Index of /users/BCH394P_364C_2023

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]1832HumanProteins.fasta2023-01-07 18:51 1.1M 
[TXT]1832HumanProteinsCFMS.txt2023-01-07 18:51 7.3M 
[TXT]1832HumanProteinsPhyloprofiles.txt2023-01-07 18:51 459K 
[ ]2019StateOfGeneAnnotation.pdf2023-02-14 10:31 306K 
[ ]2020-03-NGS_IntroForEdM.pdf2023-01-07 18:51 4.1M 
[ ]2022-03-NGS_IntroForEdM.pdf2023-01-07 18:51 3.8M 
[ ]2022-03-NGS_IntroForEdM.pptx2023-01-07 18:51 3.9M 
[ ]2022-03-ProteinStructurePrediction_CaitieMcCafferty.pdf2023-01-07 18:51 2.8M 
[ ]2023-02-NGS_IntroForEdM.pdf2023-02-28 08:42 3.9M 
[ ]2001967Slides-FINAL.ppt2023-01-07 18:51 1.2M 
[ ]AMLALLclassification.pdf2023-01-07 18:51 470K 
[ ]Affy1.pdf2023-01-07 18:51 1.4M 
[ ]Affy2.pdf2023-01-07 18:51 1.3M 
[ ]AlignAce.pdf2023-01-07 18:51 888K 
[ ]AssessORF.pdf2023-01-07 18:51 918K 
[ ]BCH364C-394P-Spring2022-SequenceAlignment.pdf2023-01-07 18:51 1.4M 
[ ]BCH364C-394P-Spring2022-SequenceAlignment.pptx2023-01-07 18:51 8.6M 
[ ]BCH364C-394P-Spring2023-SequenceAlignment.pdf2023-01-16 16:37 1.2M 
[ ]BCH364C-394P-Spring2023-SequenceAlignment.pptx2023-01-16 16:37 8.2M 
[ ]BCH364C-394P_ProblemSet1_Spring2022.pdf2023-01-07 18:51 44K 
[ ]BCH364C-394P_ProblemSet1_Spring2023.pdf2023-01-16 16:37 44K 
[ ]BCH394P-364C-BLAST-Spring2022.pdf2023-01-07 18:51 567K 
[ ]BCH394P-364C-BLAST-Spring2022.ppt2023-01-07 18:51 2.0M 
[ ]BCH394P-364C-BLAST-Spring2023.pdf2023-01-25 12:06 344K 
[ ]BCH394P-364C-BLAST-Spring2023.ppt2023-01-25 12:07 771K 
[ ]BCH394P-364C-BiologicalDatabases-Spring2022.pdf2023-01-07 18:51 136K 
[ ]BCH394P-364C-BiologicalDatabases-Spring2022.pptx2023-01-07 18:51 136K 
[ ]BCH394P-364C-BiologicalDatabases-Spring2023.pdf2023-01-29 17:04 144K 
[ ]BCH394P-364C-BiologicalDatabases-Spring2023.pptx2023-01-29 17:04 126K 
[ ]BCH394P-364C-GeneFinding-Spring2022.pdf2023-01-07 18:52 3.6M 
[ ]BCH394P-364C-GeneFinding-Spring2022.pptx2023-01-07 18:52 7.7M 
[ ]BCH394P-364C-GeneFinding-Spring2023.pdf2023-02-13 16:54 3.4M 
[ ]BCH394P-364C-GeneFinding-Spring2023.pptx2023-02-13 16:54 7.7M 
[ ]BCH394P-364C-GenomeAssembly_Spring2022.pdf2023-01-07 18:52 2.5M 
[ ]BCH394P-364C-GenomeAssembly_Spring2022.pptx2023-01-07 18:52 6.6M 
[ ]BCH394P-364C-GenomeAssembly_Spring2023.pdf2023-02-17 18:38 2.4M 
[ ]BCH394P-364C-GenomeAssembly_Spring2023.pptx2023-02-17 18:38 6.6M 
[ ]BCH394P-364C-HMMs-Spring2023.pdf2023-01-07 18:52 700K 
[ ]BCH394P-364C-HMMs-Spring2023.pptx2023-01-07 18:52 1.4M 
[ ]BCH394P-364C-IntroAndRosalind-Spring2022.pdf2023-01-07 18:52 1.5M 
[ ]BCH394P-364C-IntroAndRosalind-Spring2022.pptx2023-01-07 18:52 7.6M 
[ ]BCH394P-364C-IntroAndRosalind-Spring2023.pdf2023-01-07 18:58 1.8M 
[ ]BCH394P-364C-IntroAndRosalind-Spring2023.pptx2023-01-07 18:58 19M 
[ ]BCH394P-364C-PythonPrimer-Spring2022.pdf2023-01-07 18:52 375K 
[ ]BCH394P-364C-PythonPrimer-Spring2022.pptx2023-01-07 18:52 1.0M 
[ ]BCH394P-364C-PythonPrimer-Spring2023.pdf2023-01-07 20:04 468K 
[ ]BCH394P-364C-PythonPrimer-Spring2023.pptx2023-01-07 20:04 1.1M 
[ ]BCH394P-364C_Motifs_Spring2022.pdf2023-01-07 18:52 1.1M 
[ ]BCH394P-364C_Motifs_Spring2022.pptx2023-01-07 18:52 2.3M 
[ ]BCH394P-364C_Motifs_Spring2023.pdf2023-03-01 17:48 1.1M 
[ ]BCH394P-364C_Motifs_Spring2023.pptx2023-03-01 17:48 2.3M 
[ ]BCH394P-364C_Networks_Spring2022.pdf2023-01-07 18:52 7.2M 
[ ]BCH394P-364C_Networks_Spring2023.pdf2023-04-04 10:30 7.2M 
[ ]BCH394P-364C_Networks_Spring2023.pptx2023-04-04 10:30 29M 
[ ]BCH394P-364C_PCA_Spring2022.pdf2023-01-07 18:52 827K 
[ ]BCH394P-364C_PCA_Spring2022.pptx2023-01-07 18:52 2.9M 
[ ]BCH394P-364C_PCA_Spring2023.pdf2023-03-28 09:54 827K 
[ ]BCH394P-364C_PCA_Spring2023.pptx2023-03-28 09:54 2.9M 
[ ]BCH394P-364C_Phenologs_Spring2022.pdf2023-01-07 18:52 2.0M 
[ ]BCH394P-364C_Phenologs_Spring2022.pptx2023-01-07 18:52 19M 
[ ]BCH394P-364C_Phenologs_Spring2023.pdf2023-04-05 18:42 1.9M 
[ ]BCH394P-364C_Phenologs_Spring2023.pptx2023-04-05 18:42 19M 
[ ]BCH394P-364C_ProblemSet2_Spring2022.doc2023-01-07 18:52 83K 
[ ]BCH394P-364C_ProblemSet2_Spring2022.pdf2023-01-07 18:52 59K 
[ ]BCH394P-364C_ProblemSet2_Spring2023.pdf2023-02-08 12:22 59K 
[ ]BCH394P-364C_Spring2022_syllabus.pdf2023-01-07 18:52 60K 
[ ]BCH394P-364C_Spring2023_syllabus.pdf2023-01-17 13:43 59K 
[ ]BCH394P-364C_SyntheticBio_Spring2022.pdf2023-01-07 18:52 6.0M 
[ ]BCH394P-364C_SyntheticBio_Spring2022.ppt2023-01-07 18:52 20M 
[ ]BCH394P-364C_SyntheticBio_Spring2023.pdf2023-04-10 15:41 5.1M 
[ ]BCH394P-364C_SyntheticBio_Spring2023.pptx2023-04-10 15:42 24M 
[ ]BCH394P_364C_Classifiers_Spring2022.pdf2023-01-07 18:52 1.2M 
[ ]BCH394P_364C_Classifiers_Spring2022.ppt2023-01-07 18:52 9.8M 
[ ]BCH394P_364C_Classifiers_Spring2023.pdf2023-03-28 10:09 1.2M 
[ ]BCH394P_364C_Classifiers_Spring2023.ppt2023-03-28 09:55 9.8M 
[ ]BCH394P_364C_Classifiers_Spring2023.pptx2023-03-28 10:09 9.6M 
[ ]BCH394P_364C_LargeScaleExperiments_Spring2022.pdf2023-01-07 18:52 2.6M 
[ ]BCH394P_364C_LargeScaleExperiments_Spring2022.pptx2023-01-07 18:52 5.6M 
[ ]BCH394P_364C_LargeScaleExperiments_Spring2023.pdf2023-03-07 10:17 2.6M 
[ ]BCH394P_364C_LargeScaleExperiments_Spring2023.pptx2023-03-07 10:17 6.3M 
[ ]BLAST.pdf2023-01-07 18:52 533K 
[ ]BLOSUM62Miscalculations.pdf2023-01-07 18:52 182K 
[ ]BLOSUM_paper.pdf2023-01-07 18:52 1.0M 
[ ]BWApaper.pdf2023-01-07 18:52 258K 
[ ]BacterialPhotography.pdf2023-01-07 18:51 297K 
[ ]BayesPrimer-NatMethods.pdf2023-01-07 18:51 291K 
[ ]Bcelllymphoma.pdf2023-01-07 18:51 588K 
[ ]BioinformaticsClass_sp2017.pdf2023-01-07 18:52 948K 
[ ]BioinformaticsClass_sp2017.pptx2023-01-07 18:52 3.5M 
[ ]Broad-Cal-Decision-on-Motions.pdf2023-01-07 18:52 411K 
[ ]BurgeKarlin-main.pdf2023-01-07 18:52 385K 
[ ]ChIP-chipReview.pdf2023-01-07 18:52 617K 
[ ]ChIP-profiling-review.pdf2023-04-04 10:30 2.3M 
[ ]ChiPSeqReview.pdf2023-01-07 18:52 961K 
[ ]ChurchOmicsEditorial.pdf2023-01-07 18:52 513K 
[ ]CiliaPhyloProfiles.pdf2023-01-07 18:52 1.6M 
[ ]ClaireMcWhite-BCH394p-364c_2022.pdf2023-01-07 18:52 1.0M 
[ ]CompleteHumanGenomeSequence.pdf2023-01-07 18:52 2.6M 
[ ]ComputersMarsOrganismsVenus.pdf2023-01-07 18:52 141K 
[IMG]DDD-Figure2.jpg2023-01-07 18:52 64K 
[ ]DNASeqOverview.pdf2023-01-07 18:52 1.0M 
[ ]DeBruijnPrimer.pdf2023-01-07 18:52 416K 
[ ]DeBruijnSupplement.pdf2023-01-07 18:52 140K 
[ ]DeRisi.pdf2023-01-07 18:52 643K 
[ ]DeepLearningPfamDomains.pdf2023-01-07 18:52 2.6M 
[TXT]Dinuc_in_python.txt2023-01-07 18:52 815  
[ ]ESTs.pdf2023-01-07 18:52 1.5M 
[ ]EVcouplings.pdf2023-01-07 18:52 1.4M 
[TXT]Ecoli_genome.txt2023-01-07 18:52 4.5M 
[ ]EdgeDetector.pdf2023-01-07 18:52 359K 
[IMG]EllingtonDNAFab.jpg2023-01-07 18:52 274K 
[ ]EukGeneAnnotation.pdf2023-01-07 18:52 502K 
[ ]EuropeSNPs.pdf2023-01-07 18:52 2.0M 
[ ]EuropeanGenesPCA.pdf2023-01-07 18:52 2.1M 
[IMG]FactAndFictionInAlignment.png2023-01-07 18:52 544K 
[ ]Fedoroff.pdf2023-01-07 18:52 622K 
[ ]FetalAneuploidyDiagnostics.pdf2023-01-07 18:52 377K 
[ ]FetalAneuploidyTrial.pdf2023-01-07 18:52 305K 
[ ]FuzzyK-Means.pdf2023-01-07 18:52 3.5M 
[ ]GALPAS.xls2023-01-07 18:52 119K 
[ ]GeneDossierAssignment.pdf2023-01-07 18:52 79K 
[ ]GeneMark.hmm.pdf2023-01-07 18:52 130K 
[ ]GeneMark.pdf2023-01-07 18:52 734K 
[ ]GenomeTransplantation.pdf2023-01-07 18:52 571K 
[ ]GibbsSampling.pdf2023-01-07 18:52 2.0M 
[ ]GoodEnoughPracticesInScientificComputing.pdf2023-01-07 18:52 2.0M 
[ ]GuestLecture_NGS.pdf2023-01-07 18:52 21M 
[ ]GuestLecture_Orthology_Spring2017.pdf2023-01-07 18:52 948K 
[ ]GuestLecture_Orthology_Spring2017.pptx2023-01-07 18:52 3.5M 
[TXT]Hinfluenzae.txt2023-01-07 18:52 1.8M 
[ ]HumanMetabolicReactionNetwork-2013.pdf2023-01-07 18:52 1.7M 
[ ]IntroToPCA.pdf2023-01-07 18:52 491K 
[ ]IntroToProteomics2-03-24-2022.pdf2023-01-07 18:52 4.9M 
[ ]JCVI-1.0.pdf2023-01-07 18:52 506K 
[ ]K-means-Example.ppt2023-01-07 18:52 73K 
[ ]LanderGolubPatentOnExpressionClassification.pdf2023-03-28 09:55 3.5M 
[ ]MachineLearningReview.pdf2023-01-07 18:52 251K 
[ ]Mgene12023-01-07 18:52 60K 
[ ]Mgene22023-01-07 18:52 60K 
[ ]Mgene32023-01-07 18:52 60K 
[ ]MichaelHoffman.pdf2023-01-07 18:52 476K 
[ ]MinimalMycoplasma-2016.pdf2023-01-07 18:52 1.7M 
[ ]MinionHumanGenome.pdf2023-01-07 18:52 1.2M 
[ ]MultiplexDeBruijnGraphs.pdf2023-01-07 18:52 1.6M 
[TXT]MysteryGene1.txt2023-01-07 18:52 912  
[TXT]MysteryGene2.txt2023-01-07 18:52 1.7K 
[TXT]MysteryGene3.txt2023-01-07 18:52 748  
[ ]NBTPrimer-BLOSUM.pdf2023-01-07 18:52 187K 
[ ]NBTPrimer-Bayes.pdf2023-01-07 18:52 91K 
[ ]NBTPrimer-DynamicProgramming.pdf2023-01-07 18:52 198K 
[ ]NBTPrimer-HMMs.pdf2023-01-07 18:52 189K 
[ ]NBTPrimer-MicroarrayClustering.pdf2023-01-07 18:52 325K 
[ ]NBTPrimer-NetworkVisualization.pdf2023-01-07 18:52 355K 
[ ]NBT_primer_PCA.pdf2023-01-07 18:52 289K 
[ ]NetworkBiologyReview.pdf2023-01-07 18:52 3.6M 
[ ]NewCellFromChemicalGenome.SOM.pdf2023-01-07 18:52 10M 
[ ]NewCellFromChemicalGenome.pdf2023-01-07 18:52 611K 
[TXT]NewEcoli_genome.txt2023-01-07 18:52 4.6M 
[ ]Nucl. Acids Res.-2014-Kheradpour-2976-87.pdf2023-01-07 18:52 1.3M 
[ ]OMA.pdf2023-01-07 18:52 288K 
[ ]OneStepAssemblyInYeast.pdf2023-01-07 18:52 689K 
[IMG]PHGinMoMA.png2023-01-07 18:52 1.5M 
[ ]PNAS-2014-Lee-1313039111.pdf2023-01-07 18:52 2.0M 
[ ]PNAS_Phenologs_2010.pdf2023-01-07 18:52 1.1M 
[ ]PNAS_Phenologs_2010_Supplement.pdf2023-01-07 18:52 1.3M 
[ ]PNAS_phylogenetic_profiles.pdf2023-01-07 18:52 98K 
[ ]PPIsAndDiseaseReview.pdf2023-01-07 18:52 738K 
[ ]PrincipalComponentAnalysis.docx2023-01-07 18:52 247K 
[ ]ProblemSet3_2020.pdf2023-01-07 18:52 32K 
[ ]ProblemSet3_2022.pdf2023-01-07 18:52 30K 
[ ]ProblemSet3_2023.pdf2023-03-06 17:32 30K 
[ ]ProfileAnalysis.pdf2023-01-07 18:52 803K 
[ ]RosettaOverview.pdf2023-01-07 18:52 5.2M 
[ ]RosettaReview.pdf2023-03-06 17:58 2.9M 
[ ]SAGE.pdf2023-01-07 18:52 1.0M 
[ ]SOM-geneexpression.pdf2023-01-07 18:52 364K 
[ ]Science-2014-Annaluru-55-8.pdf2023-01-07 18:52 1.1M 
[ ]Science-2014-Bohannon-475.pdf2023-01-07 18:52 153K 
[ ]Science_Zack.pdf2023-01-07 18:52 233K 
[ ]Sonnhammer2002TiG.pdf2023-01-07 18:52 29K 
[ ]Spellman.pdf2023-01-07 18:52 1.5M 
[ ]SplicingAI-jaganathan2019.pdf2023-01-07 18:52 4.5M 
[ ]StatisticsPrimer.pdf2023-01-07 18:52 921K 
[ ]StrainsFromYeastGenomicClones.pdf2023-01-07 18:52 235K 
[ ]StringGraphAssembly.pdf2023-01-07 18:52 163K 
[ ]Study-2017-Nature.pdf2023-01-07 18:52 2.6M 
[VID]Supplemental Movie 1.m4v2023-01-07 18:52 2.5M 
[VID]Supplemental Movie 2.m4v2023-01-07 18:52 2.4M 
[VID]Supplemental Movie 3.m4v2023-01-07 18:52 2.2M 
[ ]SyntheticFlagellum.pdf2023-01-07 18:52 1.3M 
[TXT]Taquaticus.txt2023-01-07 18:52 2.1M 
[TXT]Tvolcanium_genome.txt2023-01-07 18:52 1.5M 
[ ]UTiGEM2012.pdf2023-01-07 18:52 3.3M 
[ ]WalktrapAlgorithm.pdf2023-01-07 18:52 323K 
[ ]WekaIntroChapter.pdf2023-01-07 18:52 652K 
[ ]YeastSGA-2016.pdf2023-01-07 18:52 3.8M 
[ ]YeastSynthCsome.pdf2023-01-07 18:52 635K 
[ ]bio337_feb18_ngs.pdf2023-01-07 18:52 21M 
[ ]codinghour_flyer_spring2022.pdf2023-01-07 18:52 591K 
[ ]eisen.pdf2023-01-07 18:52 934K 
[ ]fastq_runid_fbea4bea7410dfda4bf285ff8f07fef0c49a6b4f_0.fastq.gz2023-01-07 18:52 30M 
[ ]fastq_runid_fbea4bea7410dfda4bf285ff8f07fef0c49a6b4f_1.fastq.gz2023-01-07 18:52 30M 
[ ]fastq_runid_fbea4bea7410dfda4bf285ff8f07fef0c49a6b4f_2.fastq.gz2023-01-07 18:52 12M 
[ ]humap2_protein_complex_map_20200821.cys2023-01-07 18:52 7.9M 
[ ]ismb94.pdf2023-01-07 18:52 167K 
[ ]journal.pbio.1001014.pdf2023-01-07 18:52 752K 
[VID]media-2.mp42023-01-07 18:52 927K 
[ ]nature_review_2000.pdf2023-01-07 18:52 222K 
[ ]nbt.2510.pdf2023-01-07 18:52 539K 
[ ]nbt0406-423-primer-whataremotifs.pdf2023-01-07 18:52 211K 
[ ]nbt0806-959-primer-howdoesmotifdiscoverywork.pdf2023-01-07 18:52 155K 
[TXT]presentations.txt2023-01-07 18:52 1.5K 
[ ]repressilator.pdf2023-01-07 18:52 728K 
[ ]s41586-021-04332-2.pdf2023-01-07 18:52 20M 
[ ]sciruby-slide.pdf2023-01-07 18:52 176K 
[ ]soluble_sequences2023-01-07 18:52 328K 
[ ]state_sequences2023-01-07 18:52 410K 
[ ]structbio_lecture_BCH339N_2016.pptx2023-01-07 18:52 13M 
[ ]synthetic-biology-genome-engineering-2-2014.ppt2023-01-07 18:52 1.0M 
[ ]tSNE.pdf2023-01-07 18:52 3.5M 
[VID]tastiger1_bb.mp42023-01-07 18:52 5.8M 
[ ]transmembrane_sequences2023-01-07 18:52 91K 
[ ]vonmering.pdf2023-01-07 18:52 164K 
[ ]yeast_aaseqs2023-01-07 18:52 3.0M 
[TXT]yeast_cofractionationdata.txt2023-01-07 18:52 1.0M 
[ ]yeast_microarraydata2023-01-07 18:52 11M 
[TXT]yeast_microarraydata2.txt2023-01-07 18:52 11M 
[TXT]yeast_microarraydata3.txt2023-01-07 18:52 11M 
[ ]yeast_phyloprofiles2023-01-07 18:52 6.0M 
[TXT]yeast_phyloprofiles2.txt2023-01-07 18:52 5.9M 
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