42892	Engraulis japonicus mitochondrial DNA
AB291077.1	2	20071011	34882	Enhydra lutris mitochondrion
DQ343650.1	2	20081229	46265	Enhydris plumbea mitochondrion
FJ456949.1	1	20090618	575841	Enithares tibialis mitochondrion
AP006008.1	1	20090826	215367	Enoplosus armatus mitochondrion
AY728216.1	2	20040922	57550	Ensatina eschscholtzii mitochondrion
EU281143.1	2	20081229	51028	Enterobius vermicularis mitochondrion
AB477459.1	2	20110114	590984	Entoria okinawaensis mitochondrion
FJ790313.1	2	20100315	622658	Eophreatoicus sp. 14 FK-2009 mitochondrion
FJ483847.1	1	20091130	577681	Eothenomys chinensis mitochondrion
AP010819.1	2	20090204	173280	Ephedra equisetina chloroplast
EU591678.1	1	20090430	515277	Ephemera orientalis mitochondrion
EU237481.1	2	20080221	6052	Ephydatia muelleri mitochondrion
AY916130.1	3	20061114	34391	Epidermophyton floccosum mitochondrion
M81884.1	16	20081019	4177	Epifagus virginiana chloroplast
AB110093.1	3	20061114	231028	Epigonichthys maldivensis mitochondrion
EU043377.1	2	20091019	215347	Epinephelus akaara mitochondrion
FJ594964.1	1	20091231	323802	Epinephelus bruneus mitochondrion
EU043376.1	2	20091019	94232	Epinephelus coioides mitochondrion
FJ472837.1	1	20081229	310571	Epinephelus lanceolatus mitochondrion
HQ660062.1	1	20110308	310571	Epinephelus lanceolatus mitochondrion
FJ594966.1	1	20091231	232417	Epinephelus septemfasciatus mitochondrion
DQ666064.1	3	20071101	172520	Epiperipatus biolleyi mitochondrion
AF348081.1	3	20050415	150090	Episoriculus fumidus mitochondrion
AJ278504.1	2	20050415	7764	Eptatretus burgeri mitochondrion
GU191334.1	2	20101216	3258	Equisetum arvense chloroplast
X97337.1	8	20050418	9793	Equus asinus mitochondrion
X79547.1	11	20050418	9796	Equus caballus mitochondrion
EF490071.1	1	20081224	326972	Eremias brenchleyi mitochondrion
AM904729.1	2	20080818	481707	Eremitalpa granti mitochondrion
EU520642.1	1	20080401	507470	Eremobates cf. palpisetulosus SEM-2008 mitochondrion
AE016821.1	6	20100309	284811	Ashbya gossypii ATCC 10895 mitochondrion
DQ533485.1	1	20081101	27787	Eretmochelys imbricata mitochondrion
AM181027.1	3	20070821	39304	Erignathus barbatus mitochondrion
AP011228.1	1	20090731	154815	Erimyzon oblongus mitochondrion
X88898.2	16	20020611	9365	Erinaceus europaeus mitochondrion
FJ455506.1	1	20081229	168195	Eriocheir hepuensis mitochondrion
FJ455505.1	1	20081229	95603	Eriocheir japonica mitochondrion
AY274302.1	1	20050419	95602	Eriocheir sinensis mitochondrion
FJ685653.1	1	20090528	364026	Eriogyna pyretorum mitochondrion
HQ713469.1	1	20110131	337360	Erodium carvifolium chloroplast
HM125536.1	2	20110210	28960	Erodium texanum plastid
AY442348.1	3	20050416	27687	Erpetoichthys calabaricus mitochondrion
AJ554053.1	4	20061114	9764	Eschrichtius robustus mitochondrion
AB239594.1	2	20090215	353259	Esomus metallicus mitochondrion
AP004103.1	5	20061114	8010	Esox lucius mitochondrion
AY341348.2	4	20060719	54341	Etheostoma radiosum mitochondrion
AP009138.1	1	20070612	297798	Ethmalosa fimbriata mitochondrion
AP009505.1	3	20091127	50796	Etroplus maculatus mitochondrion
AP009139.1	1	20070612	224716	Etrumeus teres mitochondrion
HM174254.1	1	20101004	765164	Eualetes tulipa mitochondrion
AP006473.1	2	20050416	160595	Eubalaena australis mitochondrion
AP006474.1	2	20050416	302098	Eubalaena japonica mitochondrion
AP009217.1	1	20090110	392919	Eubalichthys mosaicus mitochondrion
AY780259.1	3	20060111	71271	Eucalyptus globulus subsp. globulus chloroplast
HM347959.1	1	20101013	71139	Eucalyptus grandis chloroplast
HM583652.1	1	20100827	868577	Euchorthippus fusigeniculatus mitochondrion
AF338710.2	5	20050527	8805	Eudromia elegans mitochondrion
EU410487.1	2	20090115	497866	Eudynamys taitensis mitochondrion
AF362763.1	3	20061114	37083	Eudyptula minor mitochondrion
X70810.2	55	20081023	3039	Euglena gracilis chloroplast
AJ294725.1	5	20061114	3037	Euglena longa chloroplast
AB371086.1	1	20090603	40322	Eulemur fulvus fulvus mitochondrion
AB371087.1	1	20090603	27680	Eulemur fulvus mayottensis mitochondrion
AB371088.1	1	20090603	30603	Eulemur macaco macaco mitochondrion
AM905040.1	2	20080818	34828	Eulemur mongoz mitochondrion
AJ428578.2	5	20061114	34886	Eumetopias jubatus mitochondrion
HM126547.1	1	20100907	476664	Euphaea formosa mitochondrion
AP011544.1	2	20101102	143416	Euphlyctis hexadactylus mitochondrion
FJ830540.1	2	20100921	367774	Eupolyphaga sinensis mitochondrion
AY728217.1	2	20040922	134758	Eurycea bislineata mitochondrion
AB046473.2	3	20101229	55117	Eurypharynx pelecanoides mitochondrion
EU344978.1	2	20090115	188341	Eurystomus orientalis mitochondrion
GU176344.1	1	20100713	694456	Euspilotus scissus mitochondrion
AP010885.1	1	20090127	565079	Eutaeniophorus festivus mitochondrion
AP004424.1	2	20050416	181429	Eutaeniophorus sp. 033-Miya mitochondrion
AB099716.1	3	20071102	8228	Euthynnus alletteratus mitochondrion
FJ593187.1	1	20090913	27486	Evania appendigaster mitochondrion
AP002933.1	2	20050416	143332	Exocoetus volitans mitochondrion
EF560650.1	2	20090422	392227	Exopalaemon carinicauda mitochondrion
HQ322500.1	1	20101028	191189	Exorista sorbillans mitochondrion
AP010866.1	2	20101229	556245	Facciolella oxyrhyncha mitochondrion
EU254477.1	2	20080606	180217	Fagopyrum esculentum subsp. ancestrale chloroplast
AF090338.1	6	20050415	8954	Falco peregrinus mitochondrion
DQ780880.1	4	20061220	56350	Falco sparverius mitochondrion
EU196361.1	1	20080930	100819	Falco tinnunculus mitochondrion
EU497054.1	1	20090602	171294	Farfantepenaeus californiensis mitochondrion
AF216697.1	4	20061114	6192	Fasciola hepatica mitochondrion
EU652694.1	2	20090603	111367	Fejervarya cancrivora mitochondrion
AY158705.1	6	20061114	110108	Fejervarya limnocharis mitochondrion
U20753.1	6	20050417	9685	Felis catus mitochondrion
DQ518969.1	4	20071004	139456	Fenneropenaeus chinensis mitochondrion
FJ466687.2	5	20100713	4606	Festuca arundinacea chloroplast
AP005987.1	2	20080116	215343	Fistularia commersonii mitochondrion
AF049132.1	5	20050415	73431	Florometra serratissima mitochondrion
GU196268.1	1	20100727	51328	Floydiella terrestris chloroplast
DQ157889.1	1	20060620	97271	Flustrellidra hispida mitochondrion
JF345175.1	1	20110302	101020	Fragaria vesca subsp. vesca chloroplast
EU165707.1	2	20091009	472989	Francolinus pintadeanus mitochondrion
EU016196.1	1	20080331	106928	Friesea grisea mitochondrion
AY494079.1	3	20061114	49266	Fucus vesiculosus mitochondrion
FM957154.1	2	20091130	49266	Fucus vesiculosus chloroplast
FJ445394.1	2	20090130	54267	Fundulus diaphanus mitochondrion
FJ445396.1	2	20090130	34779	Fundulus grandis mitochondrion
FJ445402.1	2	20090130	8078	Fundulus heteroclitus isolate 01 pop-variant Maine mitochondrion
FJ445400.1	2	20090130	8078	Fundulus heteroclitus mitochondrion
AP006776.1	1	20081016	34782	Fundulus olivaceus mitochondrion
AB185326.1	2	20080924	179927	Furcifer oustaleti mitochondrion
AY945289.1	3	20080704	5507	Fusarium oxysporum strain F11 mitochondrion
AF124844.1	5	20030703	96317	Fusarium oxysporum f. sp. matthiolae mitochondrial plasmid pFOXC3
AF124843.1	5	20030703	96318	Fusarium oxysporum f. sp. raphani mitochondrial plasmid pFOXC2
EU827197.1	1	20090918	543403	Fusiturris similis mitochondrion
X99772.1	8	20050418	8049	Gadus morhua mitochondrion
DQ356941.1	2	20061115	8052	Gadus ogac haplotype 002 mitochondrion
AB371092.1	1	20090603	9465	Galago senegalensis mitochondrion
HM106487.1	1	20110310	126305	Galaxias gollumoides mitochondrion
AP004104.1	4	20061114	61620	Galaxias maculatus mitochondrion
HM106488.1	1	20110310	126308	Galaxias sp. 'southern' mitochondrion
AY833419.1	2	20061114	202257	Galemys pyrenaicus mitochondrion
AJ428849.1	4	20061114	482537	Galeopterus variegatus mitochondrion
AY510475.1	5	20061114	10390	Gallid herpesvirus 2
HQ896036.1	1	20110313	9123	Gallinula chloropus mitochondrion
AP010821.1	2	20100421	547194	Gallirallus okinawae mitochondrion
X52392.1	56	20050418	9031	Gallus gallus mitochondrion, strain white Leghorn
GU261718.1	2	20101205	9031	Gallus gallus isolate 20332 breed Lv'erwu mitochondrion
GU261701.1	2	20101205	9031	Gallus gallus isolate HD38 breed Huaiyang mitochondrion
GU261681.1	2	20101205	9031	Gallus gallus isolate HH131 breed Autochthonic chicken mitochondrion
GU261714.1	2	20101205	9031	Gallus gallus isolate J37 breed Jiangbian mitochondrion
GU261713.1	2	20101205	9031	Gallus gallus isolate J41 breed Jiangbian mitochondrion
GU261700.1	2	20101205	9031	Gallus gallus isolate Man1 breed Autochthonic chicken mitochondrion
GU261691.1	2	20101205	9031	Gallus gallus isolate Man2 breed Autochthonic chicken mitochondrion
GU261685.1	2	20101205	9031	Gallus gallus isolate yin12 breed Autochthonic chicken mitochondrion
GU261698.1	2	20101205	9031	Gallus gallus isolate yin21 breed Autochthonic chicken mitochondrion
GU261680.1	2	20101205	9031	Gallus gallus isolate YP63 breed Autochthonic chicken mitochondrion
GU261697.1	2	20101205	9031	Gallus gallus isolate YP66 breed Autochthonic chicken mitochondrion
GU261675.1	2	20101205	9031	Gallus gallus isolate YP18793 breed Xuefeng mitochondrion
GU261676.1	2	20101205	9031	Gallus gallus isolate YP18844 breed Wuding mitochondrion
GU261677.1	2	20101205	9031	Gallus gallus isolate YP19263 breed Xianju mitochondrion
GU261678.1	2	20101205	9031	Gallus gallus isolate YP19315 breed Gushi mitochondrion
GU261689.1	2	20101205	9031	Gallus gallus isolate YP20051 breed Tengchongxue mitochondrion
GU261688.1	2	20101205	9031	Gallus gallus isolate YP20069 breed Tengchongxue mitochondrion
GU261705.1	2	20101205	9031	Gallus gallus isolate YP20081 breed Chigulu mitochondrion
GU261684.1	2	20101205	9031	Gallus gallus isolate YP20085 breed Chigulu mitochondrion
GU261719.1	2	20101205	9031	Gallus gallus isolate YP20092 breed Chigulu mitochondrion
GU261715.1	2	20101205	9031	Gallus gallus isolate YP20112 breed Chigulu mitochondrion
GU261717.1	2	20101205	9031	Gallus gallus isolate YP20123 breed Chigulu mitochondrion
GU261699.1	2	20101205	9031	Gallus gallus isolate YP20190 breed Wenshanshandi mitochondrion
GU261711.1	2	20101205	9031	Gallus gallus isolate YP20266 breed Nixi mitochondrion
GU261710.1	2	20101205	9031	Gallus gallus isolate YP20307 breed Nixi mitochondrion
GU261712.1	2	20101205	9031	Gallus gallus isolate YP20320 breed Lv'erwu mitochondrion
GU261682.1	2	20101205	9031	Gallus gallus isolate YP20463 breed Autochthonic chicken mitochondrion
GU261687.1	2	20101205	9031	Gallus gallus isolate YP20477 breed Autochthonic chicken mitochondrion
GU261686.1	2	20101205	9031	Gallus gallus isolate YP20488 breed Autochthonic chicken mitochondrion
GU261679.1	2	20101205	9031	Gallus gallus isolate YP20523 breed Autochthonic chicken mitochondrion
GU261694.1	2	20101205	9031	Gallus gallus isolate YP20648 breed Autochthonic chicken mitochondrion
GU261683.1	2	20101205	9031	Gallus gallus isolate YP20697 breed Tulufan mitochondrion
AY235570.1	3	20050416	9031	Gallus gallus mitochondrion
AP003323.1	2	20050729	208525	Gallus gallus bankiva mitochondrion
AP003322.1	2	20050729	208526	Gallus gallus gallus mitochondrion
GU261674.1	2	20101205	405000	Gallus gallus jabouillei isolate 1210-1 breed Red jungle fowl mitochondrion
GU261696.1	2	20101205	405000	Gallus gallus jabouillei isolate YP20736 breed Red jungle fowl mitochondrion
GU261709.1	2	20101205	400035	Gallus gallus murghi isolate ggm1 breed Red jungle fowl mitochondrion
GU261708.1	2	20101205	400035	Gallus gallus murghi isolate ggm4 breed Red jungle fowl mitochondrion
GU261707.1	2	20101205	400035	Gallus gallus murghi isolate ggm7 breed Red jungle fowl mitochondrion
AP003321.1	2	20050729	208524	Gallus gallus spadiceus mitochondrion
GU261690.1	2	20101205	208524	Gallus gallus spadiceus isolate DH40 breed Red jungle fowl mitochondrion
GU261693.1	2	20101205	208524	Gallus gallus spadiceus isolate DHZ1 breed Red jungle fowl mitochondrion
GU261692.1	2	20101205	208524	Gallus gallus spadiceus isolate DHZ2 breed Red jungle fowl mitochondrion
GU261695.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19289 breed Red jungle fowl mitochondrion
GU261706.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19297 breed Red jungle fowl mitochondrion
GU261704.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19902 breed Red jungle fowl mitochondrion
GU261716.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19903 breed Red jungle fowl mitochondrion
GU261703.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19906 breed Red jungle fowl mitochondrion
GU261702.1	2	20101205	208524	Gallus gallus spadiceus isolate YP19915 breed Red jungle fowl mitochondrion
AP003325.1	1	20050721	9032	Gallus lafayetii mitochondrion
AP006741.1	1	20050721	9033	Gallus sonneratii mitochondrion
AP003324.1	1	20050721	9034	Gallus varius mitochondrion
AB218884.1	1	20090610	43593	Gambelia wislizenii mitochondrion
AP004422.1	2	20050416	33528	Gambusia affinis mitochondrion
EU527333.1	1	20080904	420844	Gampsocleis gratiosa mitochondrion
EU647222.1	2	20101028	585898	Gandalfus yunohana mitochondrion
AP002944.1	2	20050416	69293	Gasterosteus aculeatus mitochondrion
AB445129.1	2	20090113	161456	Gasterosteus wheatlandi mitochondrion
EU513373.1	2	20090416	267434	Gastrimargus marmoratus mitochondrion
AY293618.1	4	20061114	37040	Gavia stellata mitochondrion
AB079596.1	4	20080924	94835	Gavialis gangeticus mitochondrion
AY456250.1	5	20081224	194526	Gegeneophis ramaswamii mitochondrion
FJ230961.1	1	20090424	130583	Geisha distinctissima mitochondrion
AY282753.1	6	20061114	36310	Gekko gecko mitochondrion
HM370130.1	1	20100621	36310	Gekko gecko LW1 mitochondrion
AP009500.1	1	20110111	89589	Genyomyrus donnyi mitochondrion
AY605476.1	2	20061114	261498	Geocalamus acutus mitochondrion
EU410488.1	2	20090115	8947	Geococcyx californianus mitochondrion
HM640212.1	1	20110302	8947	Geococcyx californianus mitochondrion
EU427336.1	1	20081224	300797	Geocoris pallidipennis mitochondrion
AY320032.1	6	20081118	36754	Geodia neptuni mitochondrion
AB187570.1	3	20071129	290333	Geothelphusa dehaani mitochondrion
HM640213.1	1	20110302	869458	Geotrygon violacea mitochondrion
AY954505.1	1	20090924	260995	Geotrypetes seraphini mitochondrion
HM125537.1	2	20110210	326026	Geranium palmatum plastid
FJ456944.1	1	20090618	575832	Gerris sp. NKMT033 mitochondrion
EF622512.1	2	20080301	948311	Gibberella intermedia mitochondrial plasmid pFP1
DQ364632.1	1	20070525	5518	Gibberella zeae mitochondrion
AB282852.1	1	20100218	242958	Gigantactis vanhoeffeni mitochondrion
AP009315.1	2	20110302	71752	Gila conspersa mitochondrion
DQ536424.1	2	20060719	71757	Gila robusta mitochondrion
FJ211845.1	1	20090701	8222	Gillichthys mirabilis mitochondrion
FJ211846.1	1	20090701	79683	Gillichthys seta mitochondrion
AP003424.1	1	20090224	9894	Giraffa camelopardalis mitochondrion
AP011060.1	1	20090822	163149	Girella punctata mitochondrion
HQ908425.1	1	20110209	38271	Glaucocystis nostochinearum strain UTEX 64 mitochondrion
AJ001562.1	6	20061114	41261	Glis glis mitochondrion
JF339976.1	1	20110318	38241	Globicephala macrorhynchus isolate Glomac65 mitochondrion
HM060333.1	2	20100708	38241	Globicephala macrorhynchus mitochondrion
JF339972.1	1	20110318	9731	Globicephala melas isolate GlomelG5 mitochondrion
HM060334.1	2	20100708	9731	Globicephala melas mitochondrion
FJ648425.1	2	20090618	4876	Glomus intraradices mitochondrion
HQ189519.1	1	20100923	588596	Glomus irregulare strain DAOM-197198 mitochondrion
AP004105.1	4	20061114	170196	Glossanodon semifasciatus mitochondrion
EU913477.1	1	20081019	259325	Gloydius blomhoffi brevicaudus mitochondrion
DQ317523.1	2	20061114	3847	Glycine max cultivar PI 437654 chloroplast
AP008928.2	3	20101229	42645	Gnathonemus petersii mitochondrion
AB218687.1	3	20090215	332172	Gnathopogon elongatus mitochondrion
AP009569.1	1	20090123	33153	Gnetum parvifolium chloroplast
AB239596.1	2	20090215	27704	Gobio gobio mitochondrion
FJ515919.1	1	20101231	581201	Gobiobotia brevibarba mitochondrion
FJ515918.1	1	20101231	564073	Gobiobotia macrocephala mitochondrion
AY191995.1	2	20050416	221270	Gomphiocephalus hodgsoni mitochondrion
GU294759.1	1	20100630	58560	Gomphocerippus rufus mitochondrion
GQ180102.1	1	20100202	647970	Gomphocerus licenti mitochondrion
DQ191682.1	1	20050921	85123	Gonodactylus chiragra mitochondrion
AP009402.1	1	20080620	189504	Gonorynchus abbreviatus mitochondrion
AB054134.1	5	20090215	149986	Gonorynchus greyi mitochondrion
D38114.1	14	20090703	9593	Gorilla gorilla mitochondrion
X93347.1	9	20090630	9595	Gorilla gorilla gorilla mitochondrion
AP009123.1	2	20061226	3634	Gossypium barbadense chloroplast
DQ345959.1	3	20061114	3635	Gossypium hirsutum cultivar coker 310 FR chloroplast
GU907100.1	1	20110301	34273	Gossypium thurberi chloroplast
AY673996.1	3	20050416	285951	Gracilaria tenuistipitata var. liui chloroplast
HQ586059.1	1	20101205	42480	Gracilariophila oryzoides mitochondrion
HQ586060.1	1	20101205	408198	Gracilariopsis andersonii mitochondrion
EU557095.1	1	20090203	83653	Grampus griseus mitochondrion
HQ392511.1	1	20101213	192188	Grapholita molesta mitochondrion
AY484748.1	1	20040818	55752	Graptacme eborea mitochondrion
AP007277.1	1	20060224	299323	Grasseichthys gabonensis mitochondrion
FJ769848.1	1	20100301	9117	Grus americana mitochondrion
FJ769854.1	1	20100301	9116	Grus antigone mitochondrion
FJ769855.1	1	20100301	40820	Grus canadensis mitochondrion
FJ769843.1	1	20100301	9118	Grus carunculatus mitochondrion
FJ769849.1	1	20100301	40816	Grus grus mitochondrion
FJ769847.1	1	20100301	30415	Grus japonensis mitochondrion
FJ769846.1	1	20100301	40819	Grus leucogeranus mitochondrion
FJ769850.1	1	20100301	40818	Grus monacha mitochondrion
FJ769851.1	1	20100301	40817	Grus nigricollis mitochondrion
FJ769844.1	1	20100301	40825	Grus paradisea mitochondrion
FJ769853.1	1	20100301	34922	Grus rubicunda mitochondrion
FJ769852.1	1	20100301	9115	Grus vipio mitochondrion
FJ769845.1	1	20100301	9111	Grus virgo mitochondrion
AY660929.1	5	20061114	213494	Gryllotalpa orientalis mitochondrion
EU938371.1	1	20080930	552513	Gryllotalpa pluvialis mitochondrion
AF041468.1	4	20061114	55529	Guillardia theta chloroplast
AF165818.4	10	20081216	55529	Guillardia theta nucleomorph chromosome 1
AJ010592.2	10	20090630	55529	Guillardia theta nucleomorph chromosome 2
AF083031.2	11	20091027	55529	Guillardia theta nucleomorph chromosome 3
EU549769.1	2	20101028	4230	Guizotia abyssinica chloroplast
AM711901.1	2	20080320	48420	Gulo gulo mitochondrion
AP008930.1	2	20101229	42648	Gymnarchus niloticus mitochondrion
AB239595.1	2	20090215	75348	Gymnocypris przewalskii mitochondrion
AY525784.1	2	20070210	262098	Gymnogobius petschiliensis mitochondrion
GQ244471.1	1	20090922	449092	Gymnopis multiplicata mitochondrion
AP002976.1	4	20101229	139722	Gymnothorax kidako mitochondrion
AB242164.1	2	20090215	154816	Gyrinocheilus aymonieri mitochondrion
AP010884.1	1	20090127	565078	Gyrinomimus myersi mitochondrion
AP010883.1	1	20090127	565077	Gyrinomimus sp. UW 113191 mitochondrion
AY728230.1	2	20040922	134760	Gyrinophilus porphyriticus mitochondrion
EU293891.1	1	20080608	368976	Gyrodactylus derjavinoides mitochondrion
DQ988931.1	3	20070420	37629	Gyrodactylus salaris mitochondrion
EF527269.1	3	20070728	212345	Gyrodactylus thymalli mitochondrion
AY571145.1	2	20050416	130930	Habronattus oregonensis mitochondrion
AB075954.1	4	20061114	181088	Haemaphysalis flavamitochondrion
DQ029097.1	1	20050605	75445	Haematobia irritans irritans mitochondrion
AY074886.2	4	20050527	185689	Haematopus ater mitochondrion
EU346694.2	2	20080731	6289	Haemonchus contortus mitochondrion
FJ168562.1	2	20090402	77522	Haemoproteus columbae mitochondrion
AY733086.1	2	20050701	292793	Haemoproteus sp. jb1.JA27 mitochondrion
AY733087.1	2	20050701	292794	Haemoproteus sp. jb2.SEW5141 mitochondrion
AP006018.1	2	20081119	215378	Halichoeres melanurus mitochondrion
EU082205.1	1	20080831	217853	Halichoeres tenuispinis mitochondrion
EU087704.1	1	20080831	147232	Halichoeres trimaculatus mitochondrion
X72004.1	13	20050418	9711	Halichoerus grypus mitochondrion
AY588938.1	6	20090115	36100	Haliotis rubra mitochondrion
FJ599667.1	2	20100503	454124	Haliotis tuberculata tuberculata mitochondrion
EU237483.1	2	20080221	253172	Halisarca dujardini mitochondrion
HQ606142.1	1	20110102	936147	Halisarca sp. DVL-2010 mitochondrion
DQ917432.1	3	20070424	373956	Halocaridina rubra mitochondrion
AB024528.1	5	20060227	7729	Halocynthia roretzi mitochondrion
FJ685650.1	2	20100702	286706	Halyomorpha halys mitochondrion
DQ058142.1	2	20061114	29833	Hanseniaspora uvarum mitochondrion
HM754620.1	1	20100811	687869	Hapalogenys nigripinnis mitochondrion
AB282856.1	1	20100218	412653	Haplophryne mollis mitochondrion
AP002919.1	2	20050416	143314	Harpadon microchir mitochondrion
AY699271.1	3	20060227	287944	Harpiosquilla harpax mitochondrion
AY182005.1	5	20061114	109764	Harpochytrium sp. JEL94 mitochondrion
AY182006.1	5	20061114	224131	Harpochytrium sp. JEL105 mitochondrion
HM147140.1	2	20101021	765186	Harriotta raleighana mitochondrion
GU828005.1	2	20100526	5778	Hartmannella vermiformis mitochondrion
EF196664.1	1	20071101	9634	Helarctos malayanus mitochondrion
DQ383815.1	3	20070311	4232	Helianthus annuus cultivar line HA383 chloroplast
AP002948.1	2	20050416	143344	Helicolenus hilgendorfi mitochondrion
DQ398104.1	4	20081126	145475	Helicosporidium sp. ex Simulium jonesii plastid
GQ339576.1	1	20100213	145475	Helicosporidium sp. ex Simulium jonesi mitochondrion
GU188273.1	1	20101028	29058	Helicoverpa armigera mitochondrion
AB167711.1	2	20080924	8554	Heloderma suspectum mitochondrion
AB070241.1	2	20090215	80793	Hemibarbus barbus mitochondrion
DQ347953.2	4	20091219	328524	Hemibarbus labeo mitochondrion
DQ347952.2	4	20091219	354114	Hemibarbus longirostris mitochondrion
DQ345787.2	4	20091219	351240	Hemibarbus mylodon mitochondrion
AY728231.1	2	20040922	291265	Hemidactylium scutatum mitochondrion
GQ245970.2	2	20110210	47729	Hemidactylus frenatus mitochondrion
AB099481.1	3	20050414	217708	Hemiechinus auritus mitochondrion
EU725864.1	1	20090917	262124	Hemiphaga novaeseelandiae mitochondrion
EU651892.1	3	20080515	464988	Hemiselmis andersenii strain CCMP 644 mitochondrion
FJ207523.1	1	20090428	330465	Hemitragus jayakari mitochondrion
FJ207531.1	1	20090428	37179	Hemitragus jemlahicus mitochondrion
AP006005.1	1	20070920	215362	Heniochus diphreutes mitochondrion
FJ168565.1	2	20090402	587286	Hepatocystis sp. ex Pteropus hypomelanus mitochondrion
AY309258.1	5	20050416	216259	Heptathela hangzhouensis mitochondrion
FN296153.1	2	20091125	7733	Herdmania momus mitochondrion
AY873843.1	2	20050417	140016	Herpestes javanicus mitochondrion
AP009582.1	1	20091130	492042	Herwigia kreffti mitochondrion
HQ689652.1	1	20110131	10181	Heterocephalus glaber mitochondrion
AP010859.1	2	20101229	391206	Heteroconger hassi mitochondrion
AJ310141.1	3	20061114	7792	Heterodontus francisci mitochondrion
AF270939.1	5	20061114	145266	Heterodoxus macropus mitochondrion
EF626816.1	1	20071227	13085	Heteronotia binoei mitochondrion
AB477468.1	2	20110114	173795	Heteropteryx dilatata mitochondrion
EF043402.1	1	20061021	37862	Heterorhabditis bacteriophora strain HP88 mitochondrion
EU168190.1	2	20090327	2829	Heterosigma akashiwo strain NIES 293 chloroplast
EU168191.1	3	20090327	2829	Heterosigma akashiwo chloroplast
GQ222227.1	2	20101105	2829	Heterosigma akashiwo mitochondrion
AP009498.1	1	20110111	91721	Heterotis niloticus mitochondrion
EF368011.1	1	20070127	387665	Hexamermis agrotis mitochondrion
DQ632742.1	1	20061004	120431	Hiatella arctica mitochondrion
AB282839.1	1	20100218	412656	Himantolophus albinares mitochondrion
AB282840.1	1	20100218	412657	Himantolophus groenlandicus mitochondrion
AP004356.2	4	20101229	54904	Hiodon alosoides mitochondrion
AP009499.1	1	20110111	466964	Hiodon tergisus mitochondrion
GQ868707.1	1	20100928	596577	Hipparchia autonoe mitochondrion
AP005985.1	2	20080116	103715	Hippocampus kuda mitochondrion
AM749122.1	1	20070723	8267	Hippoglossus hippoglossus mitochondrion
AM749126.1	1	20070723	195615	Hippoglossus stenolepis mitochondrion
AJ010957.1	3	20050415	9833	Hippopotamus amphibius mitochondrion
AP009613.1	1	20110111	112149	Hippopotamyrus wilverthi mitochondrion
EU237484.1	2	20080221	479639	Hippospongia lachne mitochondrion
FN562582.1	2	20100602	72674	Holothuria forskali mitochondrion
AY875213.1	4	20070801	197043	Homalodisca vitripennis mitochondrion
AB242165.1	4	20091104	357284	Homaloptera leonardi mitochondrion
J01415.2	52	20080718	9606	Homo sapiens mitochondrion isolate HeLa
X93334.1	10	20050418	9606	Homo sapiens mitochondrion
AM948965.1	2	20080820	63221	Homo sapiens neanderthalensis mitochondrion
FN673705.1	2	20100527	741158	Homo sp. Altai mitochondrion
FR695060.1	2	20110210	741158	Homo sp. Altai mitochondrion, isolate Denisova molar
AP011543.1	2	20101102	103373	Hoplobatrachus tigerinus mitochondrion
AP002938.1	2	20050416	143337	Hoplostethus japonicus mitochondrion
AP010865.1	2	20101229	556244	Hoplunnis punctata mitochondrion
EF115541.1	1	20061208	112509	Hordeum vulgare subsp. vulgare cultivar Morex chloroplast
AY660566.1	8	20061114	37429	Huperzia lucidula chloroplast
AY442351.1	3	20050416	61971	Huso huso mitochondrion
AY456189.1	4	20061114	84335	Hutchinsoniella macracantha mitochondrion
AF402142.1	5	20061114	82268	Hyaloraphidium curvatum mitochondrion
EU427337.1	1	20081224	498947	Hydaropsis longirostris mitochondrion
DQ991932.1	1	20110119	259632	Hydatina physis mitochondrion
EU237491.1	2	20100609	6088	Hydra oligactis mitochondrion
BN001179.1	2	20100623	6087	Hydra vulgaris mitochondriall chromosome 1
BN001180.1	2	20100623	6087	Hydra vulgaris mitochondriall chromosome 2
HM147139.1	2	20101021	334987	Hydrolagus lemures mitochondrion
AY728234.1	2	20040922	57553	Hydromantes brunus mitochondrion
FJ456945.1	1	20090618	575833	Hydrometra sp. NKMT020 mitochondrion
EU315254.1	1	20081230	9883	Hydropotes inermis mitochondrion
AB475096.1	1	20100601	588074	Hydrosaurus amboinensis mitochondrion
AM493667.2	1	20090303	426698	Hydroscapha granulum mitochondrion
AM181026.1	3	20070821	29086	Hydrurga leptonyx mitochondrion
AY458593.1	2	20050708	167933	Hyla chinensis mitochondrion
AB303949.1	3	20080109	109175	Hyla japonica mitochondrion
AB504748.1	1	20100407	9579	Hylobates agilis mitochondrion
X99256.1	6	20050418	9580	Hylobates lar mitochondrion
AB504749.1	1	20100407	9589	Hylobates pileatus mitochondrion
AM905042.1	2	20080818	48897	Hylomys suillus mitochondrion
AF314223.1	4	20061114	6216	Hymenolepis diminuta mitochondrion
DQ333808.1	1	20060511	244216	Hynobius amjiensis mitochondrion
EF462213.1	2	20070406	391643	Hynobius arisanensis mitochondrion
DQ333819.1	1	20060511	288313	Hynobius chinensis mitochondrion
DQ333816.1	1	20060511	284022	Hynobius formosanus mitochondrion
GU384690.1	1	20100127	412855	Hynobius guabangshanensis mitochondrion
DQ333811.1	1	20060511	113391	Hynobius leechii mitochondrion
EF201847.1	1	20080101	113393	Hynobius quelpaertensis mitochondrion
FJ594965.1	2	20100225	586894	Hynobius yangi mitochondrion
AB242169.1	2	20090215	61316	Hypentelium nigricans mitochondrion
AP006037.1	1	20090822	171196	Hyperoglyphe japonica mitochondrion
AJ554056.1	4	20061114	48744	Hyperoodon ampullatus mitochondrion
AP011572.1	1	20110111	91725	Hyperopisus bebe mitochondrial DNA
GU592049.1	1	20100407	39466	Hyphantria cunea mitochondrion
AP004420.1	2	20050416	126353	Hypoatherina tsurugae mitochondrion
EU523753.1	1	20080401	139869	Hypochilus thorelli mitochondrion
AF447590.1	5	20060831	51453	Hypocrea jecorina mitochondrion
AF163325.2	4	20031004	5544	Hypocrea lixii mitochondrial plasmid pThr1
GU584123.1	2	20100907	7389	Hypoderma lineatum mitochondrion
GQ244472.1	1	20090922	8450	Hypogeophis rostratus mitochondrion
HM106489.1	1	20110310	182223	Hypomesus nipponensis mitochondrion
EU315941.1	1	20071212	13095	Hypophthalmichthys molitrix mitochondrion
EU343733.1	1	20071225	7965	Hypophthalmichthys nobilis mitochondrion
FJ848375.1	1	20091231	184434	Hypoplectrus gemma mitochondrion
AP004437.1	2	20050416	166256	Hypoptychus dybowskii mitochondrion
AB370892.1	1	20080827	293917	Hyporhamphus sajori mitochondrion
AP009506.1	3	20091127	172532	Hypselecara temporalis mitochondrion
FR749884.1	1	20101223	232323	Hypsibius dujardini mitochondrion
EU728593.1	3	20100421	509065	Hypsiglena chlorophaea chlorophaea mitochondrion
EU728587.1	3	20100421	427717	Hypsiglena chlorophaea deserticola mitochondrion
EU728592.1	3	20100421	509071	Hypsiglena jani texana mitochondrion
EU728582.1	3	20100421	509074	Hypsiglena ochrorhyncha klauberi voucher CAS 229918 mitochondrion
EU728589.1	3	20100421	509074	Hypsiglena ochrorhyncha klauberi mitochondrion
EU728581.1	3	20100421	427719	Hypsiglena ochrorhyncha nuchalata mitochondrion
EU728578.1	3	20100421	509076	Hypsiglena ochrorhyncha ochrorhyncha mitochondrion
EU728584.1	3	20100421	509078	Hypsiglena slevini mitochondrion
EU728580.1	3	20100421	533186	Hypsiglena sp. DGM2008 mitochondrion
EU728591.1	3	20100421	46305	Hypsiglena torquata mitochondrion
FJ529186.1	1	20081224	165450	Hyriopsis cumingii mitochondrion
HQ641406.1	1	20110131	319528	Hyriopsis schlegelii sex female mitochondrion
HQ641407.1	1	20110131	319528	Hyriopsis schlegelii sex male mitochondrion
AY458594.1	2	20050708	8453	Ichthyophis bannanicus mitochondrion
AY456251.1	3	20081216	194415	Ichthyophis glutinosus mitochondrion
AF482987.1	3	20050415	7998	Ictalurus punctatus mitochondrion
AP009316.1	3	20110302	7973	Ictiobus bubalus mitochondrion
EU237485.1	2	20080221	479643	Igernella notabilis mitochondrion
AJ278511.2	8	20061114	8517	Iguana iguana mitochondrion
AP002917.1	2	20050416	143307	Ijimaia dofleini mitochondrion
AP009140.1	1	20070612	373249	Ilisha africana mitochondrion
AP009141.1	1	20070612	365054	Ilisha elongata mitochondrion
EF380354.1	1	20070624	145286	Illicium oligandrum chloroplast
DQ238598.1	3	20060701	34582	Ilyanassa obsoleta mitochondrion
FJ456947.1	1	20090618	280203	Ilyocoris cimicoides mitochondrion
AP010848.1	2	20101229	391182	Ilyophis brunneus mitochondrion
EU728586.1	3	20100421	121343	Imantodes cenchoa mitochondrion
AP004438.1	2	20050416	181450	Indostomus paradoxus mitochondrion
DQ080043.1	2	20060210	74920	Indotestudo elongata mitochondrion
DQ080044.1	2	20060210	260613	Indotestudo forstenii voucher MVZ 234627 mitochondrion
AJ554059.1	4	20061114	9725	Inia geoffrensis mitochondrion
EU237486.1	2	20080221	283497	Iotrochota birotulata mitochondrion
EU118126.1	3	20080207	4121	Ipomoea purpurea chloroplast
GQ337013.1	2	20100220	467775	Ircinia strobilina mitochondrion
AB239601.1	2	20090215	180933	Ischikauia steenackeri mitochondrion
AP011573.1	1	20110111	112151	Isichthys henryi mitochondrial DNA
AB373006.1	1	20080827	492020	Iso hawaiiensis mitochondrion
GU191333.1	2	20101216	49763	Isoetes flaccida chloroplast
AF358864.1	4	20050527	37698	Isoodon macrourus mitochondrion
AB470306.1	1	20090508	13575	Istiophorus platypterus mitochondrion
AP011574.1	1	20110111	91714	Ivindomyrus marchei mitochondrial DNA
HQ690247.1	1	20110131	188380	Ixobrychus cinnamomeus mitochondrion
AF081828.1	2	20050415	34612	Ixodes hexagonus mitochondrion
AB075955.1	5	20061114	65647	Ixodes holocyclusmitochondrion
AB073725.1	4	20061114	34615	Ixodes persulcatusmitochondrion
AB087746.1	3	20061114	59655	Ixodes uriae mitochondrion
AJ416890.1	3	20061114	51337	Jaculus jaculus
AY771989.1	1	20050716	296598	Japyx solifugus mitochondrion
DQ673255.1	5	20070615	126431	Jasminum nudiflorum chloroplast
FJ695500.1	2	20110120	180498	Jatropha curcas chloroplast
AP006230.1	3	20050826	221866	Jenkinsia lamprotaenia mitochondrion
AP009496.1	1	20110111	466963	Jenkinsia sp. CL54 mitochondrion
AY458595.1	2	20050708	167934	Kaloula pulchra mitochondrion
U09810.1	8	20100522	34587	Katharina tunicata mitochondrion
AB101290.1	2	20050414	8226	Katsuwonus pelamis mitochondrion
AP010845.1	2	20101229	139721	Kaupichthys hyoproroides mitochondrion
AP009175.1	2	20070920	384597	Kentrocapros aculeatus mitochondrion
EF622534.1	4	20090224	444732	Keratoisidinae sp. BAL208-1 mitochondrion
AP010820.1	2	20090204	3324	Keteleeria davidiana chloroplast
FJ915117.1	1	20100930	641010	Kinosternon leucostomum mitochondrion
EF222188.1	3	20090326	414978	Kinyongia fischeri mitochondrion
AY654900.1	3	20061114	28985	Kluyveromyces lactis mitochondrion
AJ554055.1	4	20061114	27615	Kogia breviceps mitochondrion
AF283503.1	2	20050415	37003	Kryptolebias marmoratus mitochondrion
GU591328.1	1	20100609	160619	Kryptoperidinium foliaceum chloroplast
AP011065.1	1	20090822	163137	Kuhlia mugil mitochondrion
AP011061.1	1	20090822	163144	Kyphosus cinerascens mitochondrion
AP011198.1	2	20110304	295399	Labeo bata mitochondrion
AB238967.1	2	20090215	352451	Labeo batesii mitochondrion
AB238968.1	2	20090215	198507	Labeo senegalensis mitochondrion
AP010856.1	2	20101229	556242	Labichthys carinatus mitochondrion
AP009125.1	3	20081119	270574	Labracinus cyclophthalmus mitochondrion
AP011062.1	1	20090822	163139	Labracoglossa argentiventris mitochondrion
FJ456948.1	1	20090618	575834	Laccotrephes robustus mitochondrion
AM176577.1	5	20081023	340657	Lacerta viridis viridis mitochondrion
AJ634268.1	4	20061114	381046	Lachancea thermotolerans mitochondrion
AP009187.1	1	20081001	319757	Lactoria diaphana mitochondrion
AP007232.1	3	20060516	4236	Lactuca sativa chloroplast
DQ383816.1	3	20061114	4236	Lactuca sativa cultivar Salinas chloroplast
AJ554061.1	4	20061114	27610	Lagenorhynchus albirostris mitochondrion
GQ461750.1	1	20091006	204814	Lagocephalus lunaris mitochondrion
AP009538.1	2	20090227	204818	Lagocephalus wheeleri mitochondrion
AM262148.1	2	20061114	65634	Lagostrophus fasciatus mitochondrion
AP003426.1	1	20090224	9844	Lama glama mitochondrion
EU681954.1	2	20100909	9840	Lama guanicoe mitochondrion
Y19184.1	3	20061114	30538	Lama pacos mitochondrion
AJ344328.1	3	20061114	80365	Laminaria digitata mitochondrion
EU554423.1	2	20080529	515320	Lamium leaf distortion associated virus
Y18683.1	3	20050418	7748	Lampetra fluviatilis mitochondrion
AP002924.1	2	20050416	81370	Lampris guttatus mitochondrion
AP004410.1	3	20050416	228346	Lamprogrammus niger mitochondrion
AY365193.1	3	20061027	81578	Lampsilis ornata mitochondrion
FJ360695.1	1	20091224	195883	Laodelphax striatellus mitochondrion
AB035869.1	2	20050414	93892	Laqueus rubellus mitochondrion
EU339149.1	3	20090204	215358	Larimichthys crocea mitochondrion
FJ618559.1	1	20100120	334908	Larimichthys polyactis mitochondrion
AY293619.1	3	20061121	37036	Larus dominicanus mitochondrion
DQ010541.1	2	20060311	8187	Lates calcarifer mitochondrion
HM029371.1	2	20101207	3860	Lathyrus sativus chloroplast
U82228.1	8	20050418	7897	Latimeria chalumnae mitochondrion
AP006858.2	4	20110119	106881	Latimeria menadoensis mitochondrion
AB054126.1	6	20091028	149982	Lefua echigonia mitochondrion
EU305668.1	1	20101104	81936	Leggadina lakedownensis mitochondrion
GU596454.1	2	20101205	175787	Leiocassis longirostris mitochondrion
AB266739.1	1	20090610	211984	Leiocephalus personatus mitochondrion
AB476400.1	1	20100601	181671	Leiolepis guttata mitochondrion
HM142901.1	1	20101028	118230	Leiopelma archeyi mitochondrion
HQ690245.1	1	20110131	201335	Leiothrix argentauris mitochondrion
FR798995.1	1	20110204	420245	Leishmania braziliensis MHOM/BR/75/M2904 contig, possible fusion of chromosomes 20 and 34
AF308683.1	1	20010103	5671	Leishmania infantum kinetoplast minicircle DNA
M10126.1	17	20061114	5689	Leishmania tarentolae mitochondrion
DQ400350.1	3	20080713	4472	Lemna minor chloroplast
AJ421451.1	5	20061114	9447	Lemur catta mitochondrion mitochondrion
AY625897.1	2	20050819	72036	Lepeophtheirus salmonis mitochondrion
AP009374.1	1	20070414	59292	Lepidium virginicum chloroplast
AM258984.1	1	20081031	27788	Lepidochelys olivacea mitochondrion
AB162908.1	2	20080924	264485	Lepidophyma flavimaculatum mitochondrion
AF335994.2	8	20061114	159971	Lepidopsocidae sp. RS-2001 mitochondrion,
AF302934.1	3	20050415	7883	Lepidosiren paradoxa mitochondrion
HM070254.1	1	20100816	756882	Lepilemur hubbardorum mitochondrion
AB042861.1	6	20101229	7918	Lepisosteus oculatus mitochondrion
DQ536423.1	2	20060719	34771	Lepisosteus osseus mitochondrion
AB242170.1	2	20090215	357286	Leptobotia mantschurica mitochondrion
AP010868.1	2	20101229	556254	Leptocephalus sp. 'type II larva' (Smith, 1989) mitochondrion
AP009403.1	1	20080620	443636	Leptochilichthys agassizii mitochondrion
EU728590.1	3	20100421	427731	Leptodeira septentrionalis polysticta mitochondrion
AP009583.1	1	20091130	492044	Leptoderma lubricum mitochondrion
AP009584.1	1	20091130	492045	Leptoderma retropinna mitochondrion
AP011500.1	2	20110112	645280	Leptoderma sp. LERE mitochondrion
AM181025.1	4	20070821	9713	Leptonychotes weddellii mitochondrion
AY562383.1	3	20050629	60532	Leptorhynchoides thecatus mitochondrion
EF506945.1	2	20070718	34116	Leptosira terrestris UTEX 333 chloroplast
HM640214.1	1	20110302	135631	Leptotila verreauxi mitochondrion
AB194045.1	2	20061114	299468	Leptotrombidium akamushi mitochondrion
AB194044.1	3	20061227	299467	Leptotrombidium deliense mitochondrion
AB180098.1	5	20061114	279272	Leptotrombidium pallidum mitochondrion
AJ421471.1	5	20061114	9983	Lepus europaeus mitochondrion
AB565771.1	2	20100907	7753	Lethenteron reissneri mitochondrion
AP009165.1	2	20070920	182659	Lethrinus obsoletus mitochondrion
AB302215.1	2	20080807	211597	Leucocytozoon caulleryi mitochondrion
FJ168564.1	2	20090402	587282	Leucocytozoon fringillinarum mitochondrion
FJ168563.1	2	20090402	379413	Leucocytozoon majoris mitochondrion
AB299369.1	1	20070414	434249	Leucocytozoon sabrazesi mitochondrion
DQ442914.1	3	20060929	96856	Ligia oceanica mitochondrion
AY899242.1	4	20091008	613120	Limnonectes bannaensis mitochondrion
AY974191.1	3	20061114	120496	Limnonectes fujianensis mitochondrion
AF216203.1	2	20050415	6850	Limulus polyphemus mitochondrion
FJ839919.1	2	20090819	56195	Lineus viridis mitochondrion
DQ321752.1	2	20070604	329969	Liobagrus obesus mitochondrion
AP004101.1	5	20061114	170193	Lipolagus ochotensis mitochondrion
AY789529.1	2	20061114	118797	Lipotes vexillifer mitochondrion
DQ899947.1	2	20061114	3415	Liriodendron tulipifera chloroplast
GU327644.1	2	20110317	198433	Liriomyza trifolii mitochondrion
EF050073.1	1	20081101	55542	Lissemys punctata mitochondrion
AF309492.1	2	20050415	7552	Lithobius forficatus mitochondrion
EU517503.1	1	20090204	29019	Litopenaeus stylirostris mitochondrion
EF584003.1	3	20081011	6689	Litopenaeus vannamei mitochondrion
DQ333810.1	1	20060511	156992	Liua shihi mitochondrion
DQ333813.1	1	20060511	245147	Liua tsinpaensis mitochondrion
AM181024.1	4	20070821	101849	Lobodon carcinophaga mitochondrion
AP009375.1	1	20070414	226051	Lobularia maritima chloroplast
X80245.1	8	20061114	7004	Locusta migratoria mitochondrion
GU344101.1	1	20101231	229990	Locusta migratoria manilensis mitochondrion
EU287446.1	1	20080630	238695	Locusta migratoria migratoria mitochondrion
AB029616.1	6	20080311	6617	Loligo bleekeri mitochondrion
GQ225110.1	1	20090618	31211	Loligo opalescens mitochondrion
AM777385.2	3	20080929	4522	Lolium perenne complete chloroplast
FR821799.1	1	20110215	174260	Lophelia pertusa mitochondrion, isolate NL-1
AB282826.1	1	20100218	314249	Lophiodes caulinaris mitochondrion
DQ284754.1	2	20060804	356379	Lophiotoma cerithiformis mitochondrion
AP004414.1	4	20101130	8073	Lophius americanus mitochondrion
GQ871234.1	1	20100322	228248	Lophophorus lhuysii mitochondrion
FJ752432.1	4	20100615	228249	Lophophorus sclateri mitochondrion
AB164627.1	1	20080401	9044	Lophura ignita mitochondrion
EU417810.1	2	20091009	9046	Lophura nycthemera mitochondrion
EF043341.1	1	20091001	406538	Loripes lacteus mitochondrion
AB371094.1	1	20090603	9468	Loris tardigradus mitochondrion
AP004412.1	2	20050416	69944	Lota lota mitochondrion
DQ238599.1	2	20060701	225159	Lottia digitalis mitochondrion
AP002983.1	7	20080108	34305	Lotus japonicus chloroplast
AB264799.1	3	20090318	393181	Loxocorone allax mitochondrion
AJ224821.1	8	20061114	9785	Loxodonta africana mitochondrion
AB264800.1	2	20080510	393182	Loxosomella aloxiata mitochondrion
GU385217.1	2	20100319	289074	Lubomirskia baicalensis mitochondrion
FJ613419.1	2	20091120	590157	Lucanus mazama mitochondrion
AJ422212.1	2	20070830	13632	Lucilia sericata  mitochondrion
EF043342.1	1	20091001	406540	Lucinella divaricata mitochondrion
AB183558.1	3	20050819	60585	Luidia quinalia mitochondrion
U24570.1	4	20050417	6398	Lumbricus terrestris mitochondrion
HQ690246.1	1	20110131	229100	Luscinia calliope mitochondrion
FJ171339.1	1	20080917	520515	Lutjanus bengalensis mitochondrion
GQ265897.1	1	20090927	211835	Lutjanus erythropterus mitochondrion
FJ416614.1	1	20081110	396787	Lutjanus kasmira mitochondrion
FJ824741.1	1	20090531	218797	Lutjanus malabaricus mitochondrion
AP006000.1	1	20070920	215356	Lutjanus rivulatus mitochondrion
EF514208.1	1	20070406	232193	Lutjanus russellii mitochondrion
FJ824742.1	1	20090531	232192	Lutjanus sebae mitochondrion
FJ236015.1	1	20081015	9657	Lutra lutra mitochondrion
AP009161.1	2	20070920	75026	Luvarus imperialis mitochondrion
AP011563.1	1	20100627	458582	Lycengraulis grossidens mitochondrion
AF154053.1	5	20050415	297010	Lyciasalamandra atifi mitochondrion
AP004448.1	2	20050416	181467	Lycodes toyamensis mitochondrion
FJ456942.1	1	20090618	130591	Lycorma delicatula mitochondrion
AP011562.1	1	20100627	686571	Lycothrissa crocodilus mitochondrion
FJ617240.1	2	20090813	13123	Lymantria dispar mitochondrion
GQ979707.3	3	20100826	61384	Lynx rufus mitochondrion
DQ191683.1	1	20050921	344752	Lysiosquillina maculata mitochondrion
FJ906803.1	1	20090504	9541	Macaca fascicularis mitochondrion
AY612638.1	3	20050416	9544	Macaca mulatta mitochondrion
AJ309865.1	4	20061114	9546	Macaca sylvanus mitochondrion
EU294187.1	2	20081229	54602	Macaca thibetana mitochondrion
FJ797435.1	1	20090316	82204	Macrobrachium lanchesteri mitochondrion
HQ830201.1	1	20110117	159736	Macrobrachium nipponense mitochondrion
AY659990.1	3	20060216	79674	Macrobrachium rosenbergii mitochondrion
EF071948.1	1	20070327	571338	Macrochelys temminckii mitochondrion
FJ859901.1	3	20091027	528226	Macrogyrus oblongus mitochondrion
Y10524.1	10	20061114	9319	Macropus robustus mitochondrion
AP009171.1	2	20070920	384593	Macrorhamphosodes uradoi mitochondrion
AJ421452.1	4	20061114	29082	Macroscelides proboscideus mitochondrion
EU427338.1	1	20081224	498949	Macroscytus subaeneus mitochondrion
AJ639871.1	3	20061114	92651	Macrotis lagotis mitochondrion (partial)
EU400212.1	1	20080824	123771	Madracis mirabilis mitochondrion
AB470305.1	1	20090508	13603	Makaira indica mitochondrion
AB470304.1	1	20090508	384371	Makaira mazara mitochondrion
DQ080042.1	2	20060211	286009	Malacochersus tornieri voucher MVZ 234632 mitochondrion
AF295546.1	6	20061114	136089	Malawimonas jakobiformis mitochondrion
EU427339.1	1	20081224	498929	Malcus inconspicuus mitochondrion
HM106491.1	1	20110310	30960	Mallotus villosus mitochondrion
EF632344.1	2	20070920	39053	Mammut americanum mitochondrion
DQ188829.2	6	20061115	37349	Mammuthus primigenius mitochondrion
EU286785.1	1	20080115	7130	Manduca sexta mitochondrion
EU117376.1	1	20080311	3983	Manihot esculenta chloroplast
AJ421454.1	5	20061114	73815	Manis tetradactyla mitochondrion
DQ080040.1	3	20060316	260614	Manouria emys voucher MVZ 238129 mitochondrion
EF661586.1	2	20090107	74924	Manouria impressa mitochondrion
AB212225.1	4	20061114	111290	Mantella madagascariensis mitochondrion
M68929.1	36	20061114	3197	Marchantia polymorpha mitochondrion
X04465.1	87	20081023	3197	Marchantia polymorpha chloroplast
AP011575.1	1	20110111	42650	Marcusenius senegalensis mitochondrion
AP006346.1	2	20050519	27405	Marsupenaeus japonicus mitochondrion
FJ719367.1	1	20090303	74864	Martes flavigula mitochondrion
GU121228.1	2	20101119	76720	Martes pennanti haplotype schw1 mitochondrion
GU121229.1	2	20101119	76720	Martes pennanti haplotype schw4 mitochondrion
GU121230.1	2	20101119	76720	Martes pennanti haplotype schw7 mitochondrion
GU121231.1	2	20101119	76720	Martes pennanti haplotype schw9 mitochondrion
GU121232.1	2	20101119	76720	Martes pennanti haplotype schw11 Canada: British Columbia mitochondrion
GU121233.1	2	20101119	76720	Martes pennanti haplotype schw14 USA: Idaho mitochondrion
GU121234.1	2	20101119	76720	Martes pennanti haplotype schw17 USA: Minnesota mitochondrion
GU121235.1	2	20101119	76720	Martes pennanti haplotype schw18 USA: Minnesota mitochondrion
GU121236.1	2	20101119	76720	Martes pennanti haplotype schw19 USA: Wisconsin mitochondrion
GU121237.1	2	20101119	76720	Martes pennanti haplotype schw28 mitochondrion
FJ429093.1	1	20081112	36722	Martes zibellina mitochondrion
AP002946.1	2	20050416	143340	Mastacembelus favus mitochondrion
EU520643.1	2	20080312	58767	Mastigoproctus giganteus mitochondrion
AP006239.1	3	20060325	223211	Masturus lanceolatus mitochondrion
AP009404.1	1	20080620	443640	Maulisia mauli mitochondrion
HM132059.1	1	20110131	260622	Mauremys megalocephala mitochondrion
DQ453753.1	2	20081216	74926	Mauremys mutica mitochondrion
GQ387648.1	3	20090925	39758	Mayetiola destructor mitochondrion
GQ888722.1	1	20100213	237660	Mecistocirrus digitatus mitochondrion
EF551000.1	1	20080508	184780	Mecistops cataphractus mitochondrion
AC093544.8	9	20030312	3880	Medicago truncatula chloroplast
AB167539.1	2	20061114	266495	Megabalanus volcano mitochondrion
AB477471.1	2	20110114	590997	Megacrania alpheus adan mitochondrion
FJ597983.1	8	20091210	93213	Megaleranthis saniculifolia chloroplast
EU434747.1	3	20080227	75352	Megalobrama amblycephala mitochondrion
AP004808.1	4	20101229	7932	Megalops atlanticus mitochondrion
AB051110.1	4	20101229	118141	Megalops cyprinoides mitochondrion
AP006467.1	2	20050416	9773	Megaptera novaeangliae mitochondrion
HM583653.1	1	20100827	868576	Mekongiana xiangchengensis mitochondrion
HM583654.1	1	20100827	868578	Mekongiella xizangensis mitochondrion
AB282838.1	1	20100218	412655	Melanocetus johnsoni mitochondrion
AP004418.1	2	20050416	181425	Melanocetus murrayi mitochondrion
DQ020497.1	2	20061025	8056	Melanogrammus aeglefinus mitochondrion
AP004419.1	2	20050416	120839	Melanotaenia lacustris mitochondrion
JF275060.1	1	20110220	9103	Meleagris gallopavo strain Nicholas mitochondrion
EF153719.1	4	20110128	9103	Meleagris gallopavo mitochondrion
AM711900.1	3	20080403	9662	Meles meles mitochondrion
AP009207.1	1	20090110	392900	Melichthys vidua mitochondrion
EF450826.1	1	20070321	13146	Melopsittacus undulatus mitochondrion
EF196662.1	1	20071101	9636	Melursus ursinus mitochondrion
AB370893.1	1	20080827	238744	Menidia menidia mitochondrion
AY542313.1	3	20061121	47692	Menura novaehollandiae mitochondrion
GQ903339.1	1	20101214	74491	Meretrix lusoria mitochondrion
GQ463598.1	1	20090827	291251	Meretrix meretrix mitochondrion
EU145977.1	2	20090810	311198	Meretrix petechialis mitochondrion
DQ020496.1	3	20061025	8058	Merlangius merlangus mitochondrion
FR751402.1	1	20110110	8063	Merluccius merluccius mitochondrion, isolate Mm1
AJ716204.2	11	20070525	123226	Mesobuthus gibbosus mitochondrion
DQ340065.1	1	20070813	34649	Mesobuthus martensii mitochondrion
EU660218.1	1	20091001	10036	Mesocricetus auratus mitochondrion
AF166114.1	4	20061114	41882	Mesostigma viride chloroplast
AF353999.1	5	20061114	41882	Mesostigma viride mitochondrion
AJ639866.1	3	20061114	42725	Metachirus nudicaudatus mitochondrion (partial)
AM944817.1	4	20090902	510302	Metacrangonyx longipes mitochondrion
EF624055.1	2	20091201	444703	Metaperipatus inae mitochondrion
AY884128.1	2	20061114	5530	Metarhizium anisopliae strain ME1 mitochondrion
EF221760.1	1	20070311	34638	Metaseiulus occidentalis mitochondrion
GQ888714.1	1	20100213	55275	Metastrongylus pudendotectus mitochondrion
GQ888715.1	1	20100213	55276	Metastrongylus salmi mitochondrion
AF000023.1	3	20051006	6116	Metridium senile mitochondrion
AP009218.1	1	20090110	392920	Meuschenia hippocrepis mitochondrion
AB477466.1	2	20110114	590994	Micadina phluctainoides mitochondrion
DQ780881.1	4	20061220	56335	Micrastur gilvicollis mitochondrion
GQ244473.1	1	20090922	650642	Microcaecilia sp. PZ-2009 mitochondrion
AP006009.1	1	20090826	163146	Microcanthus strigatus mitochondrion
AM292321.1	3	20100114	341086	Microcosmus sulcatus mitochondrion
DQ412044.1	1	20070227	116890	Microcotyle sebastis mitochondrion
AY458596.1	2	20050708	143525	Microhyla heymonsi mitochondrion
AB303950.1	3	20080109	387933	Microhyla okinavensis mitochondrion
DQ512876.1	1	20070501	143526	Microhyla ornata mitochondrion
DQ991933.1	1	20110119	340426	Micromelo undata mitochondrion
FR751401.1	1	20110110	81636	Micromesistius poutassou mitochondrion, isolate Mp1
FJ858269.1	1	20090409	564608	Micromonas pusilla CCMP1545 chloroplast
FJ858267.1	1	20090413	296587	Micromonas sp. RCC299 chloroplast
FJ859351.1	1	20090413	296587	Micromonas sp. RCC299 mitochondrion
AP005986.1	2	20080116	161466	Microphis brachyurus mitochondrion
FJ515920.1	1	20101231	581202	Microphysogobio koreensis mitochondrion
AB378749.1	2	20100826	147949	Micropterus dolomieu mitochondrion
HQ391897.1	1	20101031	225391	Micropterus floridanus mitochondrion
DQ536425.1	2	20060719	27706	Micropterus salmoides mitochondrion
HQ391896.1	1	20101031	489037	Micropterus salmoides salmoides mitochondrion
JF261175.1	1	20110313	311220	Microtus fortis calamorum mitochondrion
JF261174.1	1	20110313	311338	Microtus fortis fortis mitochondrion
AF348082.1	4	20050603	100899	Microtus kikuchii mitochondrion
DQ015676.1	4	20081028	537919	Microtus levis mitochondrion
GU045453.1	1	20091102	8637	Micrurus fulvius mitochondrion
HM447240.1	1	20100708	240162	Miichthys miiuy mitochondrion
FN356025.1	2	20090924	4920	Millerozyma farinosa mitochondrion
FJ415225.1	2	20090531	106276	Mimachlamys nobilis mitochondrion
DQ536432.1	2	20060719	154819	Minytrema melanops mitochondrion
AM181023.1	3	20070821	9715	Mirounga leonina mitochondrion
DQ026434.1	1	20080906	75329	Misgurnus anguillicaudatus mitochondrion
AB242171.1	3	20091028	357287	Misgurnus nikolskyi mitochondrion
EU528659.1	1	20081230	57987	Mitsukurina owstoni voucher GN 1057 mitochondrion
FJ595959.1	2	20090517	6573	Mizuhopecten yessoensis mitochondrion
AB099482.1	3	20050414	62295	Mogera wogura mitochondrion
AP006238.1	3	20060325	94237	Mola mola mitochondrion
AP009219.1	1	20090110	392921	Monacanthus chinensis mitochondrion
AM181022.1	3	20070821	29088	Monachus schauinslandi mitochondrion
FJ859902.1	3	20091027	633873	Mongoloraphidia harmandi mitochondrion
AY376688.1	4	20081031	153609	Moniliophthora perniciosa mitochondrion
AY182007.1	4	20061114	224130	Monoblepharella sp. JEL15 mitochondrion
AP004429.1	2	20050416	181435	Monocentris japonicus mitochondrion
AP009169.1	2	20070920	334896	Monodactylus argenteus mitochondrion
AJ508398.1	4	20061121	13616	Monodelphis domestica mitochondrion
AJ554062.1	4	20061114	40151	Monodon monoceros mitochondrion
AP010869.1	2	20101229	556250	Monognathus jesperseni mitochondrion
FJ493497.1	1	20090224	141716	Monomastix sp. OKE-1 chloroplast
AP002945.1	2	20050416	43700	Monopterus albus mitochondrion
AF538053.1	7	20061114	81824	Monosiga brevicollis mitochondrion
HM125538.1	2	20110210	163694	Monsonia speciosa plastid
AP008973.1	1	20050721	48500	Montastraea annularis mitochondrion
AP008977.1	1	20050721	48498	Montastraea faveolata mitochondrion
AP008976.1	1	20050721	48499	Montastraea franksi mitochondrion
AY903296.2	4	20050417	246299	Montipora cactus mitochondrion
FJ859904.1	3	20091027	633874	Mordella atrata mitochondrion
AP010840.1	2	20101229	139719	Moringua edwardsi mitochondrion
AP011576.1	1	20110111	91729	Mormyrops anguilloides mitochondrial DNA
AP011577.1	1	20110111	91731	Mormyrus rume mitochondrial DNA
HM447585.1	1	20100708	34816	Morone saxatilis mitochondrion
AY863211.1	4	20061114	78898	Mortierella verticillata mitochondrion
DQ226511.1	5	20061205	248361	Morus indica chloroplast
EU043465.1	1	20090513	68408	Moschus berezovskii mitochondrion
FJ469675.1	2	20100907	68415	Moschus moschiferus mitochondrion
AP009317.1	1	20090731	418132	Moxostoma congestum mitochondrion
AB242167.1	2	20090215	154821	Moxostoma poecilurum mitochondrion
AP002930.1	2	20050416	48193	Mugil cephalus mitochondrion
AY239042.1	2	20050416	71854	Muntiacus crinifrons mitochondrion
AY225986.1	2	20050416	9888	Muntiacus muntjak mitochondrion
AF527537.1	2	20050415	9886	Muntiacus reevesi mitochondrion
EF035447.1	1	20061015	256803	Muntiacus reevesi micrurus mitochondrion
AP010852.1	2	20101229	118162	Muraenesox bagio mitochondrion
AY172335.1	5	20061114	10090	Mus musculus mitochondrion
EF108342.1	1	20070227	10091	Mus musculus castaneus strain CAST/EiJ mitochondrion
AB042432.1	4	20061114	10092	Mus musculus domesticus mitochondrion
AY675564.1	4	20061114	57486	Mus musculus molossinus mitochondrion
DQ874614.2	2	20080213	39442	Mus musculus musculus strain PWD/Ph mitochondrion
EU352649.1	1	20080501	254704	Mus terricolor mitochondrion
GU001954.1	1	20100930	182747	Musculista senhousia voucher Mse-m1 mitochondrion
GU001953.1	1	20100930	182747	Musculista senhousia mitochondrion
DQ643834.1	2	20060616	214982	Mussa angulosa mitochondrion
AB015962.1	4	20050414	79736	Mustelus manazo mitochondrion
EU090238.1	3	20100914	54734	Mycosphaerella graminicola mitochondrion
AP002922.1	2	20050416	143322	Myctophum affine mitochondrion
AP010779.1	2	20110302	86918	Mylocheilus caurinus mitochondrion
EU979305.1	1	20080813	75356	Mylopharyngodon piceus mitochondrion
AP009501.1	1	20110111	466965	Myomyrus sp. CU6182 mitochondrion
AY345053.2	7	20090414	252580	Myosotella myosotis mitochondrion
AP010862.1	3	20101229	391189	Myrichthys maculosus mitochondrion
AP002940.1	2	20050416	47700	Myripristis berndti mitochondrion
FJ515782.1	2	20090211	55782	Myrmecobius fasciatus mitochondrion
EU938370.1	1	20080930	270849	Myrmecophilus manni mitochondrion
AP010847.1	2	20101229	556240	Myroconger compressus mitochondrion
AY960981.1	2	20050417	94961	Mystacina tuberculata mitochondrion
AY484747.1	2	20050416	6550	Mytilus edulis mitochondrion
AY823624.1	6	20060406	6550	Mytilus edulis X Mytilus trossulus mitochondrion
AY497292.1	4	20061114	29158	Mytilus galloprovincialis mitochondrion
AY823625.1	3	20060302	6551	Mytilus trossulus mitochondrion
HM462080.1	1	20101130	6551	Mytilus trossulus mitochondrion, isolate kan12b
HM462081.1	1	20101130	6551	Mytilus trossulus mitochondrion, isolate kan35a
AJ404477.1	6	20050415	7769	Myxine glutinosa mitochondrion
AY526869.1	1	20041030	70543	Myxocyprinus asiaticus mitochondrion
AF288092.1	5	20061114	5762	Naegleria gruberi mitochondrion
FJ469673.1	2	20100907	37173	Naemorhedus caudatus mitochondrion
FJ207532.1	1	20090428	561742	Naemorhedus griseus mitochondrion
EF558665.1	1	20080508	209574	Naemorhedus swinhoei mitochondrion
EU913475.1	1	20081019	8656	Naja atra mitochondrion
DQ343648.1	2	20081229	35670	Naja naja mitochondrion
FM995166.1	2	20091106	51660	Nakaseomyces bacillisporus mitochondrion
FM995164.1	2	20091106	51657	Nakaseomyces delphensis mitochondrion
DQ923117.1	3	20070227	41776	Nandina domestica plastid
AJ416891.1	3	20061114	30637	Nannospalax ehrenbergi mitochondrion
AP004106.1	4	20061114	170199	Nansenia ardesiaca mitochondrion
AP009405.1	1	20080620	443644	Narcetes erimelas mitochondrion
AP009585.1	1	20091130	492032	Narcetes stomias mitochondrion
AY055727.1	4	20061114	174156	Narceus annularus mitochondrion
AM182028.1	1	20070123	394036	Narcissus degeneration virus
DQ355298.1	2	20061114	43780	Nasalis larvatus mitochondrion
AP009163.1	2	20070920	238060	Naso lopezi mitochondrion
EU827201.1	1	20090918	6485	Nassarius reticulatus mitochondrion
AP009376.1	1	20070414	65948	Nasturtium officinale chloroplast
GQ303444.1	1	20090714	657187	Natural gynogenetic Carassius auratus red var. mitochondrion
AF437291.1	3	20050415	27288	Naumovia castellii mitochondrion
GU176345.1	1	20100713	114905	Naupactus xanthographus mitochondrion
DQ472026.1	3	20061114	34576	Nautilus macromphalus mitochondrion
AJ417719.2	3	20050415	51031	Necator americanus mitochondrion
GU176343.1	1	20100713	219407	Necrophila americana mitochondrion
GQ368658.1	1	20090910	324346	Necturus beyeri mitochondrion
AM420314.1	2	20080602	344322	Negombata magnifica mitochondrion
AP009142.1	1	20070612	373250	Nematalosa japonica mitochondrion
DQ643835.1	2	20060616	388630	Nematostella sp. JVK-2006 mitochondrion
AP010854.1	2	20101229	118170	Nemichthys scolopaceus mitochondrion
AB282837.1	1	20100218	412630	Neoceratias spinifer mitochondrion
AF302933.1	4	20061114	7892	Neoceratodus forsteri mitochondrion
AP004436.1	2	20050416	181447	Neocyttus rhomboidalis mitochondrion
DQ257669.1	2	20070525	61452	Neofelis nebulosa mitochondrion
DQ068951.1	4	20100427	710152	Neogymnocrinus richeri mitochondrion
AP006014.1	2	20081119	32507	Neolamprologus brichardi mitochondrion
AY572539.1	3	20061114	266944	Neomaskellia andropogonis mitochondrion
FJ169955.1	1	20090831	557178	Neopanorpa pulchra mitochondrion
AM181020.1	3	20070821	161930	Neophoca cinerea mitochondrion
AP002921.1	2	20050416	143321	Neoscopelus microchir mitochondrion
AY452691.1	1	20060508	70342	Nephila clavata mitochondrion
AF110138.1	6	20061114	31312	Nephroselmis olivacea mitochondrion
AF137379.1	5	20081001	31312	Nephroselmis olivacea chloroplast
EU293739.1	1	20080404	505245	Nephtys sp. 'San Juan Island' YV-2008 mitochondrion
FJ456943.1	1	20090618	575835	Nerthra sp. NKMT022 mitochondrion
AY793551.1	3	20061114	299218	Nesomachilis australica mitochondrion
AP010850.1	2	20101229	189506	Nessorhamphus ingolfianus mitochondrion
AP010864.1	2	20101229	118177	Nettastoma parviceps mitochondrion
EU427340.1	1	20081224	498951	Neuroctenus parus mitochondrion
K03295.1	5	20000307	5141	Neurospora crassa mitochondrial plasmid
X55361.1	14	20090630	5141	Neurospora crassa linear mitochondrial plasmid (maranhar)
AF133505.1	4	20060719	5142	Neurospora intermedia mitochondrial plasmid Harbin-3
X13801.1	4	20061107	5142	Neurospora intermedia mitochondrial plasmid Varkud
M37268.1	2	20000304	5142	Neurospora intermedia mitochondrial plasmid
EF208087.1	1	20081224	85310	Nezara viridula mitochondrion
HQ890947.1	1	20110302	240163	Nibea albiflora mitochondrion
AB237912.1	8	20070823	4096	Nicotiana sylvestris chloroplast
BA000042.1	9	20110110	4097	Nicotiana tabacum mitochondrion
Z00044.2	102	20061114	4097	Nicotiana tabacum chloroplast
AB240139.1	8	20070823	4098	Nicotiana tomentosiformis chloroplast
AY309457.1	4	20050416	57242	Ninox novaeseelandiae mitochondrion
AB104902.1	2	20061114	128390	Nipponia nippon mitochondrion isolate:Midori
AP008239.1	2	20061114	307441	Nisaetus alboniger mitochondrion
AP008238.1	2	20061114	214438	Nisaetus nipalensis mitochondrion
AP009308.1	1	20100713	118138	Niwaella delicata mitochondrion
HQ622806.1	2	20110128	61852	Nomascus gabriellae mitochondrion
AB504751.1	1	20100407	9586	Nomascus siki mitochondrion
AP009406.1	1	20080620	443646	Normichthys operosus mitochondrion
AP002975.2	4	20101229	143895	Notacanthus chemnitzi mitochondrion
AB127393.1	2	20090215	28800	Notemigonus crysoleucas mitochondrion
EU650204.1	1	20090101	105023	Nothobranchius furzeri strain GRZ mitochondrion
EU660574.1	2	20090612	13813	Nothoceros aenigmaticus mitochondrion
EU024482.1	3	20081127	504482	Nothopuga sp. 1 LP-2008 mitochondrion
DQ991934.1	1	20110119	407123	Notodoris gardineri mitochondrion
AP008924.1	2	20101229	103479	Notopterus notopterus mitochondrion
AJ639874.1	3	20061114	37699	Notoryctes typhlops mitochondrion
DQ536429.1	2	20060719	28795	Notropis stramineus mitochondrion
AP005595.1	1	20041015	8996	Numida meleagris mitochondrion
DQ354691.1	3	20070125	77108	Nuphar advena chloroplast
GU256221.1	1	20091223	34880	Nyctereutes procyonoides mitochondrion
AJ309867.1	4	20061114	9470	Nycticebus coucang mitochondrion
AJ627251.1	3	20061114	34301	Nymphaea alba chloroplast
HM640215.1	1	20110302	13180	Nymphicus hollandicus mitochondrion
DQ666063.1	1	20061107	136195	Nymphon gracile mitochondrion
GU177877.1	1	20101031	146711	Occidozyga martensii mitochondrion
AF348080.1	5	20050824	134600	Ochotona collaris mitochondrion
EF535828.1	1	20080627	130825	Ochotona curzoniae mitochondrion
AJ537415.1	4	20061114	9978	Ochotona princeps mitochondrion
AM946601.1	1	20080804	319761	Ochrogaster lunifer mitochondrion
AF287134.1	4	20061114	2986	Ochromonas danica mitochondrion
FJ456950.1	1	20090618	280162	Ochterus marginatus mitochondrion
AB240156.1	3	20061114	154808	Octopus ocellatus mitochondrion
AB158363.1	6	20061114	6645	Octopus vulgaris mitochondrion
AP009130.1	3	20081119	241363	Odax cyanomelas mitochondrion
AP009231.1	1	20070612	402404	Odaxothrissa vittata mitochondrion
AJ428576.2	5	20061114	62698	Odobenus rosmarus rosmarus mitochondrion
HQ332445.1	1	20110309	9874	Odocoileus virginianus mitochondrion
Z67753.1	13	20050418	2839	Odontella sinensis chloroplast
AB370894.1	1	20080827	492019	Odontesthes sp. Odsp-001 mitochondrion
DQ010651.1	2	20080812	325276	Odontobutis platycephala mitochondrion
AP009208.1	1	20090110	392902	Odonus niger mitochondrion
EU513374.1	2	20090416	244712	Oedaleus decorus asiaticus mitochondrion
AY728213.1	2	20040922	107992	Oedipina poelzi mitochondrion
EU677193.1	2	20081126	55995	Oedogonium cardiacum chloroplast
EU262887.1	3	20081216	3940	Oenothera argillicola chloroplast
EU262889.1	3	20081216	3942	Oenothera biennis chloroplast
AJ271079.3	13	20081118	85636	Oenothera elata subsp. hookeri chloroplast
EU262890.1	4	20081229	482428	Oenothera glazioviana chloroplast
EU262891.1	3	20081216	482429	Oenothera parviflora chloroplast
GQ888716.1	1	20100213	61180	Oesophagostomum dentatum mitochondrion
FM161883.1	1	20100519	61181	Oesophagostomum quadrispinulatum mitochondrion
EU914848.1	2	20100107	133961	Ognevia longipennis mitochondrion
AY525783.1	1	20050618	432798	Okamejei kenojei mitochondrion
GU228899.1	1	20091224	4146	Olea europaea chloroplast
AP009368.1	1	20070414	74718	Olimarabidopsis pumila chloroplast
DQ365900.1	2	20061114	51324	Oltmannsiellopsis viridis mitochondrion
DQ291132.1	2	20061114	51324	Oltmannsiellopsis viridis chloroplast
AY345048.2	7	20090414	36933	Onchidella celtica mitochondrion
AF015193.1	3	20000303	6282	Onchocerca volvulus mitochondrion
GQ324949.1	2	20100615	96474	Oncidium Gower Ramsey chloroplast
FJ997214.1	1	20090727	56141	Oncomelania hupensis mitochondrion
EU001660.1	1	20090630	111462	Oncomelania hupensis hupensis mitochondrion
EU079378.1	1	20090831	105595	Oncomelania hupensis robertsoni mitochodrion
AY886762.1	3	20060616	72053	Oncorhynchus clarkii henshawi mitochondrion
EF455489.1	1	20070406	8017	Oncorhynchus gorbuscha mitochondrion
EF126369.1	1	20070330	8019	Oncorhynchus kisutch mitochondrion
EF105342.1	1	20070330	412663	Oncorhynchus masou 'Biwa' mitochondrion
DQ858456.1	1	20061231	173242	Oncorhynchus masou formosanus mitochondrion
DQ864464.1	1	20061231	8021	Oncorhynchus masou ishikawae mitochondrion
DQ864465.1	1	20061231	90313	Oncorhynchus masou masou mitochondrion
L29771.1	8	20061114	8022	Oncorhynchus mykiss mitochondrion
EF055889.1	1	20061115	8023	Oncorhynchus nerka mitochondrion
AF392054.1	2	20050415	74940	Oncorhynchus tshawytscha mitochondrion
AB282843.1	1	20100218	412658	Oneirodes thompsoni mitochondrion
AB219833.1	2	20081213	43130	Onion yellow dwarf virus isolate: G79
FJ555185.1	1	20100216	583350	Onisimus nanseni mitochondrion
AY639938.1	3	20060901	280588	Onychiurus orientalis mitochondrion, partial
DQ333820.1	1	20060511	113382	Onychodactylus fischeri mitochondrion
FN562577.1	2	20100602	55617	Ophiocomina nigra mitochondrion
EU921899.1	1	20081019	8665	Ophiophagus hannah mitochondrion
AF314589.1	2	20050415	35052	Ophiopholis aculeata mitochondrion
AP002978.1	4	20101229	118157	Ophisurus macrorhynchos mitochondrion
AM404180.1	2	20080512	72672	Ophiura albida mitochondrion
AY184223.1	2	20050416	224378	Ophiura lutkeni mitochondrion
HM367070.1	1	20101028	121214	Opilio parietinus mitochondrion
HM008997.1	1	20100609	574546	Opisthopatus cinctipes mitochondrion
AP004110.1	4	20061114	170206	Opisthoproctus soleatus mitochondrion
EU921260.2	4	20100826	147828	Opisthorchis felineus mitochondrion
DQ872160.1	1	20070406	163134	Oplegnathus fasciatus mitochondrion
AP011066.1	1	20090822	163135	Oplegnathus punctatus mitochondrion
AB218720.1	1	20090610	332245	Oplurus grandidieri mitochondrion
DQ367044.1	4	20070724	141458	Opsariichthys bidens mitochondrion
AB218897.1	2	20090215	39568	Opsariichthys uncirostris mitochondrion
GQ292769.1	2	20100813	337810	Oratosquilla oratoria mitochondrion
AY961084.1	1	20060331	195264	Orbinia latreillii mitochondrion
JF339977.1	1	20110318	682059	Orcaella heinsohni isolate Orchei28  mitochondrion
EU016195.1	1	20080331	48706	Orchesella villosa mitochondrion
HQ405752.1	2	20101203	9733	Orcinus orca mitochondrion
FJ207535.1	1	20090428	34873	Oreamnos americanus mitochondrion
GU370125.1	1	20100119	47969	Oreochromis aureus mitochondrion
AY597335.1	1	20050731	8127	Oreochromis mossambicus mitochondrion
GU238433.1	1	20091223	8128	Oreochromis niloticus mitochondrion
GU477628.1	1	20110131	8128	Oreochromis niloticus strain America mitochondrion
GU477625.1	1	20110131	8128	Oreochromis niloticus strain Egypt mitochondrion
GU477624.1	1	20110131	8128	Oreochromis niloticus strain GIFT mitochondrion
GU477627.1	1	20110131	8128	Oreochromis niloticus strain Guangdong mitochondrion
GU477626.1	1	20110131	8128	Oreochromis niloticus strain Philippines mitochondrion
HM067614.1	1	20100421	743960	Oreochromis sp. 'red tilapia' mitochondrion
GU477631.1	1	20110131	743960	Oreochromis sp. 'red tilapia' mitochondrion
AP009126.1	3	20081119	371725	Oreochromis sp. KM-2006 mitochondrion
EU427341.1	1	20081224	82746	Orius niger mitochondrion
AY309259.1	4	20050416	29017	Ornithoctonus huwena mitochondrion
AB073679.1	7	20100601	6938	Ornithodoros moubatamitochondrion
AB105451.1	4	20061114	34594	Ornithodoros porcinus mitochondrion
X83427.1	12	20061114	9258	Ornithorhynchus anatinus mitochondrion
FJ478174.1	3	20090612	576952	Orussus occidentalis mitochondrion
Y18475.1	5	20061114	9818	Orycteropus afer mitochondrion
AJ001588.1	4	20061114	9986	Oryctolagus cuniculus mitochondrion
AP006728.1	6	20061114	4536	Oryza nivara chloroplast
AP011076.1	2	20100427	4529	Oryza rufipogon mitochondrion
D00293.1	5	20060315	4530	Oryza sativa mitochondrial plasmid-like DNA B1
DQ167399.1	2	20060701	39946	Oryza sativa Indica Group mitochondrion
AY522329.1	4	20050416	39946	Oryza sativa Indica Group chloroplast
D00564.1	5	20071128	39946	Oryza sativa Indica Group mitochondrial plasmid-like DNA B2
BA000029.3	12	20080222	39947	Oryza sativa Japonica Group mitochondrion
X15901.1	117	20081023	39947	Oryza sativa Japonica Group chloroplast
AY522330.1	4	20050416	39947	Oryza sativa Japonica Group cultivar Nipponbare chloroplast
DQ167400.1	2	20060701	39947	Oryza sativa Japonica Group cultivar Nipponbare mitochondrion
GU592207.1	1	20110131	39947	Oryza sativa Japonica Group cultivar Nipponbare voucher AC01-1001045 chloroplast
AB498069.1	1	20090715	291360	Oryzias dancena mitochondrion
GU013789.1	1	20091021	291360	Oryzias dancena isolate Indonesia mitochondrion
AB498067.1	1	20090715	123683	Oryzias javanicus mitochondrion
AP004421.1	2	20050416	8090	Oryzias latipes mitochondrion
AB498064.1	1	20090715	104659	Oryzias luzonensis mitochondrion
AB498068.1	1	20090715	123685	Oryzias minutillus mitochondrion
GU013788.1	1	20091021	183150	Oryzias sinensis mitochondrion
GQ244474.1	1	20090922	543905	Oscaecilia ochrocephala mitochondrion
EF081250.1	1	20070205	386100	Oscarella carmela mitochondrion
HQ269361.1	2	20110128	121494	Oscarella lobularis mitochondrion
HQ269364.1	2	20110128	908211	Oscarella malakhovi mitochondrion
HQ269355.1	2	20110128	764031	Oscarella microlobata mitochondrion
HQ269353.1	2	20110128	252962	Oscarella tuberculata mitochondrion
HQ269358.1	2	20110128	764033	Oscarella viridis mitochondrion, isolate DL030
HM106493.1	1	20110310	8014	Osmerus mordax mitochondrion
AB043025.1	4	20101229	109271	Osteoglossum bicirrhosum mitochondrion
AM493868.1	2	20080326	184242	Osteolaemus tetraspis mitochondrion
AP004431.1	2	20050416	181437	Ostichthys japonicus mitochondrion
AP009176.1	2	20070920	384598	Ostracion immaculatus mitochondrion
HM015199.1	1	20110309	74434	Ostrea denselamellosa mitochondrion
CR954199.2	3	20070531	70448	Ostreococcus tauri chloroplast
CR954200.2	4	20070328	70448	Ostreococcus tauri mitochondrion
AF467260.1	4	20061208	93504	Ostrinia furnacalis mitochondrion
AF442957.1	8	20081026	29057	Ostrinia nubilalis mitochondrion
FJ751803.1	2	20100921	73107	Otis tarda mitochondrion
AB371093.1	1	20090603	9463	Otolemur crassicaudatus mitochondrion
FJ207536.1	1	20090428	37176	Ovibos moschatus mitochondrion
HM236188.1	2	20100907	30527	Ovis ammon mitochondrion
AF010406.1	7	20050415	9940	Ovis aries mitochondrion
HM236186.1	2	20100907	59896	Ovis vignei mitochondrion
AB175670.1	3	20080924	8769	Ovophis okinavensis mitochondrion
EF437157.1	2	20080101	165482	Oxya chinensis mitochondrion
AP009221.1	1	20090110	303724	Oxymonacanthus longirostris mitochondrion
DQ333812.1	1	20060511	288317	Pachyhynobius shangchengensis mitochondrion
AY278317.1	2	20061114	38123	Pachypsylla venusta mitochondrion
AB305023.1	2	20080222	98819	Pagellus bogaraveo mitochondrion
AB124801.1	2	20050414	63415	Pagrus auriga mitochondrion
AP002949.1	2	20050416	143350	Pagrus major mitochondrion
AF150756.1	3	20050415	111067	Pagurus longicarpus mitochondrion
FJ541030.1	2	20100220	161718	Palea steindachneri mitochondrion
AM493870.1	2	20080326	84099	Paleosuchus palpebrosus mitochondrion
AM493869.1	2	20080326	38658	Paleosuchus trigonatus mitochondrion
EU357803.1	3	20100826	697302	Pampus sp. LY-2009 mitochondrion
D38116.1	19	20050417	9597	Pan paniscus mitochondrion
D38113.1	17	20050417	9598	Pan troglodytes mitochondrion
HM068585.1	2	20110210	756884	Pan troglodytes ellioti mitochondrion
GU112740.1	1	20091201	37010	Pan troglodytes schweinfurthii mitochondrion
GU112738.1	1	20091201	37011	Pan troglodytes troglodytes mitochondrion
GU112742.1	1	20091201	91950	Pan troglodytes vellerosus mitochondrion
GU112739.1	1	20091201	37012	Pan troglodytes verus mitochondrion
AY582139.1	4	20050416	4054	Panax ginseng chloroplast
DQ780884.1	3	20061220	56262	Pandion haliaetus mitochondrion
AY762971.1	3	20061227	30993	Pangasianodon gigas mitochondrion
AB242168.1	2	20090215	357285	Pangio anguillaris mitochondrion
HM367068.1	2	20110123	50023	Panonychus citri mitochondrion
EU682403.1	6	20100519	50024	Panonychus ulmi mitochondrion
EF551002.1	1	20080508	9691	Panthera pardus mitochondrion
EF551003.1	1	20080508	9694	Panthera tigris mitochondrion
HM589215.1	1	20101208	253258	Panthera tigris amoyensis isolate P27 mitochondrion
HM589214.1	1	20101208	253258	Panthera tigris amoyensis isolate P25 mitochondrion
DQ523162.1	2	20070818	271451	Pantherophis slowinskii mitochondrion
DQ191826.1	2	20051006	59538	Pantholops hodgsonii mitochondrion
AB043068.1	4	20101229	8276	Pantodon buchholzi mitochondrion
AB071201.1	5	20061228	6736	Panulirus japonicus mitochondrial
GQ223286.1	1	20101231	150431	Panulirus ornatus mitochondrion
HM446347.1	1	20110216	150431	Panulirus ornatus mitochondrion
GQ292768.1	2	20100826	71578	Panulirus stimpsoni mitochondrion
GU269271.1	2	20110126	345428	Paphia euglypta mitochondrion
FJ810212.1	1	20100407	501396	Papilio maraho mitochondrion
Y18001.1	5	20050418	9557	Papio hamadryas mitochondrion
AP008926.1	2	20101229	311468	Papyrocranus congoensis mitochondrion
J04815.1	39	20061114	7656	Paracentrotus lividus mitochondrion
FJ968741.1	2	20090913	3074	Parachlorella kessleri chloroplast
AY955840.1	3	20070628	121759	Paracoccidioides brasiliensis mitochondrion
AP010860.1	2	20101229	391200	Paraconger notialis mitochondrion
EU877959.1	1	20090323	565004	Paracyclopina nana mitochondrion
EU349015.1	1	20081008	490128	Parafronurus youi mitochondrion
AF219379.2	7	20061114	34504	Paragonimus westermani mitochondrion
FJ168561.1	2	20090402	587285	Parahaemoproteus vireonis mitochondrion
EF192032.2	2	20110227	356780	Parajulis poecilepterus mitochondrion
AP007279.1	1	20060224	299325	Parakneria cameronensis mitochondrion
AP011211.1	1	20110302	516036	Paralaubuca typus mitochondrion
AB028664.1	11	20090215	8255	Paralichthys olivaceus mitochondrion
AP009222.1	1	20090110	303718	Paraluteres prionurus mitochondrion
X15917.1	31	20050418	5889	Paramecium aurelia mitochondrion
FN424190.1	1	20100624	5885	Paramecium caudatum mitochondrion
AY458597.1	2	20050708	164972	Paramesotriton hongkongensis mitochondrion
AP009223.1	1	20090110	392923	Paramonacanthus choirocephalus mitochondrion
AP009614.1	1	20110111	91733	Paramormyrops gabonensis mitochondrion
AP011579.1	1	20110111	687777	Paramormyrops sp. CU 6227 mitochondrial DNA
AP011581.1	1	20110111	687779	Paramormyrops sp. CU 6230 mitochondrial DNA
AP011578.1	1	20110111	687776	Paramormyrops sp. CU 6239 mitochondrial DNA
AP011580.1	1	20110111	687778	Paramormyrops sp. CU 6246 mitochondrial DNA
GU564481.1	1	20101229	743461	Paranemertes cf. peregrina SCS-2010 mitochondrion
FJ456951.1	1	20090618	575836	Paraplea frontalis mitochondrion
AP009168.1	2	20070920	360507	Parapristipoma trilineatum mitochondrion
EF107158.1	2	20071101	255644	Parargyrops edita mitochondrion
AY619710.1	3	20050416	34758	Paraspadella gotoi mitochondrion
AB525762.1	1	20091016	683134	Parastichopus nigripunctatus mitochondrion
AP010886.1	1	20090127	565083	Parataeniophorus gulosus mitochondrion
AP009508.1	3	20091127	80772	Paratilapia polleni mitochondrion
AP004433.1	2	20050416	181440	Parazen pacificus mitochondrion
AP009504.1	3	20091127	238224	Paretroplus maculatus mitochondrion
FJ871125.1	1	20100407	213924	Parnassius bremeri mitochondrion
GU120098.1	1	20091130	35935	Parthenium argentatum chloroplast
HQ122652.1	2	20110304	31732	Passion fruit woodiness virus, isolate PWV-MU2
D16387.1	14	20100615	7594	Patiria pectinifera mitochondrion
CP000815.1	2	20100421	39717	Paulinella chromatophora chromatophore
EU417811.1	2	20091009	9050	Pavo muticus mitochondrion
DQ643836.1	2	20060616	367766	Pavona clavus mitochondrion
AP003427.1	1	20090224	9829	Pecari tajacu mitochondrion
EU621793.1	2	20081224	518099	Pedetontus silvestrii mitochondrion
AF116775.1	6	20061114	3159	Pedinomonas minor mitochondrion
FJ968740.1	2	20090913	3159	Pedinomonas minor chloroplast
AP005984.1	2	20080116	215342	Pegasus volitans mitochondrion
DQ897681.1	2	20061114	4031	Pelargonium x hortorum chloroplast
AB239597.1	2	20090215	317925	Pelecus cultratus mitochondrion
AP009619.1	1	20100627	260506	Pellona flavipinnis mitochondrion
AP009232.1	1	20070612	402406	Pellonula leonensis mitochondrion
AJ871086.1	2	20061114	61616	Pelobates cultripes mitochondrion
AF039066.1	6	20050415	44522	Pelomedusa subrufa mitochondrion
HM746659.1	1	20110102	175791	Pelteobagrus nitidus mitochondrion
HM746660.1	1	20110102	175792	Pelteobagrus vachellii mitochondrion
AF217843.1	4	20050415	6687	Penaeus monodon mitochondrion
HQ834451.1	2	20110216	175834	Penelopides panini mitochondrion
HQ622809.1	1	20110131	36651	Penicillium digitatum strain pd01 mitochondrion
AY347307.1	3	20050416	37727	Penicillium marneffei mitochonrion
HQ890946.1	1	20110302	118565	Pennahia argentata mitochondrion
AJ639872.1	3	20061114	37737	Perameles gunnii mitochondrion (partial)
DQ536430.1	2	20060719	163822	Percina macrolepida mitochondrion
AP002928.1	2	20050416	143327	Percopsis transmontana mitochondrion
FJ752431.1	4	20100615	114919	Perdix dauurica mitochondrion
EF494507.1	2	20070711	168854	Perionyx excavatus mitochondrion
AB371095.1	1	20090603	9472	Perodicticus potto mitochondrion
AP009224.1	1	20090110	392925	Pervagor janthinosoma mitochondrion
AY956355.1	2	20060607	50562	Petrobius brevistylis mitochondrion
AP009609.1	1	20110111	112157	Petrocephalus microphthalmus mitochondrion
AP009502.1	1	20110111	91712	Petrocephalus soudanensis mitochondrion
U11880.1	9	20061114	7757	Petromyzon marinus mitochondrion
AP004450.1	2	20050416	57847	Petroscirtes breviceps mitochondrion
DQ409327.1	3	20081127	41426	Phacochoerus africanus mitochondrion
EU427342.1	1	20081224	498930	Phaenacantha marcida mitochondrion
GQ376531.1	1	20100127	37308	Phaeoceros laevis mitochondrion
EF067920.1	4	20070823	2850	Phaeodactylum tricornutum chloroplast
HQ840789.1	1	20110306	2850	Phaeodactylum tricornutum mitochondrion
AY728233.1	2	20040922	52110	Phaeognathus hubrichti mitochondrion
EU053989.1	2	20080103	321614	Phaeosphaeria nodorum SN15 mitochondrion
AP009043.1	2	20061114	57073	Phaethon rubricauda mitochondrion
GQ338834.1	2	20101216	169999	Phakopsora meibomiae mitochondrion
GQ332420.1	2	20101216	170000	Phakopsora pachyrhizi mitochondrion
AY916449.1	3	20060113	308872	Phalaenopsis aphrodite subsp. formosana plastid
EU523757.1	1	20080401	118624	Phalangium opilio mitochondrion
AM292602.1	2	20071003	395376	Phallusia fumigata mitochondrion
AM292320.1	1	20070917	59560	Phallusia mammillata mitochondrion
DQ068952.1	3	20100303	329963	Phanogenia gracilis mitochondrion
AJ639869.1	3	20061114	9293	Phascogale tapoatafa mitochondrion
EF583817.1	1	20090422	419950	Phascolosoma esculenta mitochondrion
DQ886273.1	9	20080530	3885	Phaseolus vulgaris cultivar Negro Jamapa chloroplast
FJ752430.1	4	20100615	9054	Phasianus colchicus mitochondrion
AB164626.1	1	20080401	9055	Phasianus versicolor mitochondrion
DQ536431.1	2	20060719	71759	Phenacobius mirabilis mitochondrion
AB054129.1	5	20090215	42486	Phenacogrammus interruptus mitochondrion
AY630340.1	5	20061114	36667	Philaenus spumarius mitochondrion
EU370925.1	1	20090101	491859	Phlaeoba albonema mitochondrion
AB477467.1	3	20110114	590988	Phobaeticus serratipes mitochondrion
AM181029.1	4	20070821	39088	Phoca fasciata mitochondrion
AM181030.1	3	20070821	39089	Phoca groenlandica mitochondrion
AM181031.1	3	20070821	39090	Phoca largha mitochondrion
X63726.1	14	20050418	9720	Phoca vitulina mitochondrion
AM181019.1	3	20070821	34888	Phocarctos hookeri mitochondrion
AJ554063.1	4	20061114	9742	Phocoena phocoena mitochondrion
FJ460596.1	1	20081216	575499	Phoenicolacerta kulzeri mitochondrion
EF532932.1	3	20081127	435638	Phoenicopterus ruber roseus mitochondrion
GU811709.2	4	20100917	42345	Phoenix dactylifera chloroplast
X76544.1	7	20000216	42345	Phoenix dactylifera mitochondrial plasmid
AP004449.1	3	20100826	283025	Pholis crassispina mitochondrion
AP009061.1	1	20061211	357291	Phoxinus percnurus mantschuricus mitochondrion
AP007280.1	2	20060419	169291	Phractolaemus ansorgii mitochondrion
AB477460.1	2	20110114	590990	Phraortes illepidus mitochondrion
AB477464.1	2	20110114	590991	Phraortes sp. Iriomote Island mitochondrion
EU520641.1	1	20080401	507471	Phrynus sp. 1 SEM-2008 mitochondrion
EU569764.1	2	20090607	339843	Phthonandria atrilineata mitochondrion
AB027295.1	2	20010319	5791	Physarum polycephalum mitochondrion
D29637.1	8	20070915	5791	Physarum polycephalum mitochondrial plasmid-like DNA
AB251495.1	8	20080501	3218	Physcomitrella patens mitochondrion
AP005672.1	10	20081126	145481	Physcomitrella patens subsp. patens chloroplast
GU945504.1	1	20100908	62778	Physemacris variolosa mitochondrion
AJ277029.2	4	20061114	9755	Physeter catodon mitochondrion
AP004409.1	2	20050416	181408	Physiculus japonicus mitochondrion
EU427343.1	1	20081224	209986	Physopelta gutta mitochondrion
U17009.2	10	20061114	4787	Phytophthora infestans mitochondrion
AY894835.1	3	20100623	4787	Phytophthora infestans haplotype Ia mitochondrion
AY898627.1	3	20100623	4787	Phytophthora infestans haplotype IIa mitochondrion
AY898628.1	3	20100623	4787	Phytophthora infestans haplotype IIb mitochondrion
DQ832718.1	1	20070501	164328	Phytophthora ramorum mitochondrion
DQ832717.1	1	20070501	67593	Phytophthora sojae mitochondrion
GQ222414.1	1	20100407	44414	Phytoseiulus persimilis mitochondrion
HQ915867.1	1	20110302	34924	Pica pica mitochondrion
EU998739.3	5	20090422	3332	Picea sitchensis chloroplast
HQ616673.1	1	20110113	4905	Pichia angusta strain DL-1 mitochondrion
D31785.1	14	20080630	4907	Pichia canadensis mitochondrion
EU597124.1	3	20091023	270461	Pieris melete mitochondrion
DQ355301.1	2	20061114	164648	Piliocolobus badius mitochondrion
EU998740.4	5	20110217	3339	Pinus contorta chloroplast
EU998741.4	5	20110217	71632	Pinus gerardiana chloroplast
AY228468.2	4	20070420	88728	Pinus Koraiensis chloroplast
EU998742.4	5	20110217	3342	Pinus krempfii chloroplast
EU998743.4	5	20110218	3343	Pinus lambertiana chloroplast
EU998744.3	4	20090422	3344	Pinus longaeva chloroplast
EU998745.4	5	20110218	151562	Pinus monophylla chloroplast
EU998746.4	5	20110218	71643	Pinus nelsonii chloroplast
D17510.1	19	20080418	3350	Pinus thunbergii chloroplast
DQ887677.1	3	20061215	398741	Piper cenocladum chloroplast
AB061528.1	2	20050414	105295	Pipistrellus abramus mitochondrion
X55514.2	39	20050418	7612	Pisaster ochraceus mitochondrion
EU239688.1	1	20080619	279652	Pista cristata mitochondrion
HM029370.1	2	20101207	3888	Pisum sativum chloroplast
DQ088274.1	3	20070801	6577	Placopecten magellanicus mitochondrion
DQ889457.1	1	20070131	401704	Placozoan sp. BZ49 mitochondrion
DQ889458.1	1	20070131	401705	Placozoan sp. BZ2423 mitochondrion
DQ889456.1	1	20070131	401703	Placozoan sp. BZ10101 mitochondrion
HQ269352.1	2	20110128	908212	Plakina crypta mitochondrion
HQ269360.1	2	20110128	450361	Plakina jani mitochondrion, isolate DL036
HQ269351.1	2	20110128	908213	Plakina monolopha mitochondrion, isolate CB001
HQ269354.1	2	20110128	908215	Plakina sp. DVL-2010 mitochondrion
HQ269356.1	2	20110128	764034	Plakina trilopha mitochondrion, isolate DL024
EU237487.1	3	20090707	295227	Plakortis angulospiculatus mitochondrion
HQ269359.1	2	20110128	908214	Plakortis halichondrioides mitochondrion, isolate DL034
HQ269362.1	2	20110128	252963	Plakortis simplex mitochondrion, isolate DL048
AB558173.1	1	20101028	5821	Plasmodium berghei mitochondrion
X95275.2	26	20050523	5833	Plasmodium falciparum complete gene map of plastid-like DNA (IR-A)
X95276.2	27	20050526	5833	Plasmodium falciparum complete gene map of plastid-like DNA (IR-B)
AJ276844.1	2	20001124	5833	Plasmodium falciparum mitochondrion
DQ642846.1	2	20080614	137071	Plasmodium falciparum HB3 apicoplast
DQ642845.1	2	20080614	137071	Plasmodium falciparum HB3 mitochondrion
EF079654.2	3	20080403	31275	Plasmodium floridense mitochondrion
AY722799.1	1	20050714	5857	Plasmodium fragile mitochondrion
AB250690.1	3	20070116	5849	Plasmodium gallinaceum mitochondrion
HM032052.1	2	20110309	52288	Plasmodium inui mitochondrion
AB250415.1	3	20070116	111598	Plasmodium juxtanucleare mitochondrion
AY722797.1	1	20050714	5850	Plasmodium knowlesi mitochondrion
EF079653.2	3	20080403	27989	Plasmodium mexicanum mitochondrion
AJ251941.1	2	20001124	5854	Plasmodium reichenowi mitochondrion
AY733088.1	2	20050701	85471	Plasmodium relictum mitochondrion
AY722798.1	1	20050714	5859	Plasmodium simium isolate Fonseca MRA-353 mitochondrion
AY598074.1	1	20050714	5855	Plasmodium vivax mitochondrion
M29000.1	7	20000304	5861	Plasmodium yoelii mitochondrion
GQ199608.1	1	20090603	257867	Platalea leucorodia mitochondrion
EF455490.1	1	20070406	259913	Platalea minor mitochondrion
AJ554058.1	4	20061114	48752	Platanista minor mitochondrion
DQ923116.1	3	20070227	4403	Platanus occidentalis plastid
AP006825.1	1	20090822	75032	Platax orbicularis mitochondrion
GU475132.1	1	20100309	637517	Platevindex mortoni mitochondrion
EF424428.1	1	20080531	195632	Platichthys stellatus mitochondrion
AF178678.1	4	20050415	6359	Platynereis dumerilii mitochondrion
DQ256377.1	1	20060316	55544	Platysternon megacephalum mitochondrion
AP004107.1	4	20061114	170202	Platytroctes apus mitochondrion
AB047553.2	4	20050414	61084	Plecoglossus altivelis mitochondrion
DQ101270.1	2	20070317	160734	Plectropomus leopardus mitochondrion
AY597334.1	2	20070321	195321	Plesiobatis daviesi mitochondrion
AB016606.1	9	20080924	463521	Plestiodon egregius mitochondrion
AY728232.1	2	20040922	141976	Plethodon cinereus mitochondrion
AY728223.1	2	20040922	46761	Plethodon elongatus mitochondrion
AY728222.1	2	20040922	154587	Plethodon petraeus mitochondrion
AF126285.1	1	19990628	5322	Pleurotus ostreatus mitochondrial plasmid mlp1
EF204913.1	3	20080306	5322	Pleurotus ostreatus mitochondrion
FJ999996.2	2	20091029	280637	Pleurozia purpurea mitochondrion
HQ586061.1	1	20101205	35206	Plocamiocolax pulvinata mitochondrion
GU133622.1	1	20100121	4754	Pneumocystis carinii mitochondrion
EF526302.1	1	20070912	46731	Pocillopora damicornis mitochondrion
EF526303.1	1	20070912	367768	Pocillopora eydouxi mitochondrion
FJ460597.1	1	20081216	64176	Podarcis muralis mitochondrion
FJ460598.1	1	20081216	65484	Podarcis siculus mitochondrion
GU592504.1	2	20110201	257846	Podoces hendersoni mitochondrion
X55026.1	12	20081023	5145	Podospora anserina mitochondrion
AY639939.1	2	20060829	50589	Podura aquatica mitochondrion, partial
AB166795.1	3	20061114	103695	Pogona vitticeps mitochondrion
FR751400.1	1	20110110	185739	Pollachius pollachius mitochondrion, isolate Pp1
FR751399.1	1	20110110	8060	Pollachius virens mitochondrion, isolate Pv1
AY456188.1	4	20061114	36137	Pollicipes polymerus mitochondrion
AP011582.1	1	20110111	203438	Pollimyrus adspersus mitochondrial DNA
AB266749.1	1	20090610	38934	Polychrus marmoratus mitochondrion
AB034826.1	3	20050414	81385	Polymixia japonica mitochondrion
AP002927.1	2	20050416	143326	Polymixia lowei mitochondrion
AP004353.1	3	20101229	7913	Polyodon spathula mitochondrion
AY458598.1	3	20050708	68449	Polypedates megacephalus mitochondrion
EU417812.1	2	20091009	9059	Polyplectron bicalcaratum mitochondrion
U62532.1	5	20050418	49895	Polypterus ornatipinnis mitochondrion
AP004352.1	3	20101229	178879	Polypterus senegalus senegalus mitochondrion
AY700145.1	3	20061114	13642	Polysphondylium pallidum mitochondrion
FJ171325.1	2	20090327	279481	Polystoechotes punctatus mitochondrion
EF645804.1	2	20081126	351368	Polytomella capuana mitochondrion
GU108480.1	2	20100929	351366	Polytomella sp. SAG 63-10 chromosome 1 mitochondrion
X97707.1	8	20080318	9601	Pongo abelii mitochondrion
D38115.1	14	20061208	9600	Pongo pygmaeus mitochondrion
AJ554060.1	4	20061114	48723	Pontoporia blainvillei mitochondrion
AP008956.1	3	20070922	43335	Populus alba chloroplast
EF489041.1	1	20070321	3694	Populus trichocarpa chloroplast
AP006739.1	4	20061005	262771	Porichthys myriaster mitochondrion
DQ643837.1	2	20060616	104760	Porites porites mitochondrion
AP002935.1	2	20050416	143334	Poromitra oscitans mitochondrion
AF114794.1	6	20061114	2787	Porphyra purpurea mitochondrion
U38804.1	5	20050417	2787	Porphyra purpurea chloroplast
AP006715.1	2	20060418	2788	Porphyra yezoensis chloroplast
EF532934.1	2	20080326	439704	Porphyrio hochstetteri mitochondrion
AB093006.1	2	20050414	210409	Portunus trituberculatus mitochondrion
GQ996416.1	2	20100319	145637	Potamopyrgus antipodarum mitochondrion
GQ996415.1	2	20100319	268618	Potamopyrgus estuarinus mitochondrion
AJ639873.1	4	20061121	9310	Potorous tridactylus mitochondrion
DQ355299.1	2	20061114	78451	Presbytis melalophos mitochondrion
DQ463747.1	2	20061130	37621	Priapulus caudatus mitochondrion
EU877952.1	2	20081031	295936	Priasilpha obscura mitochondrion
AB556947.1	1	20110110	507543	Pristomyrmex punctatus mitochondrion, country: Japan: Gifu, Kii-Nagashima
GU386355.1	1	20110102	157668	Procapra przewalskii mitochondrion
AB096865.1	3	20050414	9813	Procavia capensis mitochondrion
AP010880.1	1	20090127	565081	Procetichthys kreffti mitochondrion
AB297804.1	1	20070316	9654	Procyon lotor mitochondrion
EU082030.1	2	20090605	367866	Procypris rabaudi mitochondrion
FJ463038.1	2	20110227	575527	Proedromys liangshanensis mitochondrion
AB286049.1	1	20080715	379532	Propithecus coquereli mitochondrion
GU563431.1	1	20100721	42746	Proteromonas lacertae mitochondrion
GQ368659.1	1	20090910	221568	Proteus anguinus mitochondrion
EU526394.1	1	20081106	508445	Protohermes concolorus mitochondrion
FJ532058.1	2	20100602	581055	Protohynobius puxiongensis mitochondrion
L42813.1	5	20061114	27779	Protopterus dolloi mitochondrion
U02970.1	10	20061114	3111	Prototheca wickerhamii mitochondrion
GU294758.1	1	20100111	614657	Prumna arctica mitochondrion
HQ336405.1	2	20110210	3760	Prunus persica chloroplast
FJ424074.1	1	20090806	157325	Psacothea hilaris mitochondrion
DQ080041.1	3	20060316	569598	Psammobates pardalis mitochondrion
AP011067.1	1	20090822	316143	Psenes cyanophrys mitochondrion
AY571339.1	3	20070311	61976	Psephurus gladius mitochondrion
AP009226.1	1	20090110	392929	Pseudalutarius nasicornis mitochondrion
AP009058.1	1	20061211	263870	Pseudaspius leptocephalus mitochondrion
AY359242.1	4	20081001	160070	Pseudendoclonium akinetum mitochondrion
AY835431.1	3	20061114	160070	Pseudendoclonium akinetum chloroplast
AB054127.1	5	20090215	78873	Pseudobagrus tokiensis mitochondrion
AP009209.1	1	20090110	392903	Pseudobalistes flavimarginatus mitochondrion
AY562127.1	4	20060216	205354	Pseudocarcinus gigas mitochondrion
EU024483.1	1	20071119	58148	Pseudocellus pearsei mitochondrion
AJ639870.1	3	20061114	9333	Pseudocheirus peregrinus mitochondrion (partial)
HQ269357.1	2	20110128	61082	Pseudocorticium jarrei mitochondrion, isolate DL028
AP009310.1	2	20110302	418128	Pseudogobio esocinus mitochondrion
FJ532059.1	2	20100602	157107	Pseudohynobius flavomaculatus mitochondrion
FJ532060.1	2	20100602	365029	Pseudohynobius shuichengensis mitochondrion
FJ207537.1	1	20090428	59542	Pseudois nayaur mitochondrion
EU560728.1	1	20090202	98376	Pseudolabrus eoethinus mitochondrion
AP006019.1	2	20081119	98377	Pseudolabrus sieboldi mitochondrion
EU728579.1	3	20100421	427734	Pseudoleptodeira latifasciata mitochondrion
FJ606784.1	1	20091231	476809	Pseudolestes mirabilis mitochondrion
AP009225.1	1	20090110	392927	Pseudomonacanthus peroni mitochondrion
EU305669.1	1	20101104	221128	Pseudomys chapmani mitochondrion
HM535648.1	1	20100727	181119	Pseudopodoces humilis mitochondrion
DQ640646.1	2	20060616	204379	Pseudopterogorgia bipinnata mitochondrion
EU597300.1	1	20080822	497908	Pseudopungtungia nigra mitochondrion
FJ515917.1	1	20110102	581200	Pseudopungtungia tenuicorpus mitochondrion
AB239599.1	2	20090215	90751	Pseudorasbora pumila mitochondrion
HM060332.1	2	20100708	82174	Pseudorca crassidens mitochondrion
AB262447.2	2	20100421	118229	Pseudotrapelus sinaitus mitochondrion
AY728220.1	2	20040922	134762	Pseudotriton ruber mitochondrion
DQ026436.1	1	20080906	327762	Psilorhynchus homaloptera mitochondrion
AP004638.1	5	20060516	3240	Psilotum nudum chloroplast
EF409976.2	2	20080127	423481	Pteragogus flagellifer mitochondrion
HM535629.1	1	20100727	104588	Pteridium aquilinum subsp. aquilinum chloroplast
AP004447.1	2	20050416	181466	Pterocaesio tile mitochondrion
AF338709.2	4	20050527	8795	Pterocnemia pennata mitochondrion
AY158678.1	4	20061114	37064	Pterodroma brevirostris mitochondrion
DQ780882.1	4	20061220	390975	Pteroglossus azara flavirostris mitochondrion
AY687866.1	7	20081224	285953	Pteronarcys princeps mitochondrion
AB042770.1	3	20050414	126282	Pteropus dasymallus mitochondrion
AF321050.1	3	20050415	94117	Pteropus scapulatus mitochondrion
EU237488.1	2	20090113	479640	Ptilocaulis walpersi mitochondrion
AP009507.1	3	20091127	238220	Ptychochromoides katria mitochondrion
FJ752429.1	4	20100615	9061	Pucrasia macrolopha mitochondrion
EU332749.1	1	20101231	300318	Pungitius kaibarae mitochondrion
AB445130.1	2	20090113	134920	Pungitius pungitius mitochondrion
EU332748.1	1	20101231	497904	Pungitius sinensis mitochondrion
AB239598.1	2	20090215	90753	Pungtungia herzi mitochondrion
EU287909.1	1	20071205	27709	Puntius tetrazona mitochondrion
AB238969.1	2	20090215	205135	Puntius ticto mitochondrion
AB028237.1	4	20061114	96460	Pupa strigosa mitochondrion
AM181033.1	3	20070821	693431	Pusa caspica mitochondrion
AM181036.1	3	20070821	9718	Pusa hispida mitochondrion
AM181034.1	3	20070821	9719	Pusa sibirica mitochondrion
FJ493498.1	1	20090224	41880	Pycnococcus provasolii chloroplast
GQ497137.1	2	20100315	41880	Pycnococcus provasolii mitochondrion
GU475148.1	1	20100305	125283	Pycnonotus sinensis mitochondrion
FJ378536.2	2	20100118	493818	Pycnonotus taivanus mitochondrion
FJ809754.1	1	20091223	96932	Pyganodon grandis mitochondrion
DQ355302.1	1	20060624	54133	Pygathrix nemaeus mitochondrion
AJ277126.1	4	20061114	2885	Pylaiella littoralis mitochondrion
AY345054.2	7	20090414	252582	Pyramidella dolabrata mitochondrion
FJ493499.1	1	20090224	36894	Pyramimonas parkeae chloroplast
AF452048.1	5	20061114	71223	Pyrocoelia rufa mitochondrion
EF398270.1	2	20080331	423334	Pyrophorus divergens mitochondrion
GU138662.1	3	20101015	65071	Pythium ultimum mitochondrion
GU138663.1	1	20100930	65071	Pythium ultimum culture-collection CBS:398.51 mitochondrion
AB177878.1	3	20080924	51751	Python regius mitochondrion
DQ659152.1	2	20080829	74932	Pyxidea mouhotii mitochondrion
FJ809750.1	1	20091223	52372	Quadrula quadrula mitochondrion
FJ432700.1	2	20090929	109965	Quasipaa spinosa mitochondrion
FJ154956.1	1	20080910	141264	Rachycentron canadum mitochondrion
FN313571.1	5	20110120	46012	Radopholus similis mitochondrion
FJ611801.1	1	20100907	590134	Radoszkowskius oculata mitochondrion
AP010780.1	2	20110302	516811	Raiamas senegalensis mitochondrion
AP010822.1	2	20100421	547198	Rallina eurizonoides sepiaria mitochondrion
DQ343649.1	2	20081229	51846	Ramphotyphlops braminus mitochondrion
FJ156750.1	1	20090831	556494	Ramulus hainanense mitochondrion
AB477463.1	2	20110114	590987	Ramulus irregulariterdentatus mitochondrion
AB511282.1	1	20100713	310659	Rana ishikawae mitochondrion
AB043889.1	7	20061114	8409	Rana nigromaculata mitochondrion
EF196679.1	1	20070330	109178	Rana plancyi mitochondrion
AB245426.1	2	20091114	9870	Rangifer tarandus mitochondrion
AJ419960.1	4	20061114	113097	Ranodon sibiricus mitochondrion
DQ359689.1	4	20090311	334596	Ranunculus macranthus chloroplast
AP006047.1	2	20060531	215407	Ranzania laevis mitochondrion
EU170053.1	1	20080831	55521	Rapana venosa mitochondrion
EU555283.1	2	20100407	334878	Rastrelliger brachysoma mitochondrion
EU273709.1	2	20100509	34854	Rattus exulans isolate RPNGYur 9Oct06 mitochondrion
EU273710.1	2	20100509	34854	Rattus exulans mitochondrion
GU570664.1	4	20110217	10119	Rattus fuscipes mitochondrion
GU570659.1	4	20110217	10115	Rattus leucopus mitochondrion
GU570661.1	4	20110217	472760	Rattus lutreolus mitochondrion
X14848.1	72	20050418	10116	Rattus norvegicus mitochondrion strain wistar
EU273708.1	2	20100509	349711	Rattus praetor mitochondrion
EU273707.1	2	20100509	10117	Rattus rattus mitochondrion
GU570665.1	4	20110217	10120	Rattus sordidus mitochondrion
EU273712.1	2	20100509	35732	Rattus tanezumi mitochondrion
GU570662.1	4	20110217	10121	Rattus tunneyi mitochondrion
GU570663.1	4	20110217	10122	Rattus villosissimus mitochondrion
AF007261.1	12	20061114	48483	Reclinomonas americana mitochondrion
AM749130.1	1	20070723	111784	Reinhardtius hippoglossoides mitochondrion
AB079597.1	5	20100128	711330	Rena humilis mitochondrion
EF206314.1	1	20070529	36989	Reticulitermes flavipes mitochondrion
EF206320.1	1	20070529	93199	Reticulitermes hageni mitochondrion
EF206315.1	2	20101013	127387	Reticulitermes santonensis mitochondrion
EF206318.1	1	20070529	57123	Reticulitermes virginicus mitochondrion
AP004108.1	4	20061114	170203	Retropinna retropinna mitochondrion
AB202078.1	3	20061114	210202	Rhacophorus schlegelii
DQ888607.1	1	20070406	398797	Rhagophthalmus lufengensis mitochondrion
AB267275.1	1	20070414	71225	Rhagophthalmus ohbai mitochondrion
Y16884.3	7	20050418	8797	Rhea americana mitochondrion
AY456252.1	3	20081216	194408	Rhinatrema bivittatum mitochondrion
AP009210.1	1	20090110	245705	Rhinecanthus aculeatus mitochondrion
AY605473.1	1	20040829	261503	Rhineura floridana mitochondrion voucher MVZ 233342
FJ905815.1	2	20090517	102233	Rhinoceros sondaicus mitochondrion
X97336.1	8	20050418	9809	Rhinoceros unicornis mitochondrion
HM147141.1	2	20101021	134994	Rhinochimaera pacifica mitochondrion
EU166918.1	1	20080930	472238	Rhinolophus formosae mitochondrion
AF406806.1	4	20050415	169756	Rhinolophus monoceros mitochondrion
AB061526.1	2	20050414	159859	Rhinolophus pumilus mitochondrion
AP010844.1	2	20101229	391222	Rhinomuraena quaesita mitochondrion
DQ355300.1	3	20061114	61622	Rhinopithecus roxellana mitochondrion
AF081829.1	2	20050415	34632	Rhipicephalus sanguineus mitochondrion
GQ413967.1	2	20110204	112168	Rhizanthella gardneri plastid
AF404306.1	6	20061114	60187	Rhizophydium sp. 136 mitochondrion
AY863212.1	3	20061114	64495	Rhizopus oryzae mitochondrion
DQ640647.1	3	20061114	386104	Rhodactis sp. CASIZ 171755 mitochondrion
DQ026430.1	1	20080906	75330	Rhodeus ocellatus mitochondrion
AB070205.1	2	20090215	80800	Rhodeus ocellatus kurumeus mitochondrion
EF483934.1	1	20091231	112179	Rhodeus suigensis mitochondrion
DQ155662.1	2	20070125	339858	Rhodeus uyekii mitochondrion
AF288090.1	4	20061114	52970	Rhodomonas salina mitochondrion
EF508371.1	1	20070617	52970	Rhodomonas salina strain CCMP1319 chloroplast
FJ859903.1	3	20091027	272071	Rhopaea magnicornis mitochondrion
GQ387649.1	3	20090925	608481	Rhopalomyia pomum mitochondrion
AP004454.1	2	20050416	86220	Rhyacichthys aspro mitochondrion
AY728219.1	2	20040922	291264	Rhyacotriton variegatus mitochondrion
AB282853.1	1	20100218	412649	Rhynchactis macrothrix mitochondrion
AJ508399.1	5	20061121	33559	Rhyncholestes raphanurus mitochondrion
AP011064.1	1	20090822	270585	Rhynchopelates oxyrhynchus mitochondrion
EF532933.1	2	20080326	54386	Rhynochetos jubatus mitochondrion
HQ874649.1	1	20110213	3988	Ricinus communis mitochondrion
DQ640648.1	3	20061114	165100	Ricordea florida mitochondrion
EU427344.1	1	20081224	329032	Riptortus pedestris mitochondrion
AP010846.1	2	20101229	118149	Robinsia catherinae mitochondrion
AY083457.1	6	20061114	189538	Roboastra europaea mitochondrion
EF154459.1	2	20061212	13658	Romanomermis culicivorax mitochondrion
EF175764.1	1	20061219	416168	Romanomermis iyengari mitochondrion
EF175763.1	1	20061219	416167	Romanomermis nielseni mitochondrion
AP002937.1	2	20050416	88713	Rondeletia loricata mitochondrion
GQ304898.1	1	20091129	231624	Rotaria rotatoria mitochondrion
AB205183.1	2	20071005	9407	Rousettus aegyptiacus mitochondrion
AP009227.1	1	20090110	392931	Rudarius ercodes mitochondrion
FJ493469.1	1	20090113	587370	Rudbeckia flower distortion virus isolate
FJ207538.1	1	20090428	72545	Rupicapra pyrenaica mitochondrion
FJ207539.1	1	20090428	34869	Rupicapra rupicapra mitochondrion
DQ989636.3	3	20080926	399782	Rusa unicolor swinhoei mitochondrion
EF583824.1	2	20071005	441267	Ruspolia dubia mitochondrion
EF088646.1	2	20090107	74934	Sacalia quadriocellata mitochondrion
AP011498.1	1	20091104	88154	Saccharina angustata mitochondrion
AP011499.1	1	20091104	416835	Saccharina coriacea mitochondrion
AP011496.1	1	20091104	416837	Saccharina diabolica mitochondrion
AP011493.1	1	20091104	88149	Saccharina japonica mitochondrion
AP011497.1	1	20091104	416839	Saccharina longipedalis mitochondrion
AP011495.1	1	20091104	416842	Saccharina ochotensis mitochondrion
AP011494.1	1	20091104	88150	Saccharina religiosa mitochondrion
AJ011856.1	8	20090630	4932	Saccharomyces cerevisiae mitochondrion
EU004203.1	2	20070805	307796	Saccharomyces cerevisiae YJM789 mitochondrion
EU852811.1	1	20090306	520522	Saccharomyces pastorianus Weihenstephan 34/70 mitochondrion
AJ430679.1	3	20061114	27293	Saccharomyces servazzii mitochondrion
AP006714.1	4	20100210	717233	Saccharum hybrid cultivar NCo 310 chloroplast
AE009947.2	6	20100308	193079	Saccharum hybrid cultivar SP80-3280 chloroplast
AY336131.1	2	20061114	10224	Saccoglossus kowalevskii mitochondrion
AB047825.1	4	20101229	136490	Saccopharynx lavenbergi mitochondrion
FJ841968.1	1	20100401	157729	Saccostrea mordax mitochondrion
AP009495.1	1	20080620	319782	Sagamichthys abei mitochondrion
AP011547.1	1	20100205	52900	Sagitta enflata mitochondrion
AB371091.1	1	20090603	9521	Saimiri sciureus mitochondrion
DQ333814.1	1	20060511	288315	Salamandrella keyserlingii mitochondrion
AP004109.1	4	20061114	137522	Salangichthys microdon mitochondrion
AP006231.1	4	20050827	221867	Salanx ariakensis mitochondrion
AP004451.1	2	20050416	181472	Salarias fasciatus mitochondrion
EU427345.1	1	20081224	498931	Saldula arsenjevi mitochondrion
U12143.1	10	20061114	8030	Salmo salar mitochondrion
AM910409.1	3	20071201	227976	Salmo trutta trutta mitochondrion
AF154851.1	6	20061114	8036	Salvelinus alpinus mitochondrion
AF154850.1	6	20061114	8038	Salvelinus fontinalis mitochondrion
AY534144.1	4	20061114	4770	Saprolegnia ferax strain ATCC 36051 mitochondrion
AB054124.1	5	20090215	149978	Sarcocheilichthys variegatus microoculus mitochondrion
AP009233.1	1	20070612	27697	Sardina pilchardus mitochondrion
AP009143.1	1	20070612	196072	Sardinella maderensis mitochondrion
AB032554.1	4	20101229	41697	Sardinops melanostictus mitochondrion
AP004432.1	2	20050416	181438	Sargocentron rubrum mitochondrion
AP011824.1	1	20100603	461137	Sasakia charonda mitochondrion
AP011825.1	1	20100603	765311	Sasakia charonda kuriyamaensis mitochondrion
EF622227.1	2	20080422	37777	Saturnia boisduvalii mitochondrion
AP002920.1	2	20050416	143315	Saurida undosquamis mitochondrion
DQ825686.1	1	20070127	328566	Savalia savaglia mitochondrion
AP004441.1	2	20050416	181455	Scalicus amiscus mitochondrion
AP004354.1	3	20101229	178880	Scaphirhynchus cf. albus mitochondrion
FJ619271.1	1	20090123	242802	Scarus forsteni mitochondrion
FJ449707.1	1	20081229	242806	Scarus ghobban mitochondrion
FJ227899.1	1	20081005	247628	Scarus rubroviolaceus mitochondrion
FJ595020.1	1	20090113	247629	Scarus schlegeli mitochondrion
AB079242.1	4	20080924	8519	Sceloporus occidentalis mitochondrion
X17375.2	12	20061114	3088	Scenedesmus obliquus mitochondrion
DQ396875.1	4	20081126	3088	Scenedesmus obliquus strain UTEX 393 chloroplast
AF204057.1	5	20061114	3088	Scenedesmus obliquus strain UTEX 78 mitochondrion
GQ491031.1	2	20100121	670319	Schistocerca gregaria gregaria mitochondrion
DQ157222.2	2	20060528	6185	Schistosoma haematobium mitochondrion
AF215860.1	4	20050415	6182	Schistosoma japonicum mitochondrion coding region
AF216698.1	3	20050415	6183	Schistosoma mansoni mitochondrion
AF217449.1	5	20050415	38744	Schistosoma mekongi mitochondrion
DQ157223.1	1	20060509	6189	Schistosoma spindale mitochondrion
AB242172.1	2	20090215	357288	Schistura balteata mitochondrion
AY531391.1	3	20061114	13262	Schizaphis graminum mitochondrion
AF402141.1	7	20061114	5334	Schizophyllum commune mitochondrion
AF547983.1	6	20061114	4897	Schizosaccharomyces japonicus mitochondrion
AF275271.2	14	20090123	4899	Schizosaccharomyces octosporus mitochondrion
X54421.1	15	20061114	4896	Schizosaccharomyces pombe mitochondrion
AJ238588.1	3	20061114	55149	Sciurus vulgaris mitochondrion
DQ023143.1	3	20070321	113540	Scleropages formosus mitochondrion
DQ241798.1	3	20061114	253126	Sclerophasma paresisense mitochondrion
AP009228.1	1	20090110	392933	Scobinichthys granulatus mitochondrion
AY456253.1	5	20081224	261001	Scolecomorphus vittatus mitochondrion
AB488407.1	2	20100128	29150	Scomber australasicus mitochondrion
AB488406.1	2	20100128	338315	Scomber colias mitochondrion
AB488405.1	2	20100128	13676	Scomber japonicus mitochondrion
AB120717.1	5	20071205	13677	Scomber scombrus mitochondrion
DQ536428.1	2	20060719	13679	Scomberomorus cavalla mitochondrion
AP002934.1	2	20050416	143333	Scopelogadus mizolepis mitochondrion
EU419747.1	1	20090830	52904	Scophthalmus maximus mitochondrion
AP011063.1	1	20090822	163141	Scorpis lineolata mitochondrion
AJ507061.2	3	20050415	29022	Scutigera coleoptrata mitochondrion
DQ666065.1	2	20070922	388540	Scutigerella causeyae mitochondrion
Y16067.1	3	20050418	7830	Scyliorhinus canicula mitochondrion
FJ827760.1	1	20090331	85551	Scylla olivacea mitochondrion
FJ827761.1	1	20090331	85552	Scylla paramamosain mitochondrion
FJ827758.1	1	20090331	6761	Scylla serrata mitochondrion
FJ827759.1	1	20090331	85553	Scylla tranquebarica mitochondrion
AY491978.1	4	20070523	214486	Sebastes schlegelii mitochondrion
GU452728.1	1	20100202	41446	Sebastiscus marmoratus mitochondrion
FJ755183.1	2	20091023	88036	Selaginella moellendorffii plastid
AB197035.2	6	20070420	307165	Selaginella uncinata chloroplast
DQ355297.1	2	20061114	88029	Semnopithecus entellus mitochondrion
AB266516.1	2	20070724	31210	Sepia esculenta mitochondrion
AB240155.1	2	20061114	6610	Sepia officinalis mitochondrion
AB240154.1	2	20061114	34570	Sepioteuthis lessoniana mitochondrion
EF633601.2	2	20080318	446912	Seriatopora caliendrum mitochondrion
EF633600.2	2	20080318	51070	Seriatopora hystrix mitochondrion
AP010857.1	2	20101229	182440	Serrivomer beanii mitochondrion
AP007250.1	3	20110119	290102	Serrivomer sector mitochondrion
GU138699.1	1	20100624	48799	Setaria digitata mitochondrion
HQ008865.1	1	20100907	52224	Shinisaurus crocodilurus mitochondrion
EU420129.1	1	20080619	480484	Shinkaia crosnieri mitochondrion
FJ859905.1	3	20091027	173823	Sialis hamata mitochondrion
EU728583.1	3	20100421	211651	Sibon nebulatus mitochondrion
DQ643838.1	3	20071128	214988	Siderastrea radians mitochondrion
EF025185.1	1	20070606	225757	Siganus fuscescens mitochondrion
AP006031.1	1	20090822	215396	Siganus unimaculatus mitochondrion
AB016274.1	7	20100826	48457	Sigmops gracilis mitochondrion
HM562727.1	3	20101216	37657	Silene latifolia mitochondrion
AM398435.2	38	20100616	94993	Silurus glanis mitochondrion
HM746661.1	1	20110102	175797	Silurus meridionalis mitochondrion
AP010849.1	3	20110119	189493	Simenchelys parasitica mitochondrion
DQ866050.1	1	20070104	290412	Simosyrphus grandicornis mitochondrion
FJ984568.1	2	20100702	304914	Sinocyclocheilus altishoulderus mitochondrion
GQ148557.1	2	20100702	75366	Sinocyclocheilus grahami mitochondrion
FJ605359.1	1	20090123	241472	Sinogastromyzon puliensis mitochondrion
EU880278.1	1	20080722	98310	Sinonovacula constricta mitochondrion
FJ606783.1	1	20091231	590132	Siphlonurus immanis mitochondrion
HQ875717.1	1	20110213	981053	Siphluriscus chinensis mitochondrion
AY345049.2	6	20090414	57642	Siphonaria pectinata mitochondrion
AY342055.1	2	20050416	203167	Siphonodentalium lobatum mitochondrion
AY954506.1	2	20061114	320579	Siphonops annulatus mitochondrion
FJ422961.1	2	20090130	6446	Sipunculus nudus mitochondrion
FJ360694.1	2	20100813	568780	Sivaloka damnosus mitochondrion
AB282827.1	1	20100218	412661	Sladenia gardineri mitochondrion
AB079613.1	5	20100920	885424	Smaug warreni mitochondrion
HM536959.1	1	20110128	49657	Smilax china plastid
AY795974.1	2	20060302	9301	Sminthopsis crassicaudata mitochondrion
AJ639867.1	4	20061121	90758	Sminthopsis douglasi mitochondrion (partial)
EU016192.1	1	20080331	109609	Sminthurus viridis mitochondrion
AF090340.1	5	20050415	81930	Smithornis sharpei mitochondrion
AY863213.1	3	20061114	4889	Smittium culisetae mitochondrion
DQ347958.1	2	20061114	147425	Solanum bulbocastanum cultivar PT29 chloroplast
AM087200.3	6	20070626	4081	Solanum lycopersicum chloroplast
DQ347959.1	2	20061114	4081	Solanum lycopersicum cultivar LA3023 chloroplast
DQ386163.2	4	20091027	4113	Solanum tuberosum cultivar Desiree chloroplast
DQ231562.1	5	20070110	4113	Solanum tuberosum chloroplast
AB270760.1	3	20070424	28829	Solea senegalensis mitochondrion
HQ215537.1	1	20101031	121131	Solenopsis geminata mitochondrion
HQ215538.1	1	20101031	13686	Solenopsis invicta mitochondrion
HQ215539.1	1	20101031	30203	Solenopsis richteri mitochondrion
AB277725.1	2	20080116	270527	Solenostomus cyanopterus mitochondrion
AB061527.1	2	20050414	62275	Sorex unguiculatus mitochondrion
DQ984518.1	4	20061212	4558	Sorghum bicolor mitochondrion
EF115542.1	1	20061208	4558	Sorghum bicolor cultivar BTx623 chloroplast
EU557091.1	1	20090203	103600	Sousa chinensis mitochondrion
AY545549.1	2	20050416	52888	Spadella cephaloptera mitochondrion
FJ387020.1	1	20100627	314331	Spathius agrili mitochondrion
AY456190.1	4	20061114	84346	Speleonectes tulumensis mitochondrion
EU877950.1	2	20081031	546487	Sphaerius sp. BT0074 mitochondrion
AF534390.1	4	20050415	8508	Sphenodon punctatus mitochondrion
GU176342.1	1	20100713	696090	Sphenophorus sp. BYU-CO246 mitochondrion
AP006745.1	3	20090227	229059	Sphoeroides pachygaster mitochondrion
AP009164.1	2	20070920	98823	Spicara maena mitochondrion
AM711898.1	4	20080403	30552	Spilogale putorius mitochondrion
HM204705.1	2	20101205	768146	Spilonota lechriaspis mitochondrion
AB445128.1	2	20090113	206126	Spinachia spinachia mitochondrion
AJ400848.1	10	20061114	3562	Spinacia oleracea chloroplast
AB374543.1	2	20081214	99802	Spirometra erinaceieuropaei mitochondrion
AF404303.1	6	20061114	109760	Spizellomyces punctatus mitochondrial chromosome 1
AF404304.1	3	20060228	109760	Spizellomyces punctatus mitochondrial chromosome 2
AF404305.1	3	20060228	109760	Spizellomyces punctatus mitochondrial chromosome 3
AP009144.1	1	20070612	373251	Spratelloides delicatulus mitochondrion
AP009145.1	1	20070612	365052	Spratelloides gracilis mitochondrion
AP009234.1	1	20070612	196075	Sprattus sprattus mitochondrion
Y18134.1	2	20050418	7797	Squalus acanthias mitochondrion
DQ191684.1	1	20050921	84350	Squilla empusa mitochondrion
AY639936.1	3	20060829	280675	Squilla mantis mitochondrion
AY958085.1	4	20081216	102822	Staurastrum punctulatum chloroplast
EU935607.1	3	20081224	52000	Steganacarus magnus mitochondrion
AY591323.1	4	20060309	34508	Steinernema carpocapsae mitochondrion
EF195384.1	2	20081229	436911	Steller sea lion vesivirus
AP010858.1	2	20101229	87100	Stemonidium hypomelas mitochondrion
EU557096.1	1	20090203	9735	Stenella attenuata mitochondrion
EU557097.1	1	20090203	9737	Stenella coeruleoalba mitochondrion
AP002952.1	2	20050416	143348	Stephanolepis cirrhifer mitochondrion
AY728212.1	2	20040922	291263	Stereochilus marginatus mitochondrion
EU660576.1	4	20101130	34553	Sthenoteuthis oualaniensis mitochondrion
HQ000092.1	2	20101104	566292	Stichopus horrens mitochondrion
HM853683.2	2	20110227	871532	Stichopus sp. SF-2010 mitochondrion
EU826088.1	1	20090630	319428	Stictopleurus subviridis mitochondrion
DQ630521.1	5	20081126	55999	Stigeoclonium helveticum strain UTEX 441 chloroplast
AP011583.1	1	20110111	687780	Stomatorhinus sp. CU 6164 mitochondrial DNA
DQ520859.1	1	20060513	382540	Strelkovimermis spiculatus haplotype large mitochondrion
DQ520860.1	1	20060513	382540	Strelkovimermis spiculatus haplotype small mitochondrion
AY309456.1	4	20050416	57251	Strigops habroptilus mitochondrion
AM900391.1	2	20071108	7671	Strongylocentrotus droebachiensis mitochondrion
AM900392.1	2	20071108	7670	Strongylocentrotus pallidus mitochondrion
X12631.1	74	20050418	7668	Strongylocentrotus purpuratus mitochondrion
AJ558163.1	2	20061114	6248	Strongyloides stercoralis mitochondrion
GQ888717.2	2	20100421	40348	Strongylus vulgaris mitochondrion
AF338715.1	4	20050527	8801	Struthio camelus mitochondrion
HQ896037.1	1	20110313	36269	Sturnus cineraceus mitochondrion
HM859900.1	1	20100816	451428	Sturnus sericeus mitochondrion
HQ915864.1	1	20110302	279927	Sturnus tristis mitochondrion
AM292601.1	1	20091127	7726	Styela plicata mitochondrion
GQ927176.2	3	20100325	679428	Stylochyrus rarior mitochondrion
EU400214.1	1	20080824	50429	Stylophora pistillata mitochondrion
AM690374.1	1	20080320	55567	Suberites domuncula mitochondrion
AP004456.1	3	20100826	181478	Sufflamen fraenatum mitochondrion
AP006232.1	3	20050826	221869	Sundasalanx mekongensis mitochondrion
AJ002189.1	7	20090630	9823	Sus scrofa mitochondrion
AP003428.1	1	20090224	9825	Sus scrofa domesticus mitochondrion
GU147934.1	1	20101102	310261	Sus scrofa taiwanensis mitochondrion
AM889140.1	2	20080221	48155	Sylvia atricapilla mitochondrion
AM889141.1	2	20080221	216226	Sylvia crassirostris mitochondrion
AB504750.1	1	20100407	9590	Symphalangus syndactylus mitochondrion
EF576853.1	1	20081216	390856	Symphylella sp. YG-2006 mitochondrion
HM237350.1	1	20101015	84072	Symsagittifera roscoffensis mitochondrion
AP002977.2	4	20101229	118154	Synaphobranchus kaupii mitochondrion
GU002153.1	2	20100527	191585	Synedra acus mitochondrion
GQ888718.1	2	20101124	70241	Syngamus trachea mitochondrion
AY524977.1	1	20050731	261076	Synodus variegatus mitochondrion
AP009042.1	2	20061114	28708	Synthliboramphus antiquus mitochondrion
FJ546412.1	2	20100317	38588	Syntrichia ruralis chloroplast
AB164624.1	1	20080401	9063	Syrmaticus ellioti mitochondrion
AB164625.1	1	20080401	9064	Syrmaticus humiae mitochondrion
AB164623.1	1	20080401	9066	Syrmaticus reevesii mitochondrion
AB164622.1	1	20080401	265498	Syrmaticus soemmerringi ijimae mitochondrion
EF532936.1	2	20080326	342690	Tachybaptus novaehollandiae mitochondrion
AJ303116.1	7	20061114	9261	Tachyglossus aculeatus mitochondrion
FJ860267.1	1	20090413	6853	Tachypleus tridentatus mitochondrion
AF445798.2	5	20060519	60517	Taenia asiatica mitochondrion
AF216699.1	2	20010118	6207	Taenia crassiceps mitochondrion
GQ228819.1	2	20100816	85431	Taenia hydatigena mitochondrion
GQ228818.1	2	20100816	94034	Taenia multiceps mitochondrion
GU569096.1	2	20100816	85432	Taenia pisiformis mitochondrion
AY684274.1	1	20071029	6206	Taenia saginata mitochondrion
AB086256.1	3	20061114	6204	Taenia solium mitochondrion
FJ597547.1	1	20101208	6205	Taenia taeniaeformis mitochondrion
DQ422742.1	2	20061123	59729	Taeniopygia guttata mitochondrion
AP009534.1	2	20090227	176185	Takifugu chinensis mitochondrion
AP009525.1	2	20090227	478957	Takifugu chrysops mitochondrion
AP009540.1	2	20090227	277992	Takifugu exascurus mitochondrion
GQ409967.1	1	20090810	301270	Takifugu fasciatus mitochondrion
AP009526.1	2	20090227	204815	Takifugu niphobles mitochondrion
AP009535.1	2	20090227	204816	Takifugu oblongus mitochondrion
AP009527.1	2	20090227	309541	Takifugu obscurus mitochondrion
AP009536.1	2	20090227	433686	Takifugu ocellatus mitochondrion
AP009528.1	2	20090227	98921	Takifugu pardalis mitochondrion
AP009539.1	2	20090227	176188	Takifugu poecilonotus mitochondrion
AP009529.1	2	20090227	176187	Takifugu porphyreus mitochondrion
AJ421455.1	3	20061114	31033	Takifugu rubripes mitochondrion
AP009531.1	2	20090227	277993	Takifugu snyderi mitochondrion
AP009530.1	2	20090227	229060	Takifugu stictonotus mitochondrion
AP009532.1	2	20090227	177060	Takifugu vermicularis mitochondrion
AP009533.1	2	20090227	119041	Takifugu xanthopterus mitochondrion
AB080237.1	2	20080924	118850	Takydromus tachydromoides mitochondrion
AP009587.1	1	20091130	492049	Talismania bifurcata mitochondrion
Y19192.1	5	20061114	9375	Talpa europaea mitochondrion
AJ421450.1	4	20061114	48850	Tamandua tetradactyla mitochondrion
DQ241797.1	2	20061114	267124	Tamolanica tamolana mitochondrion
GU370074.1	2	20100908	88027	Tanystylum orbiculare mitochondrion
EU443255.1	1	20081216	8569	Tarentola mauritanica mitochondrion
AJ639868.1	3	20061114	38632	Tarsipes rostratus mitochondrion (partial)
AF348159.1	4	20061114	9477	Tarsius bancanus mitochondrion
AB371090.1	1	20090603	9478	Tarsius syrichta mitochondrion
HM563681.1	1	20100802	202796	Teinopalpus aureus mitochondrion
GQ888720.1	1	20100213	45464	Teladorsagia circumcincta mitochondrion
EU557269.1	2	20090107	62746	Teleogryllus emma mitochondrion
AY753545.1	3	20050528	293957	Teratoscincus keyserlingii voucher MVZ 243455 mitochondrion
EU236701.1	1	20080619	36115	Terebellides stroemi mitochondrion
EU827196.1	1	20090918	543399	Terebra dimidiata mitochondrion
AF331161.1	3	20050415	34513	Terebratalia transversa mitochondrion
AJ245743.1	5	20061114	7580	Terebratulina retusa mitochondrion
DQ080049.1	2	20060316	86975	Testudo graeca voucher MVZ 235707 mitochondrion
DQ080050.1	1	20051219	86975	Testudo graeca voucher CAS 218245 mitochondrion
DQ080045.1	2	20060211	101699	Testudo horsfieldii voucher CAS 184468 mitochondrion
DQ080048.1	2	20060210	101700	Testudo kleinmanni voucher MVZ 230361 mitochondrion
DQ080047.1	3	20060211	101701	Testudo marginata voucher MVZ 247484 mitochondrion
AY320033.1	6	20081118	233783	Tethya actinia mitochondrion
AB282831.1	1	20100218	242972	Tetrabrachium ocellatum mitochondrion
AB126701.1	3	20061114	240496	Tetraclita japonica mitochondrion
DQ927303.1	6	20081126	5901	Tetrahymena malaccensis strain MP75 mitochondrion
DQ927304.1	6	20081126	5905	Tetrahymena paravorax strain RP mitochondrion
DQ927305.1	6	20081126	5907	Tetrahymena pigmentosa mitochondrion
AF160864.1	8	20061212	5908	Tetrahymena pyriformis mitochondrion
AF396436.1	5	20061114	5911	Tetrahymena thermophila mitochondrion
AY521262.2	5	20061114	267835	Tetraleurodes acaciae mitochondrion
HM753535.1	1	20100804	93129	Tetranychus cinnabarinus mitochondrion
EU345430.1	3	20080501	32264	Tetranychus urticae mitochondrion
DQ019313.1	2	20070120	99883	Tetraodon nigroviridis mitochondrion
FJ799728.1	1	20100301	459760	Tetraophasis szechenyii mitochondrion
EU877953.1	2	20081031	546504	Tetraphalerus bruchi mitochondrion
AB470303.1	1	20090508	13720	Tetrapturus angustirostris mitochondrion
AB470302.1	1	20090508	13721	Tetrapturus audax mitochondrion
AF272824.1	5	20061114	48717	Tetrodontophora bielanensis mitochondrion
DQ159954.1	1	20071201	272940	Thais clavigera mitochondrion
AY158677.2	7	20080423	54026	Thalassarche melanophrys mitochondrion
AP010867.1	2	20101229	556248	Thalassenchelys sp. Tht2 mitochondrion
GU323224.1	2	20110117	637379	Thalassiosira oceanica CCMP1005 chloroplast
DQ186202.1	3	20061114	35128	Thalassiosira pseudonana mitochondrion
EF067921.1	3	20070823	35128	Thalassiosira pseudonana chloroplast
AP009185.1	1	20081001	325629	Thamnaconus modestus mitochondrion
DQ520857.1	1	20060513	382538	Thaumamermis cosgrovei mitochondrion
AB282847.1	1	20100218	412642	Thaumatichthys pagidostomus mitochondrion
CR940346.1	4	20050731	5874	Theileria annulata mitochondrion
Z23263.1	10	20061114	5875	Theileria parva mitochondrion
HQ336404.1	2	20110210	3641	Theobroma cacao chloroplast
AB094061.1	3	20050414	48550	Theragra chalcogramma mitochondrion
AM489718.1	2	20090223	421885	Theragra finnmarchica mitochondrion
AY639935.1	3	20060829	89055	Thermobia domestica mitochondrion
GQ166168.1	2	20100311	576855	Thermophis zhaoermii mitochondrion
FJ785426.1	1	20090422	9565	Theropithecus gelada mitochondrion
AY728224.1	2	20040922	291261	Thorius n. sp. RLM-2004 mitochondrion
GQ358927.1	1	20090816	100858	Threskiornis aethiopicus mitochondrion
GU181288.1	1	20101018	460824	Thrinchus schrenkii mitochondrion
AF335993.2	11	20061114	159957	Thrips imaginis mitochondrion
AJ301644.1	4	20061114	10169	Thryonomys swinderianus mitochondrion
AP009616.1	1	20100627	501720	Thryssa baelama mitochondrion
AB101291.1	2	20050414	8235	Thunnus alalunga mitochondrion
GU256528.1	2	20100509	8236	Thunnus albacares mitochondrion
GU256523.1	2	20100509	8240	Thunnus maccoyii mitochondrion
GU256525.1	2	20100509	8241	Thunnus obesus mitochondrion
AB185022.1	4	20071205	8238	Thunnus orientalis mitochondrion
GU256522.1	1	20100421	8237	Thunnus thynnus mitochondrion
AY302574.2	4	20060719	8242	Thunnus thynnus thynnus mitochondrion
FJ515780.1	2	20090211	9275	Thylacinus cynocephalus mitochondrion
HM174255.1	1	20101004	766170	Thylacodes squamigerus mitochondrion
AJ508401.2	6	20061114	191871	Thylamys elegans partial mitochondrion
FJ872559.1	2	20100308	70285	Thymallus arcticus mitochondrion
FJ853655.1	2	20100308	36185	Thymallus thymallus mitochondrion
AY055728.1	4	20061114	174155	Thyropygus sp. DVL-2001 mitochondrion
DQ913891.2	3	20090222	6832	Tigriopus californicus mitochondrion
AB060648.1	6	20091023	158387	Tigriopus japonicus mitochondrion
DQ993184.1	1	20071001	43049	Tilletia indica mitochondrion
EF536375.1	2	20081031	117179	Tilletia walkeri strain TJ23 mitochondrion
AF338707.3	5	20050527	30468	Tinamus major mitochondrion
AB218686.1	2	20090215	27717	Tinca tinca mitochondrion
AB158364.1	6	20061114	6637	Todarodes pacificus mitochondrion
EU410489.1	2	20090115	497867	Todiramphus sanctus vagans mitochondrion
AJ810455.1	5	20080722	184245	Tomistoma schlegelii partial mitochondrion
EU237482.1	2	20080221	281489	Topsentia ophiraphidites mitochondrion
AP009537.1	2	20090227	478964	Torquigener brevipennis mitochondrion
AF487277.1	4	20061114	264482	Torrubiella piperis mitochondrion
AM411108.1	2	20080617	6265	Toxocara canis mitochondrion
AM411622.1	2	20080617	6266	Toxocara cati mitochondrion
AM412316.1	2	20080617	321166	Toxocara malaysiensis mitochondrion
U87145.2	7	20101108	5811	Toxoplasma gondii chloroplast
AP006806.1	1	20090822	270537	Toxotes chatareus mitochondrion
EU090187.1	2	20080517	28494	Trachelium caeruleum chloroplast
FJ392294.1	1	20081110	34903	Trachemys scripta mitochondrion
AP002925.1	2	20050416	143894	Trachipterus trachypterus mitochondrion
AP003091.1	8	20100907	83875	Trachurus japonicus mitochondrion
AB108498.1	5	20071205	36212	Trachurus trachurus mitochondrion
EU877954.1	2	20081031	60840	Trachypachus holmbergi mitochondrion
AY863425.1	3	20050527	54181	Trachypithecus obscurus mitochondrion
GU187969.1	2	20101203	30407	Tragopan caboti mitochondrion
FJ752427.1	4	20100615	9071	Tragopan temminckii mitochondrion
GU723273.1	3	20100615	575983	Trametes cingulata mitochondrion
EU914849.1	1	20091231	227627	Traulia szetschuanensis mitochondrion
EF196665.1	1	20071101	9638	Tremarctos ornatus mitochondrion
AP009172.1	2	20070920	245701	Triacanthodes anomalus mitochondrion
AP009174.1	2	20070920	384595	Triacanthus biaculeatus mitochondrion
AY521265.2	5	20061114	88556	Trialeurodes vaporariorum mitochondrion
AF301594.1	5	20061114	72491	Triatoma dimidiata mitochondrion
AJ312413.2	4	20061114	7070	Tribolium castaneum mitochondrion
AB218896.1	2	20090215	264447	Tribolodon nakamurai mitochondrion
AM904728.1	2	20080818	9778	Trichechus manatus mitochondrion
AF293969.1	1	20010226	6334	Trichinella spiralis mitochondrion
EU339148.1	2	20090903	235211	Trichiurus japonicus mitochondrion
DQ859919.1	2	20080606	157069	Trichobilharzia regenti mitochondrion
AY191994.1	2	20050416	89825	Tricholepidion gertschi mitochondrion
DQ866051.1	1	20070104	395991	Trichophthalma punctata mitochondrion
FJ385027.1	1	20090618	523103	Trichophyton mentagrophytes mitochondrion
FJ385026.1	1	20090618	5551	Trichophyton rubrum mitochondrion
DQ112541.1	3	20081224	10228	Trichoplax adhaerens mitochondrion
GQ888719.1	1	20100213	40349	Trichostrongylus axei mitochondrion
GQ888711.1	1	20100213	40352	Trichostrongylus vitrinus mitochondrion
AF357238.1	5	20050527	9337	Trichosurus vulpecula mitochondrion
EU440735.1	1	20100202	227356	Tricula hortensis mitochondrion
EU849487.1	1	20081230	3900	Trifolium subterraneum chloroplast
EU016193.1	3	20081126	50637	Trigoniophthalmus alternatus mitochondrion
AB474916.1	1	20100601	179915	Trioceros melleri mitochondrion
AP009170.1	2	20070920	300227	Triodon macropterus mitochondrion
AB477345.1	2	20090717	101491	Trionyx triunguis mitochondrion
AB084514.1	2	20050414	194544	Triops cancriformis mitochondrion
AY639934.1	2	20060829	58777	Triops longicaudatus mitochondrion
GU949546.1	1	20100401	747041	Triploid Megalobrama amblycephala x Xenocypris davidi mitochondrion
DQ984517.1	4	20061212	4563	Tripsacum dactyloides cultivar Pete mitochondrion
AP008982.1	4	20061114	4565	Triticum aestivum mitochondrion
AB042240.3	12	20070823	4565	Triticum aestivum chloroplast
AP009173.1	2	20070920	245703	Trixiphichthys weberi mitochondrion
EU938374.1	1	20080930	552514	Troglophilus neglectus mitochondrion
EU410490.1	2	20090115	59419	Trogon viridis mitochondrion
EU625344.1	1	20101230	501369	Troides aeacus mitochondrion
AP006015.1	2	20081119	8148	Tropheus duboisi mitochondrion
FJ755181.1	2	20090618	51980	Tropidophis haetianus mitochondrion
GU176339.1	1	20100713	696091	Tropisternus sp. BYU-CO166 mitochondrion
M15323.1	6	20000304	5691	Trypanosoma brucei kinetoplast minicircle H39
M15324.1	6	20000304	5691	Trypanosoma brucei kinetoplast minicircle H40
M15321.1	6	20000304	5691	Trypanosoma brucei kinetoplast minicircle P1
M15322.1	6	20000304	5691	Trypanosoma brucei kinetoplast minicircle P2
DQ343645.1	3	20060504	5693	Trypanosoma cruzi strain CL Brener kinetoplast maxicircle
DQ343646.1	3	20060504	5693	Trypanosoma cruzi strain Esmeraldo kinetoplast maxicircle
EU031048.1	1	20090731	329627	Tscherskia triton mitochondrion
AF217811.1	3	20061114	37347	Tupaia belangeri mitochondrion
EU557092.1	1	20090203	79784	Tursiops aduncus mitochondrion
EU557093.1	1	20090203	9739	Tursiops truncatus mitochondrion
AP009509.1	3	20091127	32513	Tylochromis polylepis mitochondrion
GU195652.1	2	20100319	4733	Typha latifolia chloroplast
AF154051.1	2	20050415	8456	Typhlonectes natans mitochondrion
EU747730.1	1	20080608	534403	Typhlops reticulatus mitochondrion
EF551004.1	2	20090605	29064	Uncia uncia mitochondrion
EU856396.1	3	20100818	350889	Unionicola foili mitochondrion
HQ386015.1	1	20101031	350891	Unionicola parkeri mitochondrion
AY456254.1	4	20081216	262585	Uraeotyphlus cf. oxyurus MW-212 mitochondrion
AY619711.1	2	20050416	6431	Urechis caupo mitochondrion
EF656365.1	2	20090629	6432	Urechis unicinctus mitochondrion
EU523756.1	1	20080401	507508	Uroctonus mordax mitochondrion
AB114447.1	1	20100601	236742	Uromastyx benti mitochondrion
AB099483.1	3	20050414	106106	Urotrichus talpoides mitochondrion
AF303109.1	2	20050415	9643	Ursus americanus mitochondrion
AF303110.1	2	20050415	9644	Ursus arctos mitochondrion
AF303111.1	2	20050415	29073	Ursus maritimus mitochondrion
FM177760.1	1	20080731	39097	Ursus spelaeus mitochondrion
EF196661.1	1	20071101	9642	Ursus thibetanus mitochondrion
EF076773.1	1	20070402	411875	Ursus thibetanus formosanus mitochondrion
DQ402478.1	1	20070104	262110	Ursus thibetanus mupinensis mitochondrion
EF587265.1	1	20080531	441215	Ursus thibetanus thibetanus mitochondrion
EF681884.1	1	20080731	262111	Ursus thibetanus ussuricus mitochondrion
DQ157700.1	2	20061114	5270	Ustilago maydis mitochondrion
AM501482.1	2	20090130	126794	Vaccinia virus Ankara
EU237489.1	2	20080221	479641	Vaceletia sp. GW948 mitochondrion
AB242173.1	3	20090215	357290	Vaillantella maassi mitochondrion
FJ456952.1	1	20090618	575843	Valentia hoffmanni mitochondrion
AB266515.1	2	20070724	55288	Vampyroteuthis infernalis mitochondrion
DQ302100.1	2	20060915	32432	Vanhornia eucnemidarum mitochondrion
AB185327.1	2	20080924	62046	Varanus niloticus mitochondrion
EU747731.1	1	20080604	62051	Varanus salvator mitochondrion
AB371089.1	1	20090603	87289	Varecia variegata variegata mitochondrion
AB114300.1	5	20070915	6674	Vargula hilgendorfii mitochondrion
AJ493124.2	4	20090714	109461	Varroa destructor mitochondrion
EU912438.1	2	20081224	109269	Vaucheria litorea chloroplast
AB065375.1	2	20050414	129788	Venerupis philippinarum mitochondrion
AP008991.1	1	20060621	332670	Ventrifossa garmani mitochondrion
FJ809752.1	1	20091223	301928	Venustaconcha ellipsiformis mitochondrion
EF025506.1	3	20080531	98923	Verasper moseri mitochondrion
DQ403797.1	5	20080531	82366	Verasper variegatus mitochondrion
DQ351941.1	2	20061114	27337	Verticillium dahliae mitochondrion
X59266.1	13	20060630	3906	Vicia faba mitochondrial plasmid MtVFPL3
X05406.1	4	20100827	3906	Vicia faba mitochondrial plasmid 1
X05407.1	2	19950509	3906	Vicia faba mitochondrial plasmid 2
X05408.1	2	20100827	3906	Vicia faba mitochondrial plasmid 3
FJ456892.1	2	20100909	9843	Vicugna vicugna mitochondrion
AF090341.1	5	20050409	81927	Vidua chalybeata mitochondrion
GQ893027.1	1	20100205	157791	Vigna radiata chloroplast
HM367685.1	1	20110201	157791	Vigna radiata mitochondrion
FJ752492.1	1	20090303	604432	Viridovipera stejnegeri stejnegeri mitochondrion
DQ424856.1	2	20061114	29760	Vitis vinifera cultivar Maxxa chloroplast
FM179380.1	2	20090630	29760	Vitis vinifera mitochondrion
AJ304826.1	6	20061114	29139	Vombatus ursinus mitochondrion
AM181037.1	3	20070821	9627	Vulpes vulpes mitochondrion
AB300500.1	1	20080702	436352	Walchia hayashii mitochondrion
AB240152.1	3	20061114	6625	Watasenia scintillans mitochondrion
EU365892.2	7	20090515	193294	Watersipora subtorquata mitochondrion
EU342371.1	1	20080507	3377	Welwitschia mirabilis chloroplast
EU304459.1	1	20091130	486152	Whitmania pigra mitochondrion
AP009211.1	1	20090110	303701	Xanthichthys auromarginatus mitochondrion
DQ008215.1	1	20060525	330728	Xenagama taylori mitochondrion
AP009182.1	1	20081001	388625	Xenobalistes tumidipectoris mitochondrion
AP009059.1	1	20061211	70546	Xenocypris argentea mitochondrion
GQ289558.1	1	20090727	291826	Xenocypris davidi mitochondrion
EU727203.1	1	20091104	533011	Xenograpsus testudinatus mitochondrion
AP008927.1	2	20101229	112162	Xenomystus nigri mitochondrion
AB179620.1	4	20080924	196253	Xenopeltis unicolor mitochondrion
AB370891.1	1	20080827	123689	Xenopoecilus sarasinorum mitochondrion
AY789013.1	2	20050416	8364	Xenopus (Silurana) tropicalis mitochondrion
M10217.1	6	20061114	8355	Xenopus laevis mitochondrion
AP006777.1	1	20081016	28762	Xenotoca eiseni mitochondrion
DQ832701.1	3	20081119	242395	Xenoturbella bocki mitochondrion
EU237490.1	2	20080221	178552	Xestospongia muta mitochondrion
AB470301.1	1	20090508	8245	Xiphias gladius mitochondrion
AY382608.1	3	20070327	208518	Xiphinema americanum mitochondrion
FJ226476.1	1	20090810	8084	Xiphophorus hellerii mitochondrion
AP005982.1	1	20081016	8083	Xiphophorus maculatus mitochondrion
GU945503.1	1	20100908	747044	Xyleus modestus mitochondrion
EU265776.1	1	20071124	154827	Xyrauchen texanus mitochondrion
AJ307410.1	8	20101111	4952	Yarrowia lipolytica mitochondrion
EU427346.1	1	20081224	498953	Yemmalysus parallelus mitochondrion
AB218898.1	2	20090215	327405	Zacco sieboldii mitochondrion
AJ639865.1	5	20061121	33543	Zaglossus bruijni mitochondrion
AM181017.1	3	20070821	9704	Zalophus californianus mitochondrion
AP009162.1	2	20070920	75044	Zanclus cornutus mitochondrion
DQ645537.1	4	20061212	15945	Zea luxurians mitochondrion
X86563.2	35	20061114	4577	Zea mays chloroplast
M11163.1	9	20061114	4577	Zea mays 1.9 kb mitochondrial plasmid
AY506529.1	6	20061123	4577	Zea mays mitochondrion
AY928077.1	1	20060131	4577	Zea mays cultivar B73 chloroplast
DQ645536.1	6	20071101	381124	Zea mays subsp. mays mitochondrion
DQ645539.1	4	20061212	76912	Zea mays subsp. parviglumis mitochondrion
DQ645538.1	4	20061212	4580	Zea perennis mitochondrion
AP006032.1	1	20070920	175439	Zebrasoma flavescens mitochondrion
HM640211.1	1	20110302	115703	Zenaida auriculata mitochondrion
AP004434.1	2	20050416	181443	Zenion japonicum mitochondrion
AP002942.1	2	20050416	94939	Zenopsis nebulosus mitochondrion
AP002941.1	2	20050416	64108	Zeus faber mitochondrion
AP011545.1	1	20100205	648573	Zonosagitta nagae mitochondrion
AP002926.1	2	20050416	143325	Zu cristatus mitochondrion
AY958086.1	2	20061114	35869	Zygnema circumcarinatum chloroplast